RNA–Protein interactions for RNA: ENST00000515706.1

AC016550.3-201, humanhuman

BASIC

Gene AC016550.3, Length 767 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.3-201ENST00000515706 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
AC016550.3-201ENST00000515706 MS4A3Q96HJ5 214 aa17.03■□□□□ 0.32
AC016550.3-201ENST00000515706 RASEFQ8IZ41 740 aa16.99■□□□□ 0.31
AC016550.3-201ENST00000515706 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
AC016550.3-201ENST00000515706 ASTLQ6HA08 431 aaPredicted RBP16.97■□□□□ 0.31
AC016550.3-201ENST00000515706 ATMINO43313 823 aaPredicted RBP16.9■□□□□ 0.3
AC016550.3-201ENST00000515706 NUBP1P53384 320 aa16.89■□□□□ 0.29
AC016550.3-201ENST00000515706 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
AC016550.3-201ENST00000515706 SLC39A7Q92504 469 aa16.88■□□□□ 0.29
AC016550.3-201ENST00000515706 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
AC016550.3-201ENST00000515706 MAP3K13O43283 966 aa16.86■□□□□ 0.29
AC016550.3-201ENST00000515706 C7P10643 843 aa16.86■□□□□ 0.29
AC016550.3-201ENST00000515706 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
AC016550.3-201ENST00000515706 TIE1P35590 1138 aa16.82■□□□□ 0.28
AC016550.3-201ENST00000515706 METRNQ9UJH8 293 aa16.8■□□□□ 0.28
AC016550.3-201ENST00000515706 ATN1P54259 1190 aaPredicted RBP16.76■□□□□ 0.27
AC016550.3-201ENST00000515706 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
AC016550.3-201ENST00000515706 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
AC016550.3-201ENST00000515706 VASPP50552 380 aaPredicted RBP16.73■□□□□ 0.27
AC016550.3-201ENST00000515706 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
AC016550.3-201ENST00000515706 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
AC016550.3-201ENST00000515706 KLHL34Q8N239 644 aa16.69■□□□□ 0.26
AC016550.3-201ENST00000515706 OTUD5Q96G74 571 aa16.68■□□□□ 0.26
AC016550.3-201ENST00000515706 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
AC016550.3-201ENST00000515706 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
AC016550.3-201ENST00000515706 TTLL13PA6NNM8 815 aa16.65■□□□□ 0.26
AC016550.3-201ENST00000515706 GSE1Q14687 1217 aa16.61■□□□□ 0.25
AC016550.3-201ENST00000515706 IFNL1Q8IU54 200 aa16.61■□□□□ 0.25
AC016550.3-201ENST00000515706 IER5LQ5T953 404 aa16.59■□□□□ 0.25
AC016550.3-201ENST00000515706 SEC24BO95487 1268 aa16.55■□□□□ 0.24
AC016550.3-201ENST00000515706 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
AC016550.3-201ENST00000515706 PYGBP11216 843 aa16.54■□□□□ 0.24
AC016550.3-201ENST00000515706 SCUBE2Q9NQ36 999 aa16.54■□□□□ 0.24
AC016550.3-201ENST00000515706 TMEM106CQ9BVX2 250 aa16.51■□□□□ 0.23
AC016550.3-201ENST00000515706 POTEJP0CG39 1038 aa16.47■□□□□ 0.23
AC016550.3-201ENST00000515706 POTEFA5A3E0 1075 aa16.46■□□□□ 0.23
AC016550.3-201ENST00000515706 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
AC016550.3-201ENST00000515706 CHRM1P11229 460 aaPredicted RBP16.43■□□□□ 0.22
AC016550.3-201ENST00000515706 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
AC016550.3-201ENST00000515706 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
AC016550.3-201ENST00000515706 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
AC016550.3-201ENST00000515706 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
AC016550.3-201ENST00000515706 PLCG2P16885 1265 aa16.36■□□□□ 0.21
AC016550.3-201ENST00000515706 IRX5P78411 483 aaPredicted RBP16.3■□□□□ 0.2
AC016550.3-201ENST00000515706 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
AC016550.3-201ENST00000515706 OCEL1Q9H607 264 aa16.28■□□□□ 0.2
AC016550.3-201ENST00000515706 GOLGA2Q08379 1002 aa16.27■□□□□ 0.2
AC016550.3-201ENST00000515706 POTEMA6NI47 508 aa16.22■□□□□ 0.19
AC016550.3-201ENST00000515706 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
AC016550.3-201ENST00000515706 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
AC016550.3-201ENST00000515706 PSEN1P49768 467 aa16.2■□□□□ 0.18
AC016550.3-201ENST00000515706 PDAP1Q13442 181 aaKnown RBP16.19■□□□□ 0.18
AC016550.3-201ENST00000515706 POTEGQ6S5H5 508 aa16.18■□□□□ 0.18
AC016550.3-201ENST00000515706 FAM163AQ96GL9 167 aaPredicted RBP16.15■□□□□ 0.18
AC016550.3-201ENST00000515706 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
AC016550.3-201ENST00000515706 PCDH10Q9P2E7 1040 aa16.14■□□□□ 0.17
AC016550.3-201ENST00000515706 L3MBTL3Q96JM7 780 aaPredicted RBP16.08■□□□□ 0.16
AC016550.3-201ENST00000515706 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.08■□□□□ 0.16
AC016550.3-201ENST00000515706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.05■□□□□ 0.16
AC016550.3-201ENST00000515706 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
AC016550.3-201ENST00000515706 LCE2DQ5TA82 110 aaPredicted RBP16.03■□□□□ 0.16
AC016550.3-201ENST00000515706 SNPHO15079 494 aa16■□□□□ 0.15
AC016550.3-201ENST00000515706 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
AC016550.3-201ENST00000515706 CABP2Q9NPB3 220 aa15.99■□□□□ 0.15
AC016550.3-201ENST00000515706 PLSCR2Q9NRY7 297 aa15.99■□□□□ 0.15
AC016550.3-201ENST00000515706 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
AC016550.3-201ENST00000515706 G3V3G9 751 aa15.92■□□□□ 0.14
AC016550.3-201ENST00000515706 RIOK3O14730 519 aaKnown RBP15.88■□□□□ 0.13
AC016550.3-201ENST00000515706 ST18O60284 1047 aa15.88■□□□□ 0.13
AC016550.3-201ENST00000515706 TMEM121BQ9BXQ6 578 aaPredicted RBP15.88■□□□□ 0.13
AC016550.3-201ENST00000515706 TAOK2Q9UL54 1235 aa15.86■□□□□ 0.13
AC016550.3-201ENST00000515706 VGFO15240 615 aaPredicted RBP15.84■□□□□ 0.13
AC016550.3-201ENST00000515706 BOLA1Q9Y3E2 137 aa15.82■□□□□ 0.12
AC016550.3-201ENST00000515706 EFCAB3Q8N7B9 438 aa15.79■□□□□ 0.12
AC016550.3-201ENST00000515706 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
AC016550.3-201ENST00000515706 SOX12O15370 315 aa15.77■□□□□ 0.12
AC016550.3-201ENST00000515706 RNF25Q96BH1 459 aaPredicted RBP15.76■□□□□ 0.11
AC016550.3-201ENST00000515706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
AC016550.3-201ENST00000515706 CDAN1Q8IWY9 1227 aa15.74■□□□□ 0.11
AC016550.3-201ENST00000515706 ZFP91Q96JP5 570 aaPredicted RBP15.74■□□□□ 0.11
AC016550.3-201ENST00000515706 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
AC016550.3-201ENST00000515706 EMP3P54852 163 aa15.58■□□□□ 0.08
AC016550.3-201ENST00000515706 NLRP6P59044 892 aa15.58■□□□□ 0.08
AC016550.3-201ENST00000515706 MICALL2Q8IY33 904 aa15.58■□□□□ 0.08
AC016550.3-201ENST00000515706 MARVELD3Q96A59 401 aa15.58■□□□□ 0.08
AC016550.3-201ENST00000515706 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
AC016550.3-201ENST00000515706 DOK7Q18PE1 504 aa15.57■□□□□ 0.08
AC016550.3-201ENST00000515706 PHF8Q9UPP1 1060 aa15.56■□□□□ 0.08
AC016550.3-201ENST00000515706 STK24Q9Y6E0 443 aa15.55■□□□□ 0.08
AC016550.3-201ENST00000515706 ZNF710Q8N1W2 664 aa15.54■□□□□ 0.08
AC016550.3-201ENST00000515706 RIMBP2O15034 1052 aa15.53■□□□□ 0.08
AC016550.3-201ENST00000515706 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
AC016550.3-201ENST00000515706 STK25O00506 426 aa15.52■□□□□ 0.08
AC016550.3-201ENST00000515706 HOXB3P14651 431 aaPredicted RBP15.49■□□□□ 0.07
AC016550.3-201ENST00000515706 PKD2Q13563 968 aa15.49■□□□□ 0.07
AC016550.3-201ENST00000515706 HOXB1P14653 301 aaPredicted RBP15.45■□□□□ 0.06
AC016550.3-201ENST00000515706 FBXO22Q8NEZ5 403 aa15.44■□□□□ 0.06
AC016550.3-201ENST00000515706 ZSWIM6Q9HCJ5 1215 aa15.44■□□□□ 0.06
AC016550.3-201ENST00000515706 FAM205CA6NFA0 338 aa15.43■□□□□ 0.06
AC016550.3-201ENST00000515706 HS3ST6Q96QI5 342 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms