RNA–Protein interactions for RNA: ENST00000515140.1

CENPC-207, Transcript of centromere protein C, humanhuman

TSL 1 (best)

Gene CENPC, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-207ENST00000515140 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
CENPC-207ENST00000515140 NUBP1P53384 320 aa14.16□□□□□ -0.14
CENPC-207ENST00000515140 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
CENPC-207ENST00000515140 POTEIP0CG38 1075 aa14.12□□□□□ -0.15
CENPC-207ENST00000515140 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
CENPC-207ENST00000515140 MS4A3Q96HJ5 214 aa14.09□□□□□ -0.15
CENPC-207ENST00000515140 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
CENPC-207ENST00000515140 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
CENPC-207ENST00000515140 ASTLQ6HA08 431 aaPredicted RBP14□□□□□ -0.17
CENPC-207ENST00000515140 MAP3K13O43283 966 aa13.99□□□□□ -0.17
CENPC-207ENST00000515140 GSE1Q14687 1217 aa13.97□□□□□ -0.17
CENPC-207ENST00000515140 LHX8Q68G74 356 aa13.97□□□□□ -0.17
CENPC-207ENST00000515140 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
CENPC-207ENST00000515140 TIE1P35590 1138 aa13.95□□□□□ -0.18
CENPC-207ENST00000515140 PCDHB13Q9Y5F0 798 aa13.94□□□□□ -0.18
CENPC-207ENST00000515140 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
CENPC-207ENST00000515140 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
CENPC-207ENST00000515140 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
CENPC-207ENST00000515140 SLC39A7Q92504 469 aa13.9□□□□□ -0.18
CENPC-207ENST00000515140 C7P10643 843 aa13.88□□□□□ -0.19
CENPC-207ENST00000515140 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
CENPC-207ENST00000515140 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
CENPC-207ENST00000515140 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
CENPC-207ENST00000515140 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
CENPC-207ENST00000515140 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
CENPC-207ENST00000515140 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
CENPC-207ENST00000515140 PYGBP11216 843 aa13.81□□□□□ -0.2
CENPC-207ENST00000515140 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
CENPC-207ENST00000515140 TRPC6Q9Y210 931 aa13.8□□□□□ -0.2
CENPC-207ENST00000515140 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
CENPC-207ENST00000515140 IER5LQ5T953 404 aa13.76□□□□□ -0.21
CENPC-207ENST00000515140 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
CENPC-207ENST00000515140 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
CENPC-207ENST00000515140 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
CENPC-207ENST00000515140 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
CENPC-207ENST00000515140 MAMSTRQ6ZN01 415 aa13.67□□□□□ -0.22
CENPC-207ENST00000515140 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
CENPC-207ENST00000515140 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
CENPC-207ENST00000515140 SEC24BO95487 1268 aa13.63□□□□□ -0.23
CENPC-207ENST00000515140 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
CENPC-207ENST00000515140 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
CENPC-207ENST00000515140 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
CENPC-207ENST00000515140 SCUBE2Q9NQ36 999 aa13.56□□□□□ -0.24
CENPC-207ENST00000515140 PLCG2P16885 1265 aa13.55□□□□□ -0.24
CENPC-207ENST00000515140 PSEN1P49768 467 aa13.55□□□□□ -0.24
CENPC-207ENST00000515140 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
CENPC-207ENST00000515140 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
CENPC-207ENST00000515140 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
CENPC-207ENST00000515140 OCEL1Q9H607 264 aa13.5□□□□□ -0.25
CENPC-207ENST00000515140 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
CENPC-207ENST00000515140 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
CENPC-207ENST00000515140 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
CENPC-207ENST00000515140 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
CENPC-207ENST00000515140 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
CENPC-207ENST00000515140 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
CENPC-207ENST00000515140 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
CENPC-207ENST00000515140 PDCD7Q8N8D1 485 aaKnown RBP13.35□□□□□ -0.27
CENPC-207ENST00000515140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.279e-7■□□□□ 10
CENPC-207ENST00000515140 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
CENPC-207ENST00000515140 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
CENPC-207ENST00000515140 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
CENPC-207ENST00000515140 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
CENPC-207ENST00000515140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.26□□□□□ -0.29
CENPC-207ENST00000515140 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
CENPC-207ENST00000515140 ZFP91Q96JP5 570 aaPredicted RBP13.26□□□□□ -0.29
CENPC-207ENST00000515140 SOX12O15370 315 aa13.24□□□□□ -0.29
CENPC-207ENST00000515140 PKD2Q13563 968 aa13.24□□□□□ -0.29
CENPC-207ENST00000515140 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
CENPC-207ENST00000515140 EFCAB3Q8N7B9 438 aa13.23□□□□□ -0.29
CENPC-207ENST00000515140 G3V3G9 751 aa13.22□□□□□ -0.29
CENPC-207ENST00000515140 SNPHO15079 494 aa13.17□□□□□ -0.3
CENPC-207ENST00000515140 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
CENPC-207ENST00000515140 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
CENPC-207ENST00000515140 POTEMA6NI47 508 aa13.12□□□□□ -0.31
CENPC-207ENST00000515140 STK25O00506 426 aa13.12□□□□□ -0.31
CENPC-207ENST00000515140 RGL2O15211 777 aa13.12□□□□□ -0.31
CENPC-207ENST00000515140 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
CENPC-207ENST00000515140 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
CENPC-207ENST00000515140 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
CENPC-207ENST00000515140 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
CENPC-207ENST00000515140 NLRP6P59044 892 aa13.1□□□□□ -0.31
CENPC-207ENST00000515140 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
CENPC-207ENST00000515140 LCE2DQ5TA82 110 aaPredicted RBP13.08□□□□□ -0.32
CENPC-207ENST00000515140 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
CENPC-207ENST00000515140 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
CENPC-207ENST00000515140 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
CENPC-207ENST00000515140 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
CENPC-207ENST00000515140 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
CENPC-207ENST00000515140 ST18O60284 1047 aa13□□□□□ -0.33
CENPC-207ENST00000515140 MFRPQ9BY79 579 aa12.98□□□□□ -0.33
CENPC-207ENST00000515140 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
CENPC-207ENST00000515140 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
CENPC-207ENST00000515140 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
CENPC-207ENST00000515140 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
CENPC-207ENST00000515140 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
CENPC-207ENST00000515140 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
CENPC-207ENST00000515140 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
CENPC-207ENST00000515140 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
CENPC-207ENST00000515140 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
CENPC-207ENST00000515140 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms