RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 ASTLQ6HA08 431 aaPredicted RBP14.99□□□□□ -0.01
NEDD4-211ENST00000514893 FKBP8Q14318 412 aa14.98□□□□□ -0.01
NEDD4-211ENST00000514893 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
NEDD4-211ENST00000514893 KIF12Q96FN5 646 aa14.98□□□□□ -0.01
NEDD4-211ENST00000514893 ATMINO43313 823 aaPredicted RBP14.97□□□□□ -0.01
NEDD4-211ENST00000514893 C7P10643 843 aa14.96□□□□□ -0.01
NEDD4-211ENST00000514893 SLC39A7Q92504 469 aa14.95□□□□□ -0.02
NEDD4-211ENST00000514893 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
NEDD4-211ENST00000514893 POTEB2H3BUK9 544 aa14.9□□□□□ -0.02
NEDD4-211ENST00000514893 OTUD5Q96G74 571 aa14.9□□□□□ -0.02
NEDD4-211ENST00000514893 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
NEDD4-211ENST00000514893 MAP3K13O43283 966 aa14.87□□□□□ -0.03
NEDD4-211ENST00000514893 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
NEDD4-211ENST00000514893 NUBP1P53384 320 aa14.82□□□□□ -0.04
NEDD4-211ENST00000514893 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
NEDD4-211ENST00000514893 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
NEDD4-211ENST00000514893 TIE1P35590 1138 aa14.81□□□□□ -0.04
NEDD4-211ENST00000514893 MAMSTRQ6ZN01 415 aa14.8□□□□□ -0.04
NEDD4-211ENST00000514893 BMP2KQ9NSY1 1161 aaPredicted RBP14.79□□□□□ -0.04
NEDD4-211ENST00000514893 FAM212AQ96EL1 285 aa14.77□□□□□ -0.05
NEDD4-211ENST00000514893 TRPC6Q9Y210 931 aa14.74□□□□□ -0.05
NEDD4-211ENST00000514893 PCDHB13Q9Y5F0 798 aa14.74□□□□□ -0.05
NEDD4-211ENST00000514893 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
NEDD4-211ENST00000514893 POTEJP0CG39 1038 aa14.67□□□□□ -0.06
NEDD4-211ENST00000514893 SCUBE2Q9NQ36 999 aa14.67□□□□□ -0.06
NEDD4-211ENST00000514893 SEC24BO95487 1268 aa14.66□□□□□ -0.06
NEDD4-211ENST00000514893 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
NEDD4-211ENST00000514893 IER5LQ5T953 404 aa14.62□□□□□ -0.07
NEDD4-211ENST00000514893 IFNL1Q8IU54 200 aa14.62□□□□□ -0.07
NEDD4-211ENST00000514893 TRIM35Q9UPQ4 493 aa14.6□□□□□ -0.07
NEDD4-211ENST00000514893 POTEFA5A3E0 1075 aa14.59□□□□□ -0.07
NEDD4-211ENST00000514893 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
NEDD4-211ENST00000514893 TMEM106CQ9BVX2 250 aa14.57□□□□□ -0.08
NEDD4-211ENST00000514893 COLQQ9Y215 455 aaPredicted RBP14.55□□□□□ -0.08
NEDD4-211ENST00000514893 POTEMA6NI47 508 aa14.53□□□□□ -0.08
NEDD4-211ENST00000514893 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
NEDD4-211ENST00000514893 PYGBP11216 843 aa14.52□□□□□ -0.09
NEDD4-211ENST00000514893 GSE1Q14687 1217 aa14.5□□□□□ -0.09
NEDD4-211ENST00000514893 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
NEDD4-211ENST00000514893 PLSCR2Q9NRY7 297 aa14.48□□□□□ -0.09
NEDD4-211ENST00000514893 FAM163AQ96GL9 167 aaPredicted RBP14.47□□□□□ -0.09
NEDD4-211ENST00000514893 PLCG2P16885 1265 aa14.45□□□□□ -0.1
NEDD4-211ENST00000514893 PCDH10Q9P2E7 1040 aa14.44□□□□□ -0.1
NEDD4-211ENST00000514893 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
NEDD4-211ENST00000514893 CHRM1P11229 460 aaPredicted RBP14.38□□□□□ -0.11
NEDD4-211ENST00000514893 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
NEDD4-211ENST00000514893 OCEL1Q9H607 264 aa14.38□□□□□ -0.11
NEDD4-211ENST00000514893 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
NEDD4-211ENST00000514893 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
NEDD4-211ENST00000514893 LCE2DQ5TA82 110 aaPredicted RBP14.3□□□□□ -0.12
NEDD4-211ENST00000514893 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
NEDD4-211ENST00000514893 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
NEDD4-211ENST00000514893 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
NEDD4-211ENST00000514893 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
NEDD4-211ENST00000514893 PSEN1P49768 467 aa14.23□□□□□ -0.13
NEDD4-211ENST00000514893 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
NEDD4-211ENST00000514893 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.21□□□□□ -0.13
NEDD4-211ENST00000514893 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
NEDD4-211ENST00000514893 L3MBTL3Q96JM7 780 aaPredicted RBP14.17□□□□□ -0.14
NEDD4-211ENST00000514893 SNPHO15079 494 aa14.16□□□□□ -0.14
NEDD4-211ENST00000514893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.152e-6■■■■■ 28.3
NEDD4-211ENST00000514893 ST18O60284 1047 aa14.13□□□□□ -0.15
NEDD4-211ENST00000514893 PDCD7Q8N8D1 485 aaKnown RBP14.12□□□□□ -0.15
NEDD4-211ENST00000514893 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
NEDD4-211ENST00000514893 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
NEDD4-211ENST00000514893 CDAN1Q8IWY9 1227 aa14.07□□□□□ -0.16
NEDD4-211ENST00000514893 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
NEDD4-211ENST00000514893 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
NEDD4-211ENST00000514893 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.17
NEDD4-211ENST00000514893 G3V3G9 751 aa13.99□□□□□ -0.17
NEDD4-211ENST00000514893 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
NEDD4-211ENST00000514893 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
NEDD4-211ENST00000514893 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
NEDD4-211ENST00000514893 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
NEDD4-211ENST00000514893 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
NEDD4-211ENST00000514893 EMP3P54852 163 aa13.82□□□□□ -0.2
NEDD4-211ENST00000514893 SOX12O15370 315 aa13.8□□□□□ -0.2
NEDD4-211ENST00000514893 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
NEDD4-211ENST00000514893 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
NEDD4-211ENST00000514893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
NEDD4-211ENST00000514893 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
NEDD4-211ENST00000514893 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
NEDD4-211ENST00000514893 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
NEDD4-211ENST00000514893 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
NEDD4-211ENST00000514893 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
NEDD4-211ENST00000514893 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
NEDD4-211ENST00000514893 HOXB3P14651 431 aaPredicted RBP13.7□□□□□ -0.22
NEDD4-211ENST00000514893 HS3ST6Q96QI5 342 aa13.69□□□□□ -0.22
NEDD4-211ENST00000514893 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
NEDD4-211ENST00000514893 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
NEDD4-211ENST00000514893 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
NEDD4-211ENST00000514893 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
NEDD4-211ENST00000514893 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
NEDD4-211ENST00000514893 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
NEDD4-211ENST00000514893 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
NEDD4-211ENST00000514893 NLRP6P59044 892 aa13.61□□□□□ -0.23
NEDD4-211ENST00000514893 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
NEDD4-211ENST00000514893 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
NEDD4-211ENST00000514893 ERBB3P21860 1342 aa13.59□□□□□ -0.23
NEDD4-211ENST00000514893 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms