RNA–Protein interactions for RNA: ENST00000516275.1

RN7SKP12-201, Transcript of RNA, 7SK small nuclear pseudogene 12, humanhuman

BASIC

Gene RN7SKP12, Length 143 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP12-201ENST00000516275 PAK3O75914 559 aaPredicted RBP6.94□□□□□ -1.3
RN7SKP12-201ENST00000516275 POTEFA5A3E0 1075 aa6.9□□□□□ -1.3
RN7SKP12-201ENST00000516275 MKRN4PQ13434 485 aaPredicted RBP6.9□□□□□ -1.3
RN7SKP12-201ENST00000516275 MS4A3Q96HJ5 214 aa6.9□□□□□ -1.3
RN7SKP12-201ENST00000516275 ATN1P54259 1190 aaPredicted RBP6.86□□□□□ -1.31
RN7SKP12-201ENST00000516275 TMEM121BQ9BXQ6 578 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP12-201ENST00000516275 CREBZFQ9NS37 354 aa6.83□□□□□ -1.32
RN7SKP12-201ENST00000516275 FOXD4L1Q9NU39 408 aa6.82□□□□□ -1.32
RN7SKP12-201ENST00000516275 SLAIN1Q8ND83 568 aa6.81□□□□□ -1.32
RN7SKP12-201ENST00000516275 MARVELD3Q96A59 401 aa6.77□□□□□ -1.33
RN7SKP12-201ENST00000516275 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
RN7SKP12-201ENST00000516275 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
RN7SKP12-201ENST00000516275 COLQQ9Y215 455 aaPredicted RBP6.75□□□□□ -1.33
RN7SKP12-201ENST00000516275 SEC24BO95487 1268 aa6.73□□□□□ -1.33
RN7SKP12-201ENST00000516275 BMP2KQ9NSY1 1161 aaPredicted RBP6.72□□□□□ -1.33
RN7SKP12-201ENST00000516275 NPM1P06748 294 aaKnown RBP eCLIP6.68□□□□□ -1.34
RN7SKP12-201ENST00000516275 ATXN8OSP0DMR3 200 aa6.68□□□□□ -1.34
RN7SKP12-201ENST00000516275 RNF166Q96A37 237 aaPredicted RBP6.67□□□□□ -1.34
RN7SKP12-201ENST00000516275 SNPHO15079 494 aa6.66□□□□□ -1.34
RN7SKP12-201ENST00000516275 EMP3P54852 163 aa6.66□□□□□ -1.34
RN7SKP12-201ENST00000516275 HS3ST6Q96QI5 342 aa6.64□□□□□ -1.35
RN7SKP12-201ENST00000516275 TIE1P35590 1138 aa6.63□□□□□ -1.35
RN7SKP12-201ENST00000516275 TRPC6Q9Y210 931 aa6.63□□□□□ -1.35
RN7SKP12-201ENST00000516275 POTEB3A0JP26 581 aa6.62□□□□□ -1.35
RN7SKP12-201ENST00000516275 POTEBQ6S5H4 581 aa6.62□□□□□ -1.35
RN7SKP12-201ENST00000516275 IER5LQ5T953 404 aa6.61□□□□□ -1.35
RN7SKP12-201ENST00000516275 FAM205CA6NFA0 338 aa6.58□□□□□ -1.36
RN7SKP12-201ENST00000516275 MNX1P50219 401 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP12-201ENST00000516275 STAG3Q9UJ98 1225 aa6.58□□□□□ -1.36
RN7SKP12-201ENST00000516275 TTLL13PA6NNM8 815 aa6.57□□□□□ -1.36
RN7SKP12-201ENST00000516275 KIF12Q96FN5 646 aa6.56□□□□□ -1.36
RN7SKP12-201ENST00000516275 CCDC61Q9Y6R9 512 aa6.55□□□□□ -1.36
RN7SKP12-201ENST00000516275 TRIM35Q9UPQ4 493 aa6.54□□□□□ -1.36
RN7SKP12-201ENST00000516275 TSPYL2Q9H2G4 693 aaPredicted RBP6.52□□□□□ -1.37
RN7SKP12-201ENST00000516275 MYT1LQ9UL68 1186 aa6.52□□□□□ -1.37
RN7SKP12-201ENST00000516275 PLCG2P16885 1265 aa6.5□□□□□ -1.37
RN7SKP12-201ENST00000516275 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.48□□□□□ -1.37
RN7SKP12-201ENST00000516275 MAP3K13O43283 966 aa6.47□□□□□ -1.37
RN7SKP12-201ENST00000516275 IRX5P78411 483 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP12-201ENST00000516275 SLC4A1APQ9BWU0 796 aaKnown RBP6.4□□□□□ -1.38
RN7SKP12-201ENST00000516275 ZBTB22O15209 634 aa6.39□□□□□ -1.39
RN7SKP12-201ENST00000516275 PLA2G2EQ9NZK7 142 aa6.38□□□□□ -1.39
RN7SKP12-201ENST00000516275 PTGER2P43116 358 aa6.36□□□□□ -1.39
RN7SKP12-201ENST00000516275 OCEL1Q9H607 264 aa6.34□□□□□ -1.39
RN7SKP12-201ENST00000516275 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
RN7SKP12-201ENST00000516275 SGIP1Q9BQI5 828 aa6.3□□□□□ -1.4
RN7SKP12-201ENST00000516275 TMEM106CQ9BVX2 250 aa6.3□□□□□ -1.4
RN7SKP12-201ENST00000516275 ERBB3P21860 1342 aa6.29□□□□□ -1.4
RN7SKP12-201ENST00000516275 PCDHB13Q9Y5F0 798 aa6.29□□□□□ -1.4
RN7SKP12-201ENST00000516275 IRX2Q9BZI1 471 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP12-201ENST00000516275 HOXB1P14653 301 aaPredicted RBP6.25□□□□□ -1.41
RN7SKP12-201ENST00000516275 VARS2Q5ST30 1063 aaKnown RBP6.24□□□□□ -1.41
RN7SKP12-201ENST00000516275 IFNL1Q8IU54 200 aa6.22□□□□□ -1.41
RN7SKP12-201ENST00000516275 HOXB3P14651 431 aaPredicted RBP6.21□□□□□ -1.42
RN7SKP12-201ENST00000516275 RASEFQ8IZ41 740 aa6.21□□□□□ -1.42
RN7SKP12-201ENST00000516275 ZNF687Q8N1G0 1237 aa6.2□□□□□ -1.42
RN7SKP12-201ENST00000516275 ZNF710Q8N1W2 664 aa6.19□□□□□ -1.42
RN7SKP12-201ENST00000516275 L3MBTL3Q96JM7 780 aaPredicted RBP6.17□□□□□ -1.42
RN7SKP12-201ENST00000516275 HCSTQ9UBK5 93 aa6.17□□□□□ -1.42
RN7SKP12-201ENST00000516275 ANKRD13DQ6ZTN6 518 aa6.16□□□□□ -1.42
RN7SKP12-201ENST00000516275 PDCD7Q8N8D1 485 aaKnown RBP6.16□□□□□ -1.42
RN7SKP12-201ENST00000516275 RGS20O76081 388 aa6.15□□□□□ -1.42
RN7SKP12-201ENST00000516275 DOK7Q18PE1 504 aa6.12□□□□□ -1.43
RN7SKP12-201ENST00000516275 SPDYE4A6NLX3 237 aa6.1□□□□□ -1.43
RN7SKP12-201ENST00000516275 LSM11P83369 360 aaKnown RBP eCLIP6.08□□□□□ -1.44
RN7SKP12-201ENST00000516275 Q6ZNB5 142 aa6.08□□□□□ -1.44
RN7SKP12-201ENST00000516275 RIMBP2O15034 1052 aa6.07□□□□□ -1.44
RN7SKP12-201ENST00000516275 PLEKHG5O94827 1062 aa6.01□□□□□ -1.45
RN7SKP12-201ENST00000516275 ZSWIM6Q9HCJ5 1215 aa5.99□□□□□ -1.45
RN7SKP12-201ENST00000516275 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
RN7SKP12-201ENST00000516275 MKRN3Q13064 507 aaKnown RBP5.98□□□□□ -1.45
RN7SKP12-201ENST00000516275 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
RN7SKP12-201ENST00000516275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.98□□□□□ -1.45
RN7SKP12-201ENST00000516275 A0A0G2JS52 829 aa5.95□□□□□ -1.46
RN7SKP12-201ENST00000516275 GOLGA2Q08379 1002 aa5.95□□□□□ -1.46
RN7SKP12-201ENST00000516275 GPR153Q6NV75 609 aa5.95□□□□□ -1.46
RN7SKP12-201ENST00000516275 G3V3G9 751 aa5.94□□□□□ -1.46
RN7SKP12-201ENST00000516275 DCAF8Q5TAQ9 597 aa5.94□□□□□ -1.46
RN7SKP12-201ENST00000516275 IFFO2Q5TF58 517 aa5.94□□□□□ -1.46
RN7SKP12-201ENST00000516275 BOLA1Q9Y3E2 137 aa5.93□□□□□ -1.46
RN7SKP12-201ENST00000516275 PBX2P40425 430 aa5.92□□□□□ -1.46
RN7SKP12-201ENST00000516275 NUBP1P53384 320 aa5.92□□□□□ -1.46
RN7SKP12-201ENST00000516275 FAM212AQ96EL1 285 aa5.92□□□□□ -1.46
RN7SKP12-201ENST00000516275 LCE2BO14633 110 aa5.91□□□□□ -1.46
RN7SKP12-201ENST00000516275 DPY19L2Q6NUT2 758 aa5.91□□□□□ -1.46
RN7SKP12-201ENST00000516275 MIER1Q8N108 512 aa5.91□□□□□ -1.46
RN7SKP12-201ENST00000516275 PCDHB8Q9UN66 801 aa5.91□□□□□ -1.46
RN7SKP12-201ENST00000516275 ZNF316A6NFI3 1004 aaPredicted RBP5.9□□□□□ -1.46
RN7SKP12-201ENST00000516275 ILDR1Q86SU0 546 aaPredicted RBP5.9□□□□□ -1.46
RN7SKP12-201ENST00000516275 TRAF7Q6Q0C0 670 aa5.87□□□□□ -1.47
RN7SKP12-201ENST00000516275 POTEEQ6S8J3 1075 aa5.87□□□□□ -1.47
RN7SKP12-201ENST00000516275 ADGRD1Q6QNK2 874 aa5.86□□□□□ -1.47
RN7SKP12-201ENST00000516275 KCTD12Q96CX2 325 aaKnown RBP5.85□□□□□ -1.47
RN7SKP12-201ENST00000516275 AXIN2Q9Y2T1 843 aa5.85□□□□□ -1.47
RN7SKP12-201ENST00000516275 PYGBP11216 843 aa5.84□□□□□ -1.47
RN7SKP12-201ENST00000516275 ARSIQ5FYB1 569 aa5.84□□□□□ -1.47
RN7SKP12-201ENST00000516275 LAPTM4AQ15012 233 aa5.83□□□□□ -1.48
RN7SKP12-201ENST00000516275 ZNF775Q96BV0 537 aaPredicted RBP5.82□□□□□ -1.48
RN7SKP12-201ENST00000516275 PROM2Q8N271 834 aa5.81□□□□□ -1.48
RN7SKP12-201ENST00000516275 ZBTB47Q9UFB7 747 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms