RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 GTPBP6O43824 516 aaPredicted RBP8.93□□□□□ -0.98
RNU6-488P-201ENST00000515918 GSE1Q14687 1217 aa8.93□□□□□ -0.98
RNU6-488P-201ENST00000515918 RIOK3O14730 519 aaKnown RBP8.9□□□□□ -0.98
RNU6-488P-201ENST00000515918 DCAF8Q5TAQ9 597 aa8.87□□□□□ -0.99
RNU6-488P-201ENST00000515918 STK25O00506 426 aa8.83□□□□□ -1
RNU6-488P-201ENST00000515918 TIMELESSQ9UNS1 1208 aa8.83□□□□□ -1
RNU6-488P-201ENST00000515918 MNX1P50219 401 aaPredicted RBP8.82□□□□□ -1
RNU6-488P-201ENST00000515918 VGFO15240 615 aaPredicted RBP8.81□□□□□ -1
RNU6-488P-201ENST00000515918 CHRM1P11229 460 aaPredicted RBP8.8□□□□□ -1
RNU6-488P-201ENST00000515918 POTEDQ86YR6 584 aa8.79□□□□□ -1
RNU6-488P-201ENST00000515918 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
RNU6-488P-201ENST00000515918 CREBZFQ9NS37 354 aa8.79□□□□□ -1
RNU6-488P-201ENST00000515918 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
RNU6-488P-201ENST00000515918 FAM212AQ96EL1 285 aa8.77□□□□□ -1.01
RNU6-488P-201ENST00000515918 GTF3C3Q9Y5Q9 886 aa8.77□□□□□ -1.01
RNU6-488P-201ENST00000515918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.76□□□□□ -1.01
RNU6-488P-201ENST00000515918 RASEFQ8IZ41 740 aa8.76□□□□□ -1.01
RNU6-488P-201ENST00000515918 ZFP91Q96JP5 570 aaPredicted RBP8.76□□□□□ -1.01
RNU6-488P-201ENST00000515918 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
RNU6-488P-201ENST00000515918 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
RNU6-488P-201ENST00000515918 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
RNU6-488P-201ENST00000515918 PRR29P0C7W0 189 aa8.69□□□□□ -1.02
RNU6-488P-201ENST00000515918 PYGBP11216 843 aa8.69□□□□□ -1.02
RNU6-488P-201ENST00000515918 RYDENQ9NUL5 291 aaKnown RBP8.69□□□□□ -1.02
RNU6-488P-201ENST00000515918 CLEC11AQ9Y240 323 aa8.68□□□□□ -1.02
RNU6-488P-201ENST00000515918 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
RNU6-488P-201ENST00000515918 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
RNU6-488P-201ENST00000515918 AKT1S1Q96B36 256 aa8.67□□□□□ -1.02
RNU6-488P-201ENST00000515918 P3H3Q8IVL6 736 aa8.64□□□□□ -1.03
RNU6-488P-201ENST00000515918 KCNV2Q8TDN2 545 aa8.64□□□□□ -1.03
RNU6-488P-201ENST00000515918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
RNU6-488P-201ENST00000515918 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
RNU6-488P-201ENST00000515918 CACNB1Q02641 598 aaPredicted RBP8.62□□□□□ -1.03
RNU6-488P-201ENST00000515918 LMOD2Q6P5Q4 547 aa8.6□□□□□ -1.03
RNU6-488P-201ENST00000515918 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
RNU6-488P-201ENST00000515918 ERICH6Q7L0X2 663 aa8.57□□□□□ -1.04
RNU6-488P-201ENST00000515918 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
RNU6-488P-201ENST00000515918 MFRPQ9BY79 579 aa8.53□□□□□ -1.04
RNU6-488P-201ENST00000515918 PITPNM1O00562 1244 aa8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 ZNF467Q7Z7K2 595 aaPredicted RBP8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 ARXQ96QS3 562 aa8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 PCDHB13Q9Y5F0 798 aa8.52□□□□□ -1.05
RNU6-488P-201ENST00000515918 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
RNU6-488P-201ENST00000515918 PPP1R37O75864 691 aa8.49□□□□□ -1.05
RNU6-488P-201ENST00000515918 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
RNU6-488P-201ENST00000515918 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
RNU6-488P-201ENST00000515918 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
RNU6-488P-201ENST00000515918 PSEN1P49768 467 aa8.47□□□□□ -1.05
RNU6-488P-201ENST00000515918 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
RNU6-488P-201ENST00000515918 TESPA1A2RU30 521 aaPredicted RBP8.44□□□□□ -1.06
RNU6-488P-201ENST00000515918 SEMA3EO15041 775 aa8.44□□□□□ -1.06
RNU6-488P-201ENST00000515918 E2F4Q16254 413 aa8.44□□□□□ -1.06
RNU6-488P-201ENST00000515918 FBXO22Q8NEZ5 403 aa8.44□□□□□ -1.06
RNU6-488P-201ENST00000515918 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
RNU6-488P-201ENST00000515918 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
RNU6-488P-201ENST00000515918 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
RNU6-488P-201ENST00000515918 FARP1Q9Y4F1 1045 aaPredicted RBP8.42□□□□□ -1.06
RNU6-488P-201ENST00000515918 EFCAB3Q8N7B9 438 aa8.41□□□□□ -1.06
RNU6-488P-201ENST00000515918 NEUROD2Q15784 382 aa8.39□□□□□ -1.07
RNU6-488P-201ENST00000515918 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
RNU6-488P-201ENST00000515918 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
RNU6-488P-201ENST00000515918 IFNL1Q8IU54 200 aa8.38□□□□□ -1.07
RNU6-488P-201ENST00000515918 NLRP6P59044 892 aa8.37□□□□□ -1.07
RNU6-488P-201ENST00000515918 SOX12O15370 315 aa8.36□□□□□ -1.07
RNU6-488P-201ENST00000515918 ZMYND10O75800 440 aa8.36□□□□□ -1.07
RNU6-488P-201ENST00000515918 CABP2Q9NPB3 220 aa8.35□□□□□ -1.07
RNU6-488P-201ENST00000515918 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
RNU6-488P-201ENST00000515918 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
RNU6-488P-201ENST00000515918 LARP6Q9BRS8 491 aaKnown RBP8.33□□□□□ -1.08
RNU6-488P-201ENST00000515918 MAP3K13O43283 966 aa8.32□□□□□ -1.08
RNU6-488P-201ENST00000515918 MFSD10Q14728 455 aa8.32□□□□□ -1.08
RNU6-488P-201ENST00000515918 KIF12Q96FN5 646 aa8.31□□□□□ -1.08
RNU6-488P-201ENST00000515918 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
RNU6-488P-201ENST00000515918 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
RNU6-488P-201ENST00000515918 SUPT5HO00267 1087 aaKnown RBP8.3□□□□□ -1.08
RNU6-488P-201ENST00000515918 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
RNU6-488P-201ENST00000515918 CRISPLD2Q9H0B8 497 aa8.3□□□□□ -1.08
RNU6-488P-201ENST00000515918 PRKAR2AP13861 404 aaKnown RBP8.29□□□□□ -1.08
RNU6-488P-201ENST00000515918 PDE4AP27815 886 aa8.29□□□□□ -1.08
RNU6-488P-201ENST00000515918 SMYD5Q6GMV2 418 aa8.28□□□□□ -1.08
RNU6-488P-201ENST00000515918 CAMK2BQ13554 666 aa8.27□□□□□ -1.09
RNU6-488P-201ENST00000515918 DDX27Q96GQ7 796 aaKnown RBP8.25□□□□□ -1.09
RNU6-488P-201ENST00000515918 MLLT3P42568 568 aaPredicted RBP8.23□□□□□ -1.09
RNU6-488P-201ENST00000515918 FXR2P51116 673 aaKnown RBP eCLIP8.23□□□□□ -1.09
RNU6-488P-201ENST00000515918 RBM26Q5T8P6 1007 aaKnown RBP8.23□□□□□ -1.09
RNU6-488P-201ENST00000515918 GPBP1L1Q9HC44 474 aaPredicted RBP8.23□□□□□ -1.09
RNU6-488P-201ENST00000515918 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
RNU6-488P-201ENST00000515918 AK7Q96M32 723 aa8.22□□□□□ -1.09
RNU6-488P-201ENST00000515918 GPIHBP1Q8IV16 184 aa8.18□□□□□ -1.1
RNU6-488P-201ENST00000515918 IL27Q8NEV9 243 aa8.17□□□□□ -1.1
RNU6-488P-201ENST00000515918 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
RNU6-488P-201ENST00000515918 PHF12Q96QT6 1004 aa8.16□□□□□ -1.1
RNU6-488P-201ENST00000515918 KDM4CQ9H3R0 1056 aa8.16□□□□□ -1.1
RNU6-488P-201ENST00000515918 TRIM66O15016 1216 aa8.15□□□□□ -1.1
RNU6-488P-201ENST00000515918 TRPC6Q9Y210 931 aa8.15□□□□□ -1.1
RNU6-488P-201ENST00000515918 TMEM106CQ9BVX2 250 aa8.14□□□□□ -1.11
RNU6-488P-201ENST00000515918 PDE4DQ08499 809 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms