RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 FOXD4L1Q9NU39 408 aa2.58□□□□□ -2
SCARNA17.3-201ENST00000516381 POTEFA5A3E0 1075 aa2.56□□□□□ -2
SCARNA17.3-201ENST00000516381 ST18O60284 1047 aa2.56□□□□□ -2
SCARNA17.3-201ENST00000516381 MS4A3Q96HJ5 214 aa2.56□□□□□ -2
SCARNA17.3-201ENST00000516381 CREBZFQ9NS37 354 aa2.56□□□□□ -2
SCARNA17.3-201ENST00000516381 PAK3O75914 559 aaPredicted RBP2.55□□□□□ -2
SCARNA17.3-201ENST00000516381 ATN1P54259 1190 aaPredicted RBP2.55□□□□□ -2
SCARNA17.3-201ENST00000516381 ATXN8OSP0DMR3 200 aa2.52□□□□□ -2.01
SCARNA17.3-201ENST00000516381 COLQQ9Y215 455 aaPredicted RBP2.52□□□□□ -2.01
SCARNA17.3-201ENST00000516381 SLAIN1Q8ND83 568 aa2.51□□□□□ -2.01
SCARNA17.3-201ENST00000516381 MARVELD3Q96A59 401 aa2.5□□□□□ -2.01
SCARNA17.3-201ENST00000516381 BMP2KQ9NSY1 1161 aaPredicted RBP2.49□□□□□ -2.01
SCARNA17.3-201ENST00000516381 TRPC6Q9Y210 931 aa2.49□□□□□ -2.01
SCARNA17.3-201ENST00000516381 ZBTB22O15209 634 aa2.48□□□□□ -2.01
SCARNA17.3-201ENST00000516381 SEC24BO95487 1268 aa2.48□□□□□ -2.01
SCARNA17.3-201ENST00000516381 MNX1P50219 401 aaPredicted RBP2.48□□□□□ -2.01
SCARNA17.3-201ENST00000516381 TMEM121BQ9BXQ6 578 aaPredicted RBP2.48□□□□□ -2.01
SCARNA17.3-201ENST00000516381 KRTAP3-3Q9BYR6 98 aa2.48□□□□□ -2.01
SCARNA17.3-201ENST00000516381 KRTAP3-2Q9BYR7 98 aa2.48□□□□□ -2.01
SCARNA17.3-201ENST00000516381 NPM1P06748 294 aaKnown RBP eCLIP2.47□□□□□ -2.01
SCARNA17.3-201ENST00000516381 SLC4A1APQ9BWU0 796 aaKnown RBP2.47□□□□□ -2.01
SCARNA17.3-201ENST00000516381 POTEB3A0JP26 581 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 TTLL13PA6NNM8 815 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 TIE1P35590 1138 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 POTEBQ6S5H4 581 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 KIF12Q96FN5 646 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 TSPYL2Q9H2G4 693 aaPredicted RBP2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 STAG3Q9UJ98 1225 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 CCDC61Q9Y6R9 512 aa2.45□□□□□ -2.02
SCARNA17.3-201ENST00000516381 EMP3P54852 163 aa2.44□□□□□ -2.02
SCARNA17.3-201ENST00000516381 SNPHO15079 494 aa2.43□□□□□ -2.02
SCARNA17.3-201ENST00000516381 MAP3K13O43283 966 aa2.43□□□□□ -2.02
SCARNA17.3-201ENST00000516381 IER5LQ5T953 404 aa2.43□□□□□ -2.02
SCARNA17.3-201ENST00000516381 HS3ST6Q96QI5 342 aa2.43□□□□□ -2.02
SCARNA17.3-201ENST00000516381 TRIM35Q9UPQ4 493 aa2.43□□□□□ -2.02
SCARNA17.3-201ENST00000516381 FAM205CA6NFA0 338 aa2.42□□□□□ -2.02
SCARNA17.3-201ENST00000516381 RNF166Q96A37 237 aaPredicted RBP2.42□□□□□ -2.02
SCARNA17.3-201ENST00000516381 PLCG2P16885 1265 aa2.39□□□□□ -2.03
SCARNA17.3-201ENST00000516381 IRX5P78411 483 aaPredicted RBP2.39□□□□□ -2.03
SCARNA17.3-201ENST00000516381 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.39□□□□□ -2.03
SCARNA17.3-201ENST00000516381 MYT1LQ9UL68 1186 aa2.38□□□□□ -2.03
SCARNA17.3-201ENST00000516381 OCEL1Q9H607 264 aa2.36□□□□□ -2.03
SCARNA17.3-201ENST00000516381 PCDHB13Q9Y5F0 798 aa2.36□□□□□ -2.03
SCARNA17.3-201ENST00000516381 RASEFQ8IZ41 740 aa2.35□□□□□ -2.03
SCARNA17.3-201ENST00000516381 TMEM106CQ9BVX2 250 aa2.35□□□□□ -2.03
SCARNA17.3-201ENST00000516381 IFNL1Q8IU54 200 aa2.34□□□□□ -2.03
SCARNA17.3-201ENST00000516381 SGIP1Q9BQI5 828 aa2.34□□□□□ -2.03
SCARNA17.3-201ENST00000516381 SPDYE4A6NLX3 237 aa2.33□□□□□ -2.04
SCARNA17.3-201ENST00000516381 C3orf67Q6ZVT6 689 aa2.33□□□□□ -2.04
SCARNA17.3-201ENST00000516381 HOXB3P14651 431 aaPredicted RBP2.32□□□□□ -2.04
SCARNA17.3-201ENST00000516381 PLA2G2EQ9NZK7 142 aa2.32□□□□□ -2.04
SCARNA17.3-201ENST00000516381 ERBB3P21860 1342 aa2.32□□□□□ -2.04
SCARNA17.3-201ENST00000516381 HOXB1P14653 301 aaPredicted RBP2.31□□□□□ -2.04
SCARNA17.3-201ENST00000516381 PDCD7Q8N8D1 485 aaKnown RBP2.31□□□□□ -2.04
SCARNA17.3-201ENST00000516381 PTGER2P43116 358 aa2.3□□□□□ -2.04
SCARNA17.3-201ENST00000516381 VARS2Q5ST30 1063 aaKnown RBP2.3□□□□□ -2.04
SCARNA17.3-201ENST00000516381 ZNF687Q8N1G0 1237 aa2.29□□□□□ -2.04
SCARNA17.3-201ENST00000516381 L3MBTL3Q96JM7 780 aaPredicted RBP2.29□□□□□ -2.04
SCARNA17.3-201ENST00000516381 ANKRD13DQ6ZTN6 518 aa2.28□□□□□ -2.04
SCARNA17.3-201ENST00000516381 ZNF710Q8N1W2 664 aa2.28□□□□□ -2.04
SCARNA17.3-201ENST00000516381 IRX2Q9BZI1 471 aaPredicted RBP2.27□□□□□ -2.05
SCARNA17.3-201ENST00000516381 DOK7Q18PE1 504 aa2.26□□□□□ -2.05
SCARNA17.3-201ENST00000516381 HCSTQ9UBK5 93 aa2.26□□□□□ -2.05
SCARNA17.3-201ENST00000516381 PLEKHG5O94827 1062 aa2.25□□□□□ -2.05
SCARNA17.3-201ENST00000516381 NUBP1P53384 320 aa2.25□□□□□ -2.05
SCARNA17.3-201ENST00000516381 MIER1Q8N108 512 aa2.25□□□□□ -2.05
SCARNA17.3-201ENST00000516381 RIMBP2O15034 1052 aa2.24□□□□□ -2.05
SCARNA17.3-201ENST00000516381 LSM11P83369 360 aaKnown RBP eCLIP2.24□□□□□ -2.05
SCARNA17.3-201ENST00000516381 DPY19L2Q6NUT2 758 aa2.24□□□□□ -2.05
SCARNA17.3-201ENST00000516381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.24□□□□□ -2.05
SCARNA17.3-201ENST00000516381 PCDHB8Q9UN66 801 aa2.24□□□□□ -2.05
SCARNA17.3-201ENST00000516381 MKRN3Q13064 507 aaKnown RBP2.23□□□□□ -2.05
SCARNA17.3-201ENST00000516381 GPR153Q6NV75 609 aa2.23□□□□□ -2.05
SCARNA17.3-201ENST00000516381 PROM2Q8N271 834 aa2.23□□□□□ -2.05
SCARNA17.3-201ENST00000516381 RGS20O76081 388 aa2.22□□□□□ -2.05
SCARNA17.3-201ENST00000516381 PYGBP11216 843 aa2.22□□□□□ -2.05
SCARNA17.3-201ENST00000516381 GOLGA2Q08379 1002 aa2.22□□□□□ -2.05
SCARNA17.3-201ENST00000516381 ILDR1Q86SU0 546 aaPredicted RBP2.22□□□□□ -2.05
SCARNA17.3-201ENST00000516381 FAM212AQ96EL1 285 aa2.22□□□□□ -2.05
SCARNA17.3-201ENST00000516381 Q6ZNB5 142 aa2.21□□□□□ -2.06
SCARNA17.3-201ENST00000516381 ZSWIM6Q9HCJ5 1215 aa2.21□□□□□ -2.06
SCARNA17.3-201ENST00000516381 BOLA1Q9Y3E2 137 aa2.21□□□□□ -2.06
SCARNA17.3-201ENST00000516381 G3V3G9 751 aa2.2□□□□□ -2.06
SCARNA17.3-201ENST00000516381 DCAF8Q5TAQ9 597 aa2.2□□□□□ -2.06
SCARNA17.3-201ENST00000516381 POTEEQ6S8J3 1075 aa2.2□□□□□ -2.06
SCARNA17.3-201ENST00000516381 ZNF316A6NFI3 1004 aaPredicted RBP2.19□□□□□ -2.06
SCARNA17.3-201ENST00000516381 ARSIQ5FYB1 569 aa2.19□□□□□ -2.06
SCARNA17.3-201ENST00000516381 PLCD3Q8N3E9 789 aa2.19□□□□□ -2.06
SCARNA17.3-201ENST00000516381 KHSRPQ92945 711 aaKnown RBP eCLIP2.19□□□□□ -2.06
SCARNA17.3-201ENST00000516381 AXIN2Q9Y2T1 843 aa2.19□□□□□ -2.06
SCARNA17.3-201ENST00000516381 LCE2BO14633 110 aa2.18□□□□□ -2.06
SCARNA17.3-201ENST00000516381 TMEM92Q6UXU6 159 aa2.18□□□□□ -2.06
SCARNA17.3-201ENST00000516381 A0A0G2JS52 829 aa2.17□□□□□ -2.06
SCARNA17.3-201ENST00000516381 PBX2P40425 430 aa2.17□□□□□ -2.06
SCARNA17.3-201ENST00000516381 ADGRD1Q6QNK2 874 aa2.17□□□□□ -2.06
SCARNA17.3-201ENST00000516381 KCTD12Q96CX2 325 aaKnown RBP2.17□□□□□ -2.06
SCARNA17.3-201ENST00000516381 ZBTB47Q9UFB7 747 aaPredicted RBP2.17□□□□□ -2.06
SCARNA17.3-201ENST00000516381 PSEN1P49768 467 aa2.16□□□□□ -2.06
SCARNA17.3-201ENST00000516381 IFFO2Q5TF58 517 aa2.16□□□□□ -2.06
SCARNA17.3-201ENST00000516381 ZNF467Q7Z7K2 595 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms