RNA–Protein interactions for RNA: ENST00000516513.1

RN7SKP244-201, Transcript of RNA, 7SK small nuclear pseudogene 244, humanhuman

BASIC

Gene RN7SKP244, Length 307 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP244-201ENST00000516513 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
RN7SKP244-201ENST00000516513 NUBP1P53384 320 aa12.01□□□□□ -0.49
RN7SKP244-201ENST00000516513 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
RN7SKP244-201ENST00000516513 MS4A3Q96HJ5 214 aa11.97□□□□□ -0.49
RN7SKP244-201ENST00000516513 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
RN7SKP244-201ENST00000516513 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
RN7SKP244-201ENST00000516513 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
RN7SKP244-201ENST00000516513 MAP3K13O43283 966 aa11.89□□□□□ -0.51
RN7SKP244-201ENST00000516513 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
RN7SKP244-201ENST00000516513 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP244-201ENST00000516513 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
RN7SKP244-201ENST00000516513 LHX8Q68G74 356 aa11.8□□□□□ -0.52
RN7SKP244-201ENST00000516513 ASTLQ6HA08 431 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP244-201ENST00000516513 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
RN7SKP244-201ENST00000516513 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
RN7SKP244-201ENST00000516513 ATMINO43313 823 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP244-201ENST00000516513 PYGBP11216 843 aa11.77□□□□□ -0.53
RN7SKP244-201ENST00000516513 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
RN7SKP244-201ENST00000516513 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
RN7SKP244-201ENST00000516513 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP244-201ENST00000516513 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
RN7SKP244-201ENST00000516513 ATN1P54259 1190 aaPredicted RBP11.74□□□□□ -0.53
RN7SKP244-201ENST00000516513 GSE1Q14687 1217 aa11.74□□□□□ -0.53
RN7SKP244-201ENST00000516513 TIE1P35590 1138 aa11.72□□□□□ -0.53
RN7SKP244-201ENST00000516513 TTLL13PA6NNM8 815 aa11.69□□□□□ -0.54
RN7SKP244-201ENST00000516513 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
RN7SKP244-201ENST00000516513 SLC39A7Q92504 469 aa11.68□□□□□ -0.54
RN7SKP244-201ENST00000516513 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
RN7SKP244-201ENST00000516513 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
RN7SKP244-201ENST00000516513 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
RN7SKP244-201ENST00000516513 C7P10643 843 aa11.65□□□□□ -0.54
RN7SKP244-201ENST00000516513 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
RN7SKP244-201ENST00000516513 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
RN7SKP244-201ENST00000516513 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
RN7SKP244-201ENST00000516513 ZNF467Q7Z7K2 595 aaPredicted RBP11.58□□□□□ -0.56
RN7SKP244-201ENST00000516513 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
RN7SKP244-201ENST00000516513 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
RN7SKP244-201ENST00000516513 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
RN7SKP244-201ENST00000516513 OTUD5Q96G74 571 aa11.53□□□□□ -0.56
RN7SKP244-201ENST00000516513 IER5LQ5T953 404 aa11.52□□□□□ -0.57
RN7SKP244-201ENST00000516513 SEC24BO95487 1268 aa11.51□□□□□ -0.57
RN7SKP244-201ENST00000516513 PSEN1P49768 467 aa11.49□□□□□ -0.57
RN7SKP244-201ENST00000516513 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
RN7SKP244-201ENST00000516513 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
RN7SKP244-201ENST00000516513 PLCG2P16885 1265 aa11.43□□□□□ -0.58
RN7SKP244-201ENST00000516513 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
RN7SKP244-201ENST00000516513 MAMSTRQ6ZN01 415 aa11.41□□□□□ -0.58
RN7SKP244-201ENST00000516513 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
RN7SKP244-201ENST00000516513 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
RN7SKP244-201ENST00000516513 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
RN7SKP244-201ENST00000516513 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
RN7SKP244-201ENST00000516513 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
RN7SKP244-201ENST00000516513 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
RN7SKP244-201ENST00000516513 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
RN7SKP244-201ENST00000516513 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
RN7SKP244-201ENST00000516513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
RN7SKP244-201ENST00000516513 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
RN7SKP244-201ENST00000516513 PKD2Q13563 968 aa11.3□□□□□ -0.6
RN7SKP244-201ENST00000516513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP244-201ENST00000516513 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP244-201ENST00000516513 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP244-201ENST00000516513 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
RN7SKP244-201ENST00000516513 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
RN7SKP244-201ENST00000516513 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
RN7SKP244-201ENST00000516513 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
RN7SKP244-201ENST00000516513 RGL2O15211 777 aa11.21□□□□□ -0.61
RN7SKP244-201ENST00000516513 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
RN7SKP244-201ENST00000516513 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
RN7SKP244-201ENST00000516513 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
RN7SKP244-201ENST00000516513 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
RN7SKP244-201ENST00000516513 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
RN7SKP244-201ENST00000516513 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP244-201ENST00000516513 STK24Q9Y6E0 443 aa11.15□□□□□ -0.62
RN7SKP244-201ENST00000516513 STK25O00506 426 aa11.14□□□□□ -0.63
RN7SKP244-201ENST00000516513 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP244-201ENST00000516513 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
RN7SKP244-201ENST00000516513 SOX12O15370 315 aa11.12□□□□□ -0.63
RN7SKP244-201ENST00000516513 PHF8Q9UPP1 1060 aa11.12□□□□□ -0.63
RN7SKP244-201ENST00000516513 POTEMA6NI47 508 aa11.1□□□□□ -0.63
RN7SKP244-201ENST00000516513 G3V3G9 751 aa11.1□□□□□ -0.63
RN7SKP244-201ENST00000516513 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
RN7SKP244-201ENST00000516513 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
RN7SKP244-201ENST00000516513 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
RN7SKP244-201ENST00000516513 NLRP6P59044 892 aa11.04□□□□□ -0.64
RN7SKP244-201ENST00000516513 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
RN7SKP244-201ENST00000516513 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
RN7SKP244-201ENST00000516513 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
RN7SKP244-201ENST00000516513 ST18O60284 1047 aa11.02□□□□□ -0.65
RN7SKP244-201ENST00000516513 SNPHO15079 494 aa11□□□□□ -0.65
RN7SKP244-201ENST00000516513 HS6ST3Q8IZP7 471 aa10.96□□□□□ -0.65
RN7SKP244-201ENST00000516513 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
RN7SKP244-201ENST00000516513 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
RN7SKP244-201ENST00000516513 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
RN7SKP244-201ENST00000516513 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP244-201ENST00000516513 PPP1R37O75864 691 aa10.87□□□□□ -0.67
RN7SKP244-201ENST00000516513 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
RN7SKP244-201ENST00000516513 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
RN7SKP244-201ENST00000516513 DOK7Q18PE1 504 aa10.83□□□□□ -0.68
RN7SKP244-201ENST00000516513 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
RN7SKP244-201ENST00000516513 EMP3P54852 163 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms