RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
HERC6-208ENST00000515365 DNAJC5Q9H3Z4 198 aa9.17□□□□□ -0.94
HERC6-208ENST00000515365 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
HERC6-208ENST00000515365 PRR29P0C7W0 189 aa9.15□□□□□ -0.94
HERC6-208ENST00000515365 DCAF8Q5TAQ9 597 aa9.15□□□□□ -0.94
HERC6-208ENST00000515365 CLEC11AQ9Y240 323 aa9.15□□□□□ -0.94
HERC6-208ENST00000515365 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
HERC6-208ENST00000515365 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
HERC6-208ENST00000515365 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
HERC6-208ENST00000515365 FAM212AQ96EL1 285 aa9.12□□□□□ -0.95
HERC6-208ENST00000515365 CHRM1P11229 460 aaPredicted RBP9.09□□□□□ -0.95
HERC6-208ENST00000515365 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
HERC6-208ENST00000515365 NKX1-1Q15270 411 aaPredicted RBP9.08□□□□□ -0.96
HERC6-208ENST00000515365 RASEFQ8IZ41 740 aa9.08□□□□□ -0.96
HERC6-208ENST00000515365 VGFO15240 615 aaPredicted RBP9.05□□□□□ -0.96
HERC6-208ENST00000515365 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
HERC6-208ENST00000515365 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
HERC6-208ENST00000515365 STK25O00506 426 aa9.02□□□□□ -0.97
HERC6-208ENST00000515365 GTPBP6O43824 516 aaPredicted RBP9.02□□□□□ -0.97
HERC6-208ENST00000515365 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
HERC6-208ENST00000515365 PYGBP11216 843 aa8.98□□□□□ -0.97
HERC6-208ENST00000515365 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.97□□□□□ -0.97
HERC6-208ENST00000515365 ZFP91Q96JP5 570 aaPredicted RBP8.97□□□□□ -0.97
HERC6-208ENST00000515365 BCL11BQ9C0K0 894 aaPredicted RBP8.96□□□□□ -0.98
HERC6-208ENST00000515365 STK24Q9Y6E0 443 aa8.95□□□□□ -0.98
HERC6-208ENST00000515365 NBR1Q14596 966 aa8.92□□□□□ -0.98
HERC6-208ENST00000515365 RYDENQ9NUL5 291 aaKnown RBP8.92□□□□□ -0.98
HERC6-208ENST00000515365 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
HERC6-208ENST00000515365 FARP1Q9Y4F1 1045 aaPredicted RBP8.88□□□□□ -0.99
HERC6-208ENST00000515365 ZNF467Q7Z7K2 595 aaPredicted RBP8.87□□□□□ -0.99
HERC6-208ENST00000515365 TSPYL2Q9H2G4 693 aaPredicted RBP8.87□□□□□ -0.99
HERC6-208ENST00000515365 PDAP1Q13442 181 aaKnown RBP8.83□□□□□ -1
HERC6-208ENST00000515365 CCDC61Q9Y6R9 512 aa8.81□□□□□ -1
HERC6-208ENST00000515365 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
HERC6-208ENST00000515365 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
HERC6-208ENST00000515365 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
HERC6-208ENST00000515365 ZNF579Q8NAF0 562 aaKnown RBP8.79□□□□□ -1
HERC6-208ENST00000515365 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
HERC6-208ENST00000515365 PSEN1P49768 467 aa8.77□□□□□ -1.01
HERC6-208ENST00000515365 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
HERC6-208ENST00000515365 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
HERC6-208ENST00000515365 MFRPQ9BY79 579 aa8.74□□□□□ -1.01
HERC6-208ENST00000515365 PAK3O75914 559 aaPredicted RBP8.71□□□□□ -1.02
HERC6-208ENST00000515365 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
HERC6-208ENST00000515365 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
HERC6-208ENST00000515365 KCNV2Q8TDN2 545 aa8.69□□□□□ -1.02
HERC6-208ENST00000515365 WDR70Q9NW82 654 aa8.69□□□□□ -1.02
HERC6-208ENST00000515365 MAP3K13O43283 966 aa8.68□□□□□ -1.02
HERC6-208ENST00000515365 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
HERC6-208ENST00000515365 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
HERC6-208ENST00000515365 FBXO22Q8NEZ5 403 aa8.67□□□□□ -1.02
HERC6-208ENST00000515365 NLRP6P59044 892 aa8.66□□□□□ -1.02
HERC6-208ENST00000515365 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
HERC6-208ENST00000515365 SOX12O15370 315 aa8.65□□□□□ -1.02
HERC6-208ENST00000515365 PPP1R37O75864 691 aa8.65□□□□□ -1.02
HERC6-208ENST00000515365 CABP2Q9NPB3 220 aa8.65□□□□□ -1.02
HERC6-208ENST00000515365 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
HERC6-208ENST00000515365 ZRANB1Q9UGI0 708 aa8.6□□□□□ -1.03
HERC6-208ENST00000515365 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
HERC6-208ENST00000515365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
HERC6-208ENST00000515365 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
HERC6-208ENST00000515365 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
HERC6-208ENST00000515365 PHF12Q96QT6 1004 aa8.57□□□□□ -1.04
HERC6-208ENST00000515365 E2F4Q16254 413 aa8.56□□□□□ -1.04
HERC6-208ENST00000515365 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
HERC6-208ENST00000515365 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
HERC6-208ENST00000515365 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
HERC6-208ENST00000515365 MFSD10Q14728 455 aa8.51□□□□□ -1.05
HERC6-208ENST00000515365 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
HERC6-208ENST00000515365 PDE4AP27815 886 aa8.5□□□□□ -1.05
HERC6-208ENST00000515365 LARP6Q9BRS8 491 aaKnown RBP8.5□□□□□ -1.05
HERC6-208ENST00000515365 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
HERC6-208ENST00000515365 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
HERC6-208ENST00000515365 MS4A3Q96HJ5 214 aa8.49□□□□□ -1.05
HERC6-208ENST00000515365 CRISPLD2Q9H0B8 497 aa8.49□□□□□ -1.05
HERC6-208ENST00000515365 TRPC6Q9Y210 931 aa8.49□□□□□ -1.05
HERC6-208ENST00000515365 SEMA3EO15041 775 aa8.48□□□□□ -1.05
HERC6-208ENST00000515365 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.06
HERC6-208ENST00000515365 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
HERC6-208ENST00000515365 DDX27Q96GQ7 796 aaKnown RBP8.46□□□□□ -1.06
HERC6-208ENST00000515365 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
HERC6-208ENST00000515365 TMEM132AQ24JP5 1023 aa8.45□□□□□ -1.06
HERC6-208ENST00000515365 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
HERC6-208ENST00000515365 TIE1P35590 1138 aa8.44□□□□□ -1.06
HERC6-208ENST00000515365 CAMK2BQ13554 666 aa8.44□□□□□ -1.06
HERC6-208ENST00000515365 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
HERC6-208ENST00000515365 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
HERC6-208ENST00000515365 TTLL13PA6NNM8 815 aa8.41□□□□□ -1.06
HERC6-208ENST00000515365 SMYD5Q6GMV2 418 aa8.39□□□□□ -1.07
HERC6-208ENST00000515365 BMP2KQ9NSY1 1161 aaPredicted RBP8.39□□□□□ -1.07
HERC6-208ENST00000515365 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
HERC6-208ENST00000515365 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
HERC6-208ENST00000515365 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
HERC6-208ENST00000515365 GPHNQ9NQX3 736 aaPredicted RBP8.37□□□□□ -1.07
HERC6-208ENST00000515365 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
HERC6-208ENST00000515365 ZMYND10O75800 440 aa8.35□□□□□ -1.07
HERC6-208ENST00000515365 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
HERC6-208ENST00000515365 TRIM35Q9UPQ4 493 aa8.35□□□□□ -1.07
HERC6-208ENST00000515365 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
HERC6-208ENST00000515365 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms