RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
CAST-242ENST00000515063 GSE1Q14687 1217 aa10.19□□□□□ -0.78
CAST-242ENST00000515063 GABBR2O75899 941 aa10.18□□□□□ -0.78
CAST-242ENST00000515063 DCAF8Q5TAQ9 597 aa10.18□□□□□ -0.78
CAST-242ENST00000515063 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
CAST-242ENST00000515063 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
CAST-242ENST00000515063 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
CAST-242ENST00000515063 KIF12Q96FN5 646 aa10.09□□□□□ -0.79
CAST-242ENST00000515063 SGIP1Q9BQI5 828 aa10.09□□□□□ -0.79
CAST-242ENST00000515063 TRIM41Q8WV44 630 aa10.08□□□□□ -0.8
CAST-242ENST00000515063 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
CAST-242ENST00000515063 MAP3K13O43283 966 aa10.05□□□□□ -0.8
CAST-242ENST00000515063 GALR2O43603 387 aaPredicted RBP10.05□□□□□ -0.8
CAST-242ENST00000515063 MS4A3Q96HJ5 214 aa10.05□□□□□ -0.8
CAST-242ENST00000515063 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
CAST-242ENST00000515063 PYGBP11216 843 aa10.03□□□□□ -0.8
CAST-242ENST00000515063 CHRM1P11229 460 aaPredicted RBP10.03□□□□□ -0.8
CAST-242ENST00000515063 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
CAST-242ENST00000515063 TIE1P35590 1138 aa9.96□□□□□ -0.82
CAST-242ENST00000515063 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
CAST-242ENST00000515063 ASTLQ6HA08 431 aaPredicted RBP9.92□□□□□ -0.82
CAST-242ENST00000515063 POTEIP0CG38 1075 aa9.9□□□□□ -0.82
CAST-242ENST00000515063 ATMINO43313 823 aaPredicted RBP9.89□□□□□ -0.83
CAST-242ENST00000515063 PCDHB8Q9UN66 801 aa9.89□□□□□ -0.83
CAST-242ENST00000515063 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
CAST-242ENST00000515063 BMP2KQ9NSY1 1161 aaPredicted RBP9.88□□□□□ -0.83
CAST-242ENST00000515063 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
CAST-242ENST00000515063 TMEM106CQ9BVX2 250 aa9.87□□□□□ -0.83
CAST-242ENST00000515063 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
CAST-242ENST00000515063 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
CAST-242ENST00000515063 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
CAST-242ENST00000515063 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
CAST-242ENST00000515063 RIOK3O14730 519 aaKnown RBP9.84□□□□□ -0.83
CAST-242ENST00000515063 ATN1P54259 1190 aaPredicted RBP9.84□□□□□ -0.83
CAST-242ENST00000515063 C7P10643 843 aa9.83□□□□□ -0.84
CAST-242ENST00000515063 PSEN1P49768 467 aa9.83□□□□□ -0.84
CAST-242ENST00000515063 PKD2Q13563 968 aa9.83□□□□□ -0.84
CAST-242ENST00000515063 VGFO15240 615 aaPredicted RBP9.81□□□□□ -0.84
CAST-242ENST00000515063 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
CAST-242ENST00000515063 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
CAST-242ENST00000515063 IER5LQ5T953 404 aa9.8□□□□□ -0.84
CAST-242ENST00000515063 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
CAST-242ENST00000515063 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
CAST-242ENST00000515063 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
CAST-242ENST00000515063 SEC24BO95487 1268 aa9.75□□□□□ -0.85
CAST-242ENST00000515063 MKRN3Q13064 507 aaKnown RBP9.75□□□□□ -0.85
CAST-242ENST00000515063 AMER1Q5JTC6 1135 aaPredicted RBP9.73□□□□□ -0.85
CAST-242ENST00000515063 RGL2O15211 777 aa9.72□□□□□ -0.85
CAST-242ENST00000515063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.71□□□□□ -0.86
CAST-242ENST00000515063 LHX8Q68G74 356 aa9.71□□□□□ -0.86
CAST-242ENST00000515063 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
CAST-242ENST00000515063 PLCG2P16885 1265 aa9.7□□□□□ -0.86
CAST-242ENST00000515063 CABP2Q9NPB3 220 aa9.7□□□□□ -0.86
CAST-242ENST00000515063 STK25O00506 426 aa9.67□□□□□ -0.86
CAST-242ENST00000515063 OCEL1Q9H607 264 aa9.67□□□□□ -0.86
CAST-242ENST00000515063 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
CAST-242ENST00000515063 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
CAST-242ENST00000515063 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.86
CAST-242ENST00000515063 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
CAST-242ENST00000515063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.871e-7■■□□□ 14.5
CAST-242ENST00000515063 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
CAST-242ENST00000515063 SOX12O15370 315 aa9.62□□□□□ -0.87
CAST-242ENST00000515063 EFCAB3Q8N7B9 438 aa9.61□□□□□ -0.87
CAST-242ENST00000515063 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
CAST-242ENST00000515063 SCUBE2Q9NQ36 999 aa9.6□□□□□ -0.87
CAST-242ENST00000515063 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
CAST-242ENST00000515063 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
CAST-242ENST00000515063 L3MBTL3Q96JM7 780 aaPredicted RBP9.58□□□□□ -0.88
CAST-242ENST00000515063 G3V3G9 751 aa9.57□□□□□ -0.88
CAST-242ENST00000515063 POTEB2H3BUK9 544 aa9.57□□□□□ -0.88
CAST-242ENST00000515063 CHGAP10645 457 aaKnown RBP9.57□□□□□ -0.88
CAST-242ENST00000515063 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
CAST-242ENST00000515063 PDCD7Q8N8D1 485 aaKnown RBP9.57□□□□□ -0.88
CAST-242ENST00000515063 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
CAST-242ENST00000515063 NLRP6P59044 892 aa9.55□□□□□ -0.88
CAST-242ENST00000515063 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
CAST-242ENST00000515063 C3orf67Q6ZVT6 689 aa9.5□□□□□ -0.89
CAST-242ENST00000515063 OTUD5Q96G74 571 aa9.5□□□□□ -0.89
CAST-242ENST00000515063 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
CAST-242ENST00000515063 POTEJP0CG39 1038 aa9.49□□□□□ -0.89
CAST-242ENST00000515063 DNAJC5Q9H3Z4 198 aa9.49□□□□□ -0.89
CAST-242ENST00000515063 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
CAST-242ENST00000515063 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
CAST-242ENST00000515063 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
CAST-242ENST00000515063 FBXO22Q8NEZ5 403 aa9.46□□□□□ -0.9
CAST-242ENST00000515063 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
CAST-242ENST00000515063 MS4A4AQ96JQ5 239 aa9.44□□□□□ -0.9
CAST-242ENST00000515063 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
CAST-242ENST00000515063 MICALL2Q8IY33 904 aa9.4□□□□□ -0.9
CAST-242ENST00000515063 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
CAST-242ENST00000515063 SNPHO15079 494 aa9.35□□□□□ -0.91
CAST-242ENST00000515063 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
CAST-242ENST00000515063 BBXQ8WY36 941 aaPredicted RBP9.35□□□□□ -0.91
CAST-242ENST00000515063 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
CAST-242ENST00000515063 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
CAST-242ENST00000515063 PPP1R37O75864 691 aa9.28□□□□□ -0.92
CAST-242ENST00000515063 TMC2Q8TDI7 906 aa9.26□□□□□ -0.93
CAST-242ENST00000515063 SPRYD3Q8NCJ5 442 aa9.24□□□□□ -0.93
CAST-242ENST00000515063 FAM163AQ96GL9 167 aaPredicted RBP9.24□□□□□ -0.93
CAST-242ENST00000515063 RIMBP2O15034 1052 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms