RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-223ENST00000514267 RASEFQ8IZ41 740 aa9.42□□□□□ -0.9
CALCOCO2-223ENST00000514267 CCDC61Q9Y6R9 512 aa9.41□□□□□ -0.9
CALCOCO2-223ENST00000514267 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
CALCOCO2-223ENST00000514267 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-223ENST00000514267 TRIM41Q8WV44 630 aa9.38□□□□□ -0.91
CALCOCO2-223ENST00000514267 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
CALCOCO2-223ENST00000514267 DCBLD2Q96PD2 775 aa9.35□□□□□ -0.91
CALCOCO2-223ENST00000514267 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
CALCOCO2-223ENST00000514267 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
CALCOCO2-223ENST00000514267 CHRM1P11229 460 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO2-223ENST00000514267 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
CALCOCO2-223ENST00000514267 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-223ENST00000514267 MS4A3Q96HJ5 214 aa9.27□□□□□ -0.93
CALCOCO2-223ENST00000514267 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-223ENST00000514267 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
CALCOCO2-223ENST00000514267 MAP3K13O43283 966 aa9.25□□□□□ -0.93
CALCOCO2-223ENST00000514267 TIE1P35590 1138 aa9.24□□□□□ -0.93
CALCOCO2-223ENST00000514267 PYGBP11216 843 aa9.22□□□□□ -0.93
CALCOCO2-223ENST00000514267 ASTLQ6HA08 431 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-223ENST00000514267 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
CALCOCO2-223ENST00000514267 SLC39A7Q92504 469 aa9.18□□□□□ -0.94
CALCOCO2-223ENST00000514267 IFNL1Q8IU54 200 aa9.17□□□□□ -0.94
CALCOCO2-223ENST00000514267 ATMINO43313 823 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-223ENST00000514267 C7P10643 843 aa9.15□□□□□ -0.94
CALCOCO2-223ENST00000514267 IER5LQ5T953 404 aa9.14□□□□□ -0.95
CALCOCO2-223ENST00000514267 PDAP1Q13442 181 aaKnown RBP9.13□□□□□ -0.95
CALCOCO2-223ENST00000514267 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
CALCOCO2-223ENST00000514267 POTEIP0CG38 1075 aa9.12□□□□□ -0.95
CALCOCO2-223ENST00000514267 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
CALCOCO2-223ENST00000514267 TMEM106CQ9BVX2 250 aa9.11□□□□□ -0.95
CALCOCO2-223ENST00000514267 GOLGA2Q08379 1002 aa9.09□□□□□ -0.95
CALCOCO2-223ENST00000514267 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-223ENST00000514267 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-223ENST00000514267 PCDHB8Q9UN66 801 aa9.08□□□□□ -0.96
CALCOCO2-223ENST00000514267 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
CALCOCO2-223ENST00000514267 PSEN1P49768 467 aa9.07□□□□□ -0.96
CALCOCO2-223ENST00000514267 METRNQ9UJH8 293 aa9.07□□□□□ -0.96
CALCOCO2-223ENST00000514267 TRIM35Q9UPQ4 493 aa9.07□□□□□ -0.96
CALCOCO2-223ENST00000514267 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
CALCOCO2-223ENST00000514267 TRPC6Q9Y210 931 aa9.04□□□□□ -0.96
CALCOCO2-223ENST00000514267 SEC24BO95487 1268 aa9.03□□□□□ -0.96
CALCOCO2-223ENST00000514267 MKRN3Q13064 507 aaKnown RBP9.03□□□□□ -0.96
CALCOCO2-223ENST00000514267 LHX8Q68G74 356 aa9.03□□□□□ -0.96
CALCOCO2-223ENST00000514267 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
CALCOCO2-223ENST00000514267 PLCG2P16885 1265 aa9□□□□□ -0.97
CALCOCO2-223ENST00000514267 PKD2Q13563 968 aa9□□□□□ -0.97
CALCOCO2-223ENST00000514267 PELP1Q8IZL8 1130 aaKnown RBP9□□□□□ -0.97
CALCOCO2-223ENST00000514267 OCEL1Q9H607 264 aa8.97□□□□□ -0.97
CALCOCO2-223ENST00000514267 RNF25Q96BH1 459 aaPredicted RBP8.95□□□□□ -0.98
CALCOCO2-223ENST00000514267 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
CALCOCO2-223ENST00000514267 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
CALCOCO2-223ENST00000514267 CABP2Q9NPB3 220 aa8.93□□□□□ -0.98
CALCOCO2-223ENST00000514267 SCUBE2Q9NQ36 999 aa8.93□□□□□ -0.98
CALCOCO2-223ENST00000514267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.92□□□□□ -0.98
CALCOCO2-223ENST00000514267 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
CALCOCO2-223ENST00000514267 SOX12O15370 315 aa8.91□□□□□ -0.98
CALCOCO2-223ENST00000514267 L3MBTL3Q96JM7 780 aaPredicted RBP8.91□□□□□ -0.98
CALCOCO2-223ENST00000514267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.982e-8■■■■□ 23.3
CALCOCO2-223ENST00000514267 STK25O00506 426 aa8.89□□□□□ -0.99
CALCOCO2-223ENST00000514267 RGL2O15211 777 aa8.89□□□□□ -0.99
CALCOCO2-223ENST00000514267 G3V3G9 751 aa8.88□□□□□ -0.99
CALCOCO2-223ENST00000514267 ILDR1Q86SU0 546 aaPredicted RBP8.87□□□□□ -0.99
CALCOCO2-223ENST00000514267 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
CALCOCO2-223ENST00000514267 COLQQ9Y215 455 aaPredicted RBP8.87□□□□□ -0.99
CALCOCO2-223ENST00000514267 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
CALCOCO2-223ENST00000514267 RYDENQ9NUL5 291 aaKnown RBP8.85□□□□□ -0.99
CALCOCO2-223ENST00000514267 POTEFA5A3E0 1075 aa8.84□□□□□ -0.99
CALCOCO2-223ENST00000514267 NLRP6P59044 892 aa8.84□□□□□ -0.99
CALCOCO2-223ENST00000514267 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
CALCOCO2-223ENST00000514267 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
CALCOCO2-223ENST00000514267 PDCD7Q8N8D1 485 aaKnown RBP8.83□□□□□ -1
CALCOCO2-223ENST00000514267 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
CALCOCO2-223ENST00000514267 POTEB2H3BUK9 544 aa8.8□□□□□ -1
CALCOCO2-223ENST00000514267 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.8□□□□□ -1
CALCOCO2-223ENST00000514267 OTUD5Q96G74 571 aa8.79□□□□□ -1
CALCOCO2-223ENST00000514267 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
CALCOCO2-223ENST00000514267 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
CALCOCO2-223ENST00000514267 CHGAP10645 457 aaKnown RBP8.76□□□□□ -1.01
CALCOCO2-223ENST00000514267 SNPHO15079 494 aa8.74□□□□□ -1.01
CALCOCO2-223ENST00000514267 DCAF8L2P0C7V8 631 aa8.73□□□□□ -1.01
CALCOCO2-223ENST00000514267 POTEJP0CG39 1038 aa8.73□□□□□ -1.01
CALCOCO2-223ENST00000514267 PHF8Q9UPP1 1060 aa8.73□□□□□ -1.01
CALCOCO2-223ENST00000514267 SLAIN1Q8ND83 568 aa8.72□□□□□ -1.01
CALCOCO2-223ENST00000514267 TMEM121BQ9BXQ6 578 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-223ENST00000514267 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
CALCOCO2-223ENST00000514267 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
CALCOCO2-223ENST00000514267 DPY19L2Q6NUT2 758 aa8.67□□□□□ -1.02
CALCOCO2-223ENST00000514267 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
CALCOCO2-223ENST00000514267 MS4A4AQ96JQ5 239 aa8.67□□□□□ -1.02
CALCOCO2-223ENST00000514267 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
CALCOCO2-223ENST00000514267 RIMBP2O15034 1052 aa8.6□□□□□ -1.03
CALCOCO2-223ENST00000514267 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
CALCOCO2-223ENST00000514267 DOK7Q18PE1 504 aa8.59□□□□□ -1.03
CALCOCO2-223ENST00000514267 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
CALCOCO2-223ENST00000514267 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
CALCOCO2-223ENST00000514267 NKX1-1Q15270 411 aaPredicted RBP8.55□□□□□ -1.04
CALCOCO2-223ENST00000514267 ZSWIM6Q9HCJ5 1215 aa8.55□□□□□ -1.04
CALCOCO2-223ENST00000514267 FAM163AQ96GL9 167 aaPredicted RBP8.54□□□□□ -1.04
CALCOCO2-223ENST00000514267 ZNF710Q8N1W2 664 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms