RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 NUBP1P53384 320 aa14.78□□□□□ -0.04
RUFY3-215ENST00000515479 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
RUFY3-215ENST00000515479 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
RUFY3-215ENST00000515479 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
RUFY3-215ENST00000515479 FAM212AQ96EL1 285 aa14.71□□□□□ -0.05
RUFY3-215ENST00000515479 MS4A3Q96HJ5 214 aa14.71□□□□□ -0.05
RUFY3-215ENST00000515479 KIF12Q96FN5 646 aa14.67□□□□□ -0.06
RUFY3-215ENST00000515479 MAP3K13O43283 966 aa14.62□□□□□ -0.07
RUFY3-215ENST00000515479 DCAF8Q5TAQ9 597 aa14.62□□□□□ -0.07
RUFY3-215ENST00000515479 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
RUFY3-215ENST00000515479 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
RUFY3-215ENST00000515479 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
RUFY3-215ENST00000515479 GSE1Q14687 1217 aa14.51□□□□□ -0.09
RUFY3-215ENST00000515479 PYGBP11216 843 aa14.5□□□□□ -0.09
RUFY3-215ENST00000515479 ASTLQ6HA08 431 aaPredicted RBP14.5□□□□□ -0.09
RUFY3-215ENST00000515479 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
RUFY3-215ENST00000515479 ATMINO43313 823 aaPredicted RBP14.49□□□□□ -0.09
RUFY3-215ENST00000515479 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
RUFY3-215ENST00000515479 LHX8Q68G74 356 aa14.47□□□□□ -0.09
RUFY3-215ENST00000515479 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
RUFY3-215ENST00000515479 IFNL1Q8IU54 200 aa14.45□□□□□ -0.1
RUFY3-215ENST00000515479 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
RUFY3-215ENST00000515479 TIE1P35590 1138 aa14.43□□□□□ -0.1
RUFY3-215ENST00000515479 ATN1P54259 1190 aaPredicted RBP14.42□□□□□ -0.1
RUFY3-215ENST00000515479 CIZ1Q9ULV3 898 aaPredicted RBP14.42□□□□□ -0.1
RUFY3-215ENST00000515479 SLC39A7Q92504 469 aa14.38□□□□□ -0.11
RUFY3-215ENST00000515479 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
RUFY3-215ENST00000515479 METRNQ9UJH8 293 aa14.37□□□□□ -0.11
RUFY3-215ENST00000515479 C7P10643 843 aa14.34□□□□□ -0.11
RUFY3-215ENST00000515479 PCDHB8Q9UN66 801 aa14.34□□□□□ -0.11
RUFY3-215ENST00000515479 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
RUFY3-215ENST00000515479 TMEM106CQ9BVX2 250 aa14.32□□□□□ -0.12
RUFY3-215ENST00000515479 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
RUFY3-215ENST00000515479 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
RUFY3-215ENST00000515479 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
RUFY3-215ENST00000515479 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
RUFY3-215ENST00000515479 SEC24BO95487 1268 aa14.19□□□□□ -0.14
RUFY3-215ENST00000515479 IER5LQ5T953 404 aa14.19□□□□□ -0.14
RUFY3-215ENST00000515479 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
RUFY3-215ENST00000515479 PSEN1P49768 467 aa14.16□□□□□ -0.14
RUFY3-215ENST00000515479 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
RUFY3-215ENST00000515479 PDAP1Q13442 181 aaKnown RBP14.13□□□□□ -0.15
RUFY3-215ENST00000515479 OTUD5Q96G74 571 aa14.13□□□□□ -0.15
RUFY3-215ENST00000515479 POTEJP0CG39 1038 aa14.09□□□□□ -0.15
RUFY3-215ENST00000515479 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
RUFY3-215ENST00000515479 PLCG2P16885 1265 aa14.08□□□□□ -0.16
RUFY3-215ENST00000515479 MAMSTRQ6ZN01 415 aa14.06□□□□□ -0.16
RUFY3-215ENST00000515479 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
RUFY3-215ENST00000515479 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
RUFY3-215ENST00000515479 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
RUFY3-215ENST00000515479 RIOK3O14730 519 aaKnown RBP14.01□□□□□ -0.17
RUFY3-215ENST00000515479 RNF25Q96BH1 459 aaPredicted RBP14.01□□□□□ -0.17
RUFY3-215ENST00000515479 OCEL1Q9H607 264 aa14.01□□□□□ -0.17
RUFY3-215ENST00000515479 CABP2Q9NPB3 220 aa14□□□□□ -0.17
RUFY3-215ENST00000515479 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
RUFY3-215ENST00000515479 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
RUFY3-215ENST00000515479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
RUFY3-215ENST00000515479 PKD2Q13563 968 aa13.92□□□□□ -0.18
RUFY3-215ENST00000515479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
RUFY3-215ENST00000515479 PDCD7Q8N8D1 485 aaKnown RBP13.91□□□□□ -0.18
RUFY3-215ENST00000515479 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
RUFY3-215ENST00000515479 TAOK2Q9UL54 1235 aa13.87□□□□□ -0.19
RUFY3-215ENST00000515479 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
RUFY3-215ENST00000515479 RGL2O15211 777 aa13.83□□□□□ -0.2
RUFY3-215ENST00000515479 ILDR1Q86SU0 546 aaPredicted RBP13.82□□□□□ -0.2
RUFY3-215ENST00000515479 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
RUFY3-215ENST00000515479 L3MBTL3Q96JM7 780 aaPredicted RBP13.81□□□□□ -0.2
RUFY3-215ENST00000515479 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
RUFY3-215ENST00000515479 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
RUFY3-215ENST00000515479 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
RUFY3-215ENST00000515479 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
RUFY3-215ENST00000515479 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
RUFY3-215ENST00000515479 STK25O00506 426 aa13.76□□□□□ -0.21
RUFY3-215ENST00000515479 G3V3G9 751 aa13.74□□□□□ -0.21
RUFY3-215ENST00000515479 SOX12O15370 315 aa13.73□□□□□ -0.21
RUFY3-215ENST00000515479 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
RUFY3-215ENST00000515479 FAM163AQ96GL9 167 aaPredicted RBP13.7□□□□□ -0.22
RUFY3-215ENST00000515479 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
RUFY3-215ENST00000515479 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
RUFY3-215ENST00000515479 NLRP6P59044 892 aa13.63□□□□□ -0.23
RUFY3-215ENST00000515479 POTEMA6NI47 508 aa13.62□□□□□ -0.23
RUFY3-215ENST00000515479 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
RUFY3-215ENST00000515479 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
RUFY3-215ENST00000515479 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
RUFY3-215ENST00000515479 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
RUFY3-215ENST00000515479 MFRPQ9BY79 579 aa13.59□□□□□ -0.23
RUFY3-215ENST00000515479 MICALL2Q8IY33 904 aa13.58□□□□□ -0.24
RUFY3-215ENST00000515479 SNPHO15079 494 aa13.57□□□□□ -0.24
RUFY3-215ENST00000515479 ST18O60284 1047 aa13.53□□□□□ -0.24
RUFY3-215ENST00000515479 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
RUFY3-215ENST00000515479 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
RUFY3-215ENST00000515479 TMEM92Q6UXU6 159 aa13.44□□□□□ -0.26
RUFY3-215ENST00000515479 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
RUFY3-215ENST00000515479 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
RUFY3-215ENST00000515479 PPP1R37O75864 691 aa13.37□□□□□ -0.27
RUFY3-215ENST00000515479 MARVELD3Q96A59 401 aa13.37□□□□□ -0.27
RUFY3-215ENST00000515479 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
RUFY3-215ENST00000515479 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
RUFY3-215ENST00000515479 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
RUFY3-215ENST00000515479 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms