RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
CENPE-207ENST00000515478 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
CENPE-207ENST00000515478 KIF12Q96FN5 646 aa17.93■□□□□ 0.46
CENPE-207ENST00000515478 ASTLQ6HA08 431 aaPredicted RBP17.9■□□□□ 0.46
CENPE-207ENST00000515478 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
CENPE-207ENST00000515478 FBXO3Q9UK99 471 aa17.89■□□□□ 0.45
CENPE-207ENST00000515478 ATMINO43313 823 aaPredicted RBP17.88■□□□□ 0.45
CENPE-207ENST00000515478 MAP3K13O43283 966 aa17.85■□□□□ 0.45
CENPE-207ENST00000515478 SLC39A7Q92504 469 aa17.84■□□□□ 0.45
CENPE-207ENST00000515478 METRNQ9UJH8 293 aa17.84■□□□□ 0.45
CENPE-207ENST00000515478 FAM212AQ96EL1 285 aa17.81■□□□□ 0.44
CENPE-207ENST00000515478 C7P10643 843 aa17.8■□□□□ 0.44
CENPE-207ENST00000515478 NUBP1P53384 320 aa17.8■□□□□ 0.44
CENPE-207ENST00000515478 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
CENPE-207ENST00000515478 POTEB2H3BUK9 544 aa17.76■□□□□ 0.43
CENPE-207ENST00000515478 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
CENPE-207ENST00000515478 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
CENPE-207ENST00000515478 TRPC6Q9Y210 931 aa17.73■□□□□ 0.43
CENPE-207ENST00000515478 TIE1P35590 1138 aa17.72■□□□□ 0.43
CENPE-207ENST00000515478 OTUD5Q96G74 571 aa17.71■□□□□ 0.43
CENPE-207ENST00000515478 SGIP1Q9BQI5 828 aa17.68■□□□□ 0.42
CENPE-207ENST00000515478 DCAF8Q5TAQ9 597 aa17.67■□□□□ 0.42
CENPE-207ENST00000515478 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
CENPE-207ENST00000515478 TTLL13PA6NNM8 815 aa17.61■□□□□ 0.41
CENPE-207ENST00000515478 VASPP50552 380 aaPredicted RBP17.61■□□□□ 0.41
CENPE-207ENST00000515478 MAMSTRQ6ZN01 415 aa17.59■□□□□ 0.41
CENPE-207ENST00000515478 IFNL1Q8IU54 200 aa17.57■□□□□ 0.4
CENPE-207ENST00000515478 SEC24BO95487 1268 aa17.56■□□□□ 0.4
CENPE-207ENST00000515478 PYGBP11216 843 aa17.54■□□□□ 0.4
CENPE-207ENST00000515478 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
CENPE-207ENST00000515478 SCUBE2Q9NQ36 999 aa17.53■□□□□ 0.4
CENPE-207ENST00000515478 TMEM106CQ9BVX2 250 aa17.51■□□□□ 0.39
CENPE-207ENST00000515478 POTEJP0CG39 1038 aa17.49■□□□□ 0.39
CENPE-207ENST00000515478 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
CENPE-207ENST00000515478 GSE1Q14687 1217 aa17.45■□□□□ 0.38
CENPE-207ENST00000515478 IER5LQ5T953 404 aa17.45■□□□□ 0.38
CENPE-207ENST00000515478 COLQQ9Y215 455 aaPredicted RBP17.42■□□□□ 0.38
CENPE-207ENST00000515478 PCDHB8Q9UN66 801 aa17.38■□□□□ 0.37
CENPE-207ENST00000515478 PLCG2P16885 1265 aa17.34■□□□□ 0.37
CENPE-207ENST00000515478 ZNF467Q7Z7K2 595 aaPredicted RBP17.3■□□□□ 0.36
CENPE-207ENST00000515478 POTEMA6NI47 508 aa17.29■□□□□ 0.36
CENPE-207ENST00000515478 SPOCK2Q92563 424 aa17.28■□□□□ 0.36
CENPE-207ENST00000515478 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
CENPE-207ENST00000515478 FAM163AQ96GL9 167 aaPredicted RBP17.25■□□□□ 0.35
CENPE-207ENST00000515478 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
CENPE-207ENST00000515478 IFNLR1Q8IU57 520 aaPredicted RBP17.24■□□□□ 0.35
CENPE-207ENST00000515478 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
CENPE-207ENST00000515478 PLSCR2Q9NRY7 297 aa17.22■□□□□ 0.35
CENPE-207ENST00000515478 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
CENPE-207ENST00000515478 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
CENPE-207ENST00000515478 OCEL1Q9H607 264 aa17.19■□□□□ 0.34
CENPE-207ENST00000515478 SLAIN1Q8ND83 568 aa17.15■□□□□ 0.34
CENPE-207ENST00000515478 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
CENPE-207ENST00000515478 PSEN1P49768 467 aa17.12■□□□□ 0.33
CENPE-207ENST00000515478 PDAP1Q13442 181 aaKnown RBP17.06■□□□□ 0.32
CENPE-207ENST00000515478 LCE2DQ5TA82 110 aaPredicted RBP17.03■□□□□ 0.32
CENPE-207ENST00000515478 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.02■□□□□ 0.32
CENPE-207ENST00000515478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
CENPE-207ENST00000515478 PCDH10Q9P2E7 1040 aa17■□□□□ 0.31
CENPE-207ENST00000515478 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
CENPE-207ENST00000515478 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
CENPE-207ENST00000515478 PDCD7Q8N8D1 485 aaKnown RBP16.95■□□□□ 0.3
CENPE-207ENST00000515478 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
CENPE-207ENST00000515478 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
CENPE-207ENST00000515478 SNPHO15079 494 aa16.87■□□□□ 0.29
CENPE-207ENST00000515478 G3V3G9 751 aa16.86■□□□□ 0.29
CENPE-207ENST00000515478 ST18O60284 1047 aa16.86■□□□□ 0.29
CENPE-207ENST00000515478 DPY19L2Q6NUT2 758 aa16.76■□□□□ 0.27
CENPE-207ENST00000515478 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
CENPE-207ENST00000515478 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
CENPE-207ENST00000515478 TMEM121BQ9BXQ6 578 aaPredicted RBP16.73■□□□□ 0.27
CENPE-207ENST00000515478 RIOK3O14730 519 aaKnown RBP16.72■□□□□ 0.27
CENPE-207ENST00000515478 BOLA1Q9Y3E2 137 aa16.72■□□□□ 0.27
CENPE-207ENST00000515478 EFCAB3Q8N7B9 438 aa16.71■□□□□ 0.27
CENPE-207ENST00000515478 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
CENPE-207ENST00000515478 MARVELD3Q96A59 401 aa16.63■□□□□ 0.25
CENPE-207ENST00000515478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
CENPE-207ENST00000515478 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
CENPE-207ENST00000515478 RNF25Q96BH1 459 aaPredicted RBP16.61■□□□□ 0.25
CENPE-207ENST00000515478 EMP3P54852 163 aa16.57■□□□□ 0.24
CENPE-207ENST00000515478 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
CENPE-207ENST00000515478 SOX12O15370 315 aa16.55■□□□□ 0.24
CENPE-207ENST00000515478 ZNF710Q8N1W2 664 aa16.48■□□□□ 0.23
CENPE-207ENST00000515478 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
CENPE-207ENST00000515478 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
CENPE-207ENST00000515478 MICALL2Q8IY33 904 aa16.46■□□□□ 0.23
CENPE-207ENST00000515478 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
CENPE-207ENST00000515478 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
CENPE-207ENST00000515478 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
CENPE-207ENST00000515478 DOK7Q18PE1 504 aa16.43■□□□□ 0.22
CENPE-207ENST00000515478 NLRP6P59044 892 aa16.4■□□□□ 0.22
CENPE-207ENST00000515478 MS4A4AQ96JQ5 239 aa16.4■□□□□ 0.22
CENPE-207ENST00000515478 STK25O00506 426 aa16.39■□□□□ 0.21
CENPE-207ENST00000515478 RIMBP2O15034 1052 aa16.39■□□□□ 0.21
CENPE-207ENST00000515478 HOXB3P14651 431 aaPredicted RBP16.39■□□□□ 0.21
CENPE-207ENST00000515478 HS3ST6Q96QI5 342 aa16.39■□□□□ 0.21
CENPE-207ENST00000515478 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
CENPE-207ENST00000515478 TMEM92Q6UXU6 159 aa16.3■□□□□ 0.2
CENPE-207ENST00000515478 SPNS2Q8IVW8 549 aa16.3■□□□□ 0.2
CENPE-207ENST00000515478 ERBB3P21860 1342 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms