RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 CHRM1P11229 460 aaPredicted RBP16.49■□□□□ 0.23
SNORA48.9-201ENST00000516419 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
SNORA48.9-201ENST00000516419 PYGBP11216 843 aa16.41■□□□□ 0.22
SNORA48.9-201ENST00000516419 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
SNORA48.9-201ENST00000516419 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
SNORA48.9-201ENST00000516419 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
SNORA48.9-201ENST00000516419 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
SNORA48.9-201ENST00000516419 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
SNORA48.9-201ENST00000516419 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
SNORA48.9-201ENST00000516419 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
SNORA48.9-201ENST00000516419 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
SNORA48.9-201ENST00000516419 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
SNORA48.9-201ENST00000516419 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
SNORA48.9-201ENST00000516419 ZRANB1Q9UGI0 708 aa16.25■□□□□ 0.19
SNORA48.9-201ENST00000516419 HS6ST3Q8IZP7 471 aa16.24■□□□□ 0.19
SNORA48.9-201ENST00000516419 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
SNORA48.9-201ENST00000516419 PLCB2Q00722 1185 aa16.23■□□□□ 0.19
SNORA48.9-201ENST00000516419 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
SNORA48.9-201ENST00000516419 SGIP1Q9BQI5 828 aa16.22■□□□□ 0.19
SNORA48.9-201ENST00000516419 C19orf67A6NJJ6 358 aa16.21■□□□□ 0.19
SNORA48.9-201ENST00000516419 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
SNORA48.9-201ENST00000516419 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
SNORA48.9-201ENST00000516419 STK25O00506 426 aa16.15■□□□□ 0.18
SNORA48.9-201ENST00000516419 PCDHB13Q9Y5F0 798 aa16.15■□□□□ 0.18
SNORA48.9-201ENST00000516419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
SNORA48.9-201ENST00000516419 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
SNORA48.9-201ENST00000516419 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
SNORA48.9-201ENST00000516419 PCDHB8Q9UN66 801 aa16.14■□□□□ 0.17
SNORA48.9-201ENST00000516419 MAP3K13O43283 966 aa16.13■□□□□ 0.17
SNORA48.9-201ENST00000516419 PDAP1Q13442 181 aaKnown RBP16.11■□□□□ 0.17
SNORA48.9-201ENST00000516419 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
SNORA48.9-201ENST00000516419 PAXIP1Q6ZW49 1069 aaPredicted RBP16.08■□□□□ 0.16
SNORA48.9-201ENST00000516419 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
SNORA48.9-201ENST00000516419 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.16
SNORA48.9-201ENST00000516419 STK24Q9Y6E0 443 aa16.07■□□□□ 0.16
SNORA48.9-201ENST00000516419 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
SNORA48.9-201ENST00000516419 HAX1O00165 279 aa16.05■□□□□ 0.16
SNORA48.9-201ENST00000516419 PSEN1P49768 467 aa16.04■□□□□ 0.16
SNORA48.9-201ENST00000516419 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
SNORA48.9-201ENST00000516419 HAP1P54257 671 aaPredicted RBP15.99■□□□□ 0.15
SNORA48.9-201ENST00000516419 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
SNORA48.9-201ENST00000516419 MS4A3Q96HJ5 214 aa15.93■□□□□ 0.14
SNORA48.9-201ENST00000516419 CLCN6P51797 869 aa15.91■□□□□ 0.14
SNORA48.9-201ENST00000516419 EVX2Q03828 476 aa15.91■□□□□ 0.14
SNORA48.9-201ENST00000516419 POTEHQ6S545 545 aa15.91■□□□□ 0.14
SNORA48.9-201ENST00000516419 GTPBP6O43824 516 aaPredicted RBP15.88■□□□□ 0.13
SNORA48.9-201ENST00000516419 RYDENQ9NUL5 291 aaKnown RBP15.88■□□□□ 0.13
SNORA48.9-201ENST00000516419 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
SNORA48.9-201ENST00000516419 TRPC6Q9Y210 931 aa15.82■□□□□ 0.12
SNORA48.9-201ENST00000516419 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
SNORA48.9-201ENST00000516419 TIE1P35590 1138 aa15.8■□□□□ 0.12
SNORA48.9-201ENST00000516419 GALR2O43603 387 aaPredicted RBP15.79■□□□□ 0.12
SNORA48.9-201ENST00000516419 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
SNORA48.9-201ENST00000516419 EFCAB3Q8N7B9 438 aa15.78■□□□□ 0.12
SNORA48.9-201ENST00000516419 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.12
SNORA48.9-201ENST00000516419 SOX12O15370 315 aa15.76■□□□□ 0.11
SNORA48.9-201ENST00000516419 MFRPQ9BY79 579 aa15.74■□□□□ 0.11
SNORA48.9-201ENST00000516419 GOLGA2Q08379 1002 aa15.73■□□□□ 0.11
SNORA48.9-201ENST00000516419 TTLL13PA6NNM8 815 aa15.71■□□□□ 0.11
SNORA48.9-201ENST00000516419 BMP2KQ9NSY1 1161 aaPredicted RBP15.71■□□□□ 0.11
SNORA48.9-201ENST00000516419 NLRP6P59044 892 aa15.7■□□□□ 0.1
SNORA48.9-201ENST00000516419 GABBR2O75899 941 aa15.66■□□□□ 0.1
SNORA48.9-201ENST00000516419 MKRN3Q13064 507 aaKnown RBP15.66■□□□□ 0.1
SNORA48.9-201ENST00000516419 PHF8Q9UPP1 1060 aa15.66■□□□□ 0.1
SNORA48.9-201ENST00000516419 FBXO22Q8NEZ5 403 aa15.65■□□□□ 0.1
SNORA48.9-201ENST00000516419 KDM2AQ9Y2K7 1162 aa15.63■□□□□ 0.09
SNORA48.9-201ENST00000516419 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
SNORA48.9-201ENST00000516419 ASTLQ6HA08 431 aaPredicted RBP15.58■□□□□ 0.08
SNORA48.9-201ENST00000516419 ATMINO43313 823 aaPredicted RBP15.57■□□□□ 0.08
SNORA48.9-201ENST00000516419 ATN1P54259 1190 aaPredicted RBP15.56■□□□□ 0.08
SNORA48.9-201ENST00000516419 PPP1R37O75864 691 aa15.53■□□□□ 0.08
SNORA48.9-201ENST00000516419 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
SNORA48.9-201ENST00000516419 DCBLD2Q96PD2 775 aa15.51■□□□□ 0.07
SNORA48.9-201ENST00000516419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNORA48.9-201ENST00000516419 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
SNORA48.9-201ENST00000516419 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
SNORA48.9-201ENST00000516419 IER5LQ5T953 404 aa15.47■□□□□ 0.07
SNORA48.9-201ENST00000516419 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
SNORA48.9-201ENST00000516419 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
SNORA48.9-201ENST00000516419 OCEL1Q9H607 264 aa15.39■□□□□ 0.05
SNORA48.9-201ENST00000516419 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
SNORA48.9-201ENST00000516419 PDCD7Q8N8D1 485 aaKnown RBP15.37■□□□□ 0.05
SNORA48.9-201ENST00000516419 PLCG2P16885 1265 aa15.34■□□□□ 0.05
SNORA48.9-201ENST00000516419 DPY19L2Q6NUT2 758 aa15.34■□□□□ 0.05
SNORA48.9-201ENST00000516419 SLC39A7Q92504 469 aa15.34■□□□□ 0.05
SNORA48.9-201ENST00000516419 WDR70Q9NW82 654 aa15.32■□□□□ 0.04
SNORA48.9-201ENST00000516419 POTEIP0CG38 1075 aa15.31■□□□□ 0.04
SNORA48.9-201ENST00000516419 BCANQ96GW7 911 aa15.31■□□□□ 0.04
SNORA48.9-201ENST00000516419 SEC24BO95487 1268 aa15.3■□□□□ 0.04
SNORA48.9-201ENST00000516419 C7P10643 843 aa15.3■□□□□ 0.04
SNORA48.9-201ENST00000516419 PDE4AP27815 886 aa15.27■□□□□ 0.04
SNORA48.9-201ENST00000516419 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
SNORA48.9-201ENST00000516419 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
SNORA48.9-201ENST00000516419 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
SNORA48.9-201ENST00000516419 G3V3G9 751 aa15.24■□□□□ 0.03
SNORA48.9-201ENST00000516419 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
SNORA48.9-201ENST00000516419 BOLA1Q9Y3E2 137 aa15.24■□□□□ 0.03
SNORA48.9-201ENST00000516419 CRISPLD2Q9H0B8 497 aa15.23■□□□□ 0.03
SNORA48.9-201ENST00000516419 METRNQ9UJH8 293 aa15.23■□□□□ 0.03
SNORA48.9-201ENST00000516419 TMEM121BQ9BXQ6 578 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms