RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LHX8Q68G74 356 aa13.85□□□□□ -0.19
LINC01088-211ENST00000515597 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
LINC01088-211ENST00000515597 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
LINC01088-211ENST00000515597 NUBP1P53384 320 aa13.78□□□□□ -0.2
LINC01088-211ENST00000515597 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
LINC01088-211ENST00000515597 MAP3K13O43283 966 aa13.73□□□□□ -0.21
LINC01088-211ENST00000515597 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
LINC01088-211ENST00000515597 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
LINC01088-211ENST00000515597 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
LINC01088-211ENST00000515597 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
LINC01088-211ENST00000515597 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
LINC01088-211ENST00000515597 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
LINC01088-211ENST00000515597 ATN1P54259 1190 aaPredicted RBP13.62□□□□□ -0.23
LINC01088-211ENST00000515597 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
LINC01088-211ENST00000515597 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
LINC01088-211ENST00000515597 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
LINC01088-211ENST00000515597 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
LINC01088-211ENST00000515597 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
LINC01088-211ENST00000515597 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
LINC01088-211ENST00000515597 SLC39A7Q92504 469 aa13.56□□□□□ -0.24
LINC01088-211ENST00000515597 TIE1P35590 1138 aa13.55□□□□□ -0.24
LINC01088-211ENST00000515597 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
LINC01088-211ENST00000515597 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
LINC01088-211ENST00000515597 PYGBP11216 843 aa13.53□□□□□ -0.24
LINC01088-211ENST00000515597 C7P10643 843 aa13.52□□□□□ -0.25
LINC01088-211ENST00000515597 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
LINC01088-211ENST00000515597 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
LINC01088-211ENST00000515597 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
LINC01088-211ENST00000515597 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
LINC01088-211ENST00000515597 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
LINC01088-211ENST00000515597 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
LINC01088-211ENST00000515597 GSE1Q14687 1217 aa13.42□□□□□ -0.26
LINC01088-211ENST00000515597 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
LINC01088-211ENST00000515597 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
LINC01088-211ENST00000515597 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
LINC01088-211ENST00000515597 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
LINC01088-211ENST00000515597 SEC24BO95487 1268 aa13.35□□□□□ -0.27
LINC01088-211ENST00000515597 CIZ1Q9ULV3 898 aaPredicted RBP13.33□□□□□ -0.28
LINC01088-211ENST00000515597 IER5LQ5T953 404 aa13.32□□□□□ -0.28
LINC01088-211ENST00000515597 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-211ENST00000515597 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
LINC01088-211ENST00000515597 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-211ENST00000515597 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
LINC01088-211ENST00000515597 PLCG2P16885 1265 aa13.22□□□□□ -0.29
LINC01088-211ENST00000515597 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
LINC01088-211ENST00000515597 PSEN1P49768 467 aa13.19□□□□□ -0.3
LINC01088-211ENST00000515597 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
LINC01088-211ENST00000515597 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
LINC01088-211ENST00000515597 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
LINC01088-211ENST00000515597 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
LINC01088-211ENST00000515597 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
LINC01088-211ENST00000515597 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
LINC01088-211ENST00000515597 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
LINC01088-211ENST00000515597 LCE2DQ5TA82 110 aaPredicted RBP13.05□□□□□ -0.32
LINC01088-211ENST00000515597 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
LINC01088-211ENST00000515597 POTEMA6NI47 508 aa13.04□□□□□ -0.32
LINC01088-211ENST00000515597 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-211ENST00000515597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01088-211ENST00000515597 POTEGQ6S5H5 508 aa13.02□□□□□ -0.33
LINC01088-211ENST00000515597 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
LINC01088-211ENST00000515597 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
LINC01088-211ENST00000515597 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
LINC01088-211ENST00000515597 DPY19L2Q6NUT2 758 aa12.94□□□□□ -0.34
LINC01088-211ENST00000515597 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
LINC01088-211ENST00000515597 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
LINC01088-211ENST00000515597 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
LINC01088-211ENST00000515597 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
LINC01088-211ENST00000515597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
LINC01088-211ENST00000515597 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
LINC01088-211ENST00000515597 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
LINC01088-211ENST00000515597 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
LINC01088-211ENST00000515597 ST18O60284 1047 aa12.84□□□□□ -0.35
LINC01088-211ENST00000515597 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
LINC01088-211ENST00000515597 BOLA1Q9Y3E2 137 aa12.82□□□□□ -0.36
LINC01088-211ENST00000515597 G3V3G9 751 aa12.8□□□□□ -0.36
LINC01088-211ENST00000515597 PKD2Q13563 968 aa12.79□□□□□ -0.36
LINC01088-211ENST00000515597 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
LINC01088-211ENST00000515597 SNPHO15079 494 aa12.76□□□□□ -0.37
LINC01088-211ENST00000515597 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
LINC01088-211ENST00000515597 RGL2O15211 777 aa12.74□□□□□ -0.37
LINC01088-211ENST00000515597 SOX12O15370 315 aa12.74□□□□□ -0.37
LINC01088-211ENST00000515597 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
LINC01088-211ENST00000515597 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
LINC01088-211ENST00000515597 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
LINC01088-211ENST00000515597 STK25O00506 426 aa12.71□□□□□ -0.37
LINC01088-211ENST00000515597 TMEM121BQ9BXQ6 578 aaPredicted RBP12.71□□□□□ -0.37
LINC01088-211ENST00000515597 PCDH10Q9P2E7 1040 aa12.71□□□□□ -0.37
LINC01088-211ENST00000515597 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
LINC01088-211ENST00000515597 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
LINC01088-211ENST00000515597 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
LINC01088-211ENST00000515597 NLRP6P59044 892 aa12.63□□□□□ -0.39
LINC01088-211ENST00000515597 TMEM92Q6UXU6 159 aa12.63□□□□□ -0.39
LINC01088-211ENST00000515597 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
LINC01088-211ENST00000515597 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
LINC01088-211ENST00000515597 HOXB3P14651 431 aaPredicted RBP12.61□□□□□ -0.39
LINC01088-211ENST00000515597 EMP3P54852 163 aa12.59□□□□□ -0.39
LINC01088-211ENST00000515597 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
LINC01088-211ENST00000515597 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
LINC01088-211ENST00000515597 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
LINC01088-211ENST00000515597 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms