RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 NUBP1P53384 320 aa6.78□□□□□ -1.32
SCARNA15.2-201ENST00000516409 RIOK3O14730 519 aaKnown RBP6.76□□□□□ -1.33
SCARNA15.2-201ENST00000516409 DCAF8Q5TAQ9 597 aa6.76□□□□□ -1.33
SCARNA15.2-201ENST00000516409 GTPBP6O43824 516 aaPredicted RBP6.75□□□□□ -1.33
SCARNA15.2-201ENST00000516409 STK25O00506 426 aa6.73□□□□□ -1.33
SCARNA15.2-201ENST00000516409 POTEDQ86YR6 584 aa6.71□□□□□ -1.34
SCARNA15.2-201ENST00000516409 VGFO15240 615 aaPredicted RBP6.7□□□□□ -1.34
SCARNA15.2-201ENST00000516409 FAM212AQ96EL1 285 aa6.7□□□□□ -1.34
SCARNA15.2-201ENST00000516409 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
SCARNA15.2-201ENST00000516409 CREBZFQ9NS37 354 aa6.68□□□□□ -1.34
SCARNA15.2-201ENST00000516409 STK24Q9Y6E0 443 aa6.68□□□□□ -1.34
SCARNA15.2-201ENST00000516409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.67□□□□□ -1.34
SCARNA15.2-201ENST00000516409 TULP1O00294 542 aaPredicted RBP6.67□□□□□ -1.34
SCARNA15.2-201ENST00000516409 ZFP91Q96JP5 570 aaPredicted RBP6.67□□□□□ -1.34
SCARNA15.2-201ENST00000516409 BCL11BQ9C0K0 894 aaPredicted RBP6.67□□□□□ -1.34
SCARNA15.2-201ENST00000516409 MNX1P50219 401 aaPredicted RBP6.66□□□□□ -1.34
SCARNA15.2-201ENST00000516409 RASEFQ8IZ41 740 aa6.66□□□□□ -1.34
SCARNA15.2-201ENST00000516409 SPDYE1Q8NFV5 336 aaPredicted RBP6.66□□□□□ -1.34
SCARNA15.2-201ENST00000516409 CLEC11AQ9Y240 323 aa6.66□□□□□ -1.34
SCARNA15.2-201ENST00000516409 PYGBP11216 843 aa6.64□□□□□ -1.35
SCARNA15.2-201ENST00000516409 CHRM1P11229 460 aaPredicted RBP6.64□□□□□ -1.35
SCARNA15.2-201ENST00000516409 GTF3C3Q9Y5Q9 886 aa6.64□□□□□ -1.35
SCARNA15.2-201ENST00000516409 PRR29P0C7W0 189 aa6.63□□□□□ -1.35
SCARNA15.2-201ENST00000516409 SGIP1Q9BQI5 828 aa6.63□□□□□ -1.35
SCARNA15.2-201ENST00000516409 CACNB1Q02641 598 aaPredicted RBP6.6□□□□□ -1.35
SCARNA15.2-201ENST00000516409 RYDENQ9NUL5 291 aaKnown RBP6.6□□□□□ -1.35
SCARNA15.2-201ENST00000516409 AKT1S1Q96B36 256 aa6.59□□□□□ -1.35
SCARNA15.2-201ENST00000516409 CADPS2Q86UW7 1296 aa6.58□□□□□ -1.36
SCARNA15.2-201ENST00000516409 P3H3Q8IVL6 736 aa6.58□□□□□ -1.36
SCARNA15.2-201ENST00000516409 KCNV2Q8TDN2 545 aa6.57□□□□□ -1.36
SCARNA15.2-201ENST00000516409 TMEM132AQ24JP5 1023 aa6.56□□□□□ -1.36
SCARNA15.2-201ENST00000516409 REM2Q8IYK8 340 aaPredicted RBP6.56□□□□□ -1.36
SCARNA15.2-201ENST00000516409 RBM42Q9BTD8 480 aaKnown RBP6.55□□□□□ -1.36
SCARNA15.2-201ENST00000516409 LMOD2Q6P5Q4 547 aa6.54□□□□□ -1.36
SCARNA15.2-201ENST00000516409 WDR70Q9NW82 654 aa6.54□□□□□ -1.36
SCARNA15.2-201ENST00000516409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCARNA15.2-201ENST00000516409 TSPYL2Q9H2G4 693 aaPredicted RBP6.51□□□□□ -1.37
SCARNA15.2-201ENST00000516409 PITPNM1O00562 1244 aa6.5□□□□□ -1.37
SCARNA15.2-201ENST00000516409 ZNF467Q7Z7K2 595 aaPredicted RBP6.49□□□□□ -1.37
SCARNA15.2-201ENST00000516409 PCDHB8Q9UN66 801 aa6.49□□□□□ -1.37
SCARNA15.2-201ENST00000516409 PCDHB13Q9Y5F0 798 aa6.49□□□□□ -1.37
SCARNA15.2-201ENST00000516409 PDAP1Q13442 181 aaKnown RBP6.48□□□□□ -1.37
SCARNA15.2-201ENST00000516409 MFRPQ9BY79 579 aa6.48□□□□□ -1.37
SCARNA15.2-201ENST00000516409 CHADLQ6NUI6 762 aa6.47□□□□□ -1.37
SCARNA15.2-201ENST00000516409 ERICH6Q7L0X2 663 aa6.47□□□□□ -1.37
SCARNA15.2-201ENST00000516409 C14orf37Q86TY3 774 aa6.47□□□□□ -1.37
SCARNA15.2-201ENST00000516409 BRPF1P55201 1214 aaPredicted RBP6.46□□□□□ -1.38
SCARNA15.2-201ENST00000516409 PPP1R37O75864 691 aa6.44□□□□□ -1.38
SCARNA15.2-201ENST00000516409 PSEN1P49768 467 aa6.44□□□□□ -1.38
SCARNA15.2-201ENST00000516409 ZC3H15Q8WU90 426 aaKnown RBP6.43□□□□□ -1.38
SCARNA15.2-201ENST00000516409 ARXQ96QS3 562 aa6.43□□□□□ -1.38
SCARNA15.2-201ENST00000516409 SEMA3EO15041 775 aa6.41□□□□□ -1.38
SCARNA15.2-201ENST00000516409 NEUROD2Q15784 382 aa6.41□□□□□ -1.38
SCARNA15.2-201ENST00000516409 E2F4Q16254 413 aa6.41□□□□□ -1.38
SCARNA15.2-201ENST00000516409 ZNF579Q8NAF0 562 aaKnown RBP6.41□□□□□ -1.38
SCARNA15.2-201ENST00000516409 ARHGEF1Q92888 912 aaKnown RBP6.41□□□□□ -1.38
SCARNA15.2-201ENST00000516409 EFCAB3Q8N7B9 438 aa6.4□□□□□ -1.38
SCARNA15.2-201ENST00000516409 SLC24A3Q9HC58 644 aa6.4□□□□□ -1.38
SCARNA15.2-201ENST00000516409 FARP1Q9Y4F1 1045 aaPredicted RBP6.4□□□□□ -1.38
SCARNA15.2-201ENST00000516409 CCDC61Q9Y6R9 512 aa6.4□□□□□ -1.38
SCARNA15.2-201ENST00000516409 TESPA1A2RU30 521 aaPredicted RBP6.39□□□□□ -1.39
SCARNA15.2-201ENST00000516409 FBXO22Q8NEZ5 403 aa6.39□□□□□ -1.39
SCARNA15.2-201ENST00000516409 PHF8Q9UPP1 1060 aa6.39□□□□□ -1.39
SCARNA15.2-201ENST00000516409 CABP2Q9NPB3 220 aa6.38□□□□□ -1.39
SCARNA15.2-201ENST00000516409 NLRP6P59044 892 aa6.37□□□□□ -1.39
SCARNA15.2-201ENST00000516409 IFNL1Q8IU54 200 aa6.37□□□□□ -1.39
SCARNA15.2-201ENST00000516409 NCKAP5LQ9HCH0 1330 aa6.35□□□□□ -1.39
SCARNA15.2-201ENST00000516409 SOX12O15370 315 aa6.34□□□□□ -1.39
SCARNA15.2-201ENST00000516409 MAP3K13O43283 966 aa6.34□□□□□ -1.39
SCARNA15.2-201ENST00000516409 HOMEZQ8IX15 550 aa6.34□□□□□ -1.39
SCARNA15.2-201ENST00000516409 PRKAR2AP13861 404 aaKnown RBP6.33□□□□□ -1.4
SCARNA15.2-201ENST00000516409 LARP6Q9BRS8 491 aaKnown RBP6.33□□□□□ -1.4
SCARNA15.2-201ENST00000516409 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
SCARNA15.2-201ENST00000516409 ZMYND10O75800 440 aa6.32□□□□□ -1.4
SCARNA15.2-201ENST00000516409 KIF12Q96FN5 646 aa6.31□□□□□ -1.4
SCARNA15.2-201ENST00000516409 DAXXQ9UER7 740 aaPredicted RBP6.31□□□□□ -1.4
SCARNA15.2-201ENST00000516409 PAK3O75914 559 aaPredicted RBP6.3□□□□□ -1.4
SCARNA15.2-201ENST00000516409 PDE4AP27815 886 aa6.3□□□□□ -1.4
SCARNA15.2-201ENST00000516409 MFSD10Q14728 455 aa6.3□□□□□ -1.4
SCARNA15.2-201ENST00000516409 SMYD5Q6GMV2 418 aa6.3□□□□□ -1.4
SCARNA15.2-201ENST00000516409 MS4A4AQ96JQ5 239 aa6.3□□□□□ -1.4
SCARNA15.2-201ENST00000516409 CRISPLD2Q9H0B8 497 aa6.29□□□□□ -1.4
SCARNA15.2-201ENST00000516409 DDX27Q96GQ7 796 aaKnown RBP6.28□□□□□ -1.4
SCARNA15.2-201ENST00000516409 BARGINQ6ZT62 677 aa6.27□□□□□ -1.41
SCARNA15.2-201ENST00000516409 MLLT3P42568 568 aaPredicted RBP6.26□□□□□ -1.41
SCARNA15.2-201ENST00000516409 RBM26Q5T8P6 1007 aaKnown RBP6.26□□□□□ -1.41
SCARNA15.2-201ENST00000516409 GPBP1L1Q9HC44 474 aaPredicted RBP6.26□□□□□ -1.41
SCARNA15.2-201ENST00000516409 CAMK2BQ13554 666 aa6.25□□□□□ -1.41
SCARNA15.2-201ENST00000516409 ARIH1Q9Y4X5 557 aaPredicted RBP6.25□□□□□ -1.41
SCARNA15.2-201ENST00000516409 FXR2P51116 673 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCARNA15.2-201ENST00000516409 GPIHBP1Q8IV16 184 aa6.24□□□□□ -1.41
SCARNA15.2-201ENST00000516409 AK7Q96M32 723 aa6.24□□□□□ -1.41
SCARNA15.2-201ENST00000516409 KRI1Q8N9T8 703 aaKnown RBP6.23□□□□□ -1.41
SCARNA15.2-201ENST00000516409 PHF12Q96QT6 1004 aa6.23□□□□□ -1.41
SCARNA15.2-201ENST00000516409 GOLGA2Q08379 1002 aa6.22□□□□□ -1.41
SCARNA15.2-201ENST00000516409 ZRANB1Q9UGI0 708 aa6.22□□□□□ -1.41
SCARNA15.2-201ENST00000516409 IL27Q8NEV9 243 aa6.21□□□□□ -1.42
SCARNA15.2-201ENST00000516409 TMEM106CQ9BVX2 250 aa6.21□□□□□ -1.42
SCARNA15.2-201ENST00000516409 PPP1R15BQ5SWA1 713 aa6.2□□□□□ -1.42
SCARNA15.2-201ENST00000516409 KDM4CQ9H3R0 1056 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms