RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 SPOCK2Q92563 424 aa16.25■□□□□ 0.19
PDE4D-221ENST00000514231 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
PDE4D-221ENST00000514231 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
PDE4D-221ENST00000514231 DCAF8Q5TAQ9 597 aa16.2■□□□□ 0.18
PDE4D-221ENST00000514231 PHF12Q96QT6 1004 aa16.19■□□□□ 0.18
PDE4D-221ENST00000514231 GSE1Q14687 1217 aa16.15■□□□□ 0.18
PDE4D-221ENST00000514231 KIF12Q96FN5 646 aa16.11■□□□□ 0.17
PDE4D-221ENST00000514231 GALR2O43603 387 aaPredicted RBP16.06■□□□□ 0.16
PDE4D-221ENST00000514231 MAP3K13O43283 966 aa16.03■□□□□ 0.16
PDE4D-221ENST00000514231 SGIP1Q9BQI5 828 aa16.03■□□□□ 0.16
PDE4D-221ENST00000514231 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.16
PDE4D-221ENST00000514231 MS4A3Q96HJ5 214 aa16.01■□□□□ 0.15
PDE4D-221ENST00000514231 PYGBP11216 843 aa15.99■□□□□ 0.15
PDE4D-221ENST00000514231 CHRM1P11229 460 aaPredicted RBP15.98■□□□□ 0.15
PDE4D-221ENST00000514231 DCBLD2Q96PD2 775 aa15.95■□□□□ 0.14
PDE4D-221ENST00000514231 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
PDE4D-221ENST00000514231 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
PDE4D-221ENST00000514231 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
PDE4D-221ENST00000514231 IFNL1Q8IU54 200 aa15.88■□□□□ 0.13
PDE4D-221ENST00000514231 TIE1P35590 1138 aa15.82■□□□□ 0.12
PDE4D-221ENST00000514231 TRPC6Q9Y210 931 aa15.82■□□□□ 0.12
PDE4D-221ENST00000514231 ASTLQ6HA08 431 aaPredicted RBP15.81■□□□□ 0.12
PDE4D-221ENST00000514231 ZNF467Q7Z7K2 595 aaPredicted RBP15.81■□□□□ 0.12
PDE4D-221ENST00000514231 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
PDE4D-221ENST00000514231 ATMINO43313 823 aaPredicted RBP15.79■□□□□ 0.12
PDE4D-221ENST00000514231 BMP2KQ9NSY1 1161 aaPredicted RBP15.77■□□□□ 0.12
PDE4D-221ENST00000514231 PKD2Q13563 968 aa15.73■□□□□ 0.11
PDE4D-221ENST00000514231 TTLL13PA6NNM8 815 aa15.72■□□□□ 0.11
PDE4D-221ENST00000514231 ATN1P54259 1190 aaPredicted RBP15.71■□□□□ 0.11
PDE4D-221ENST00000514231 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
PDE4D-221ENST00000514231 TMEM106CQ9BVX2 250 aa15.69■□□□□ 0.1
PDE4D-221ENST00000514231 ECM2O94769 699 aaPredicted RBP15.68■□□□□ 0.1
PDE4D-221ENST00000514231 PDAP1Q13442 181 aaKnown RBP15.64■□□□□ 0.09
PDE4D-221ENST00000514231 PSEN1P49768 467 aa15.63■□□□□ 0.09
PDE4D-221ENST00000514231 SLC39A7Q92504 469 aa15.63■□□□□ 0.09
PDE4D-221ENST00000514231 RIOK3O14730 519 aaKnown RBP15.62■□□□□ 0.09
PDE4D-221ENST00000514231 C7P10643 843 aa15.62■□□□□ 0.09
PDE4D-221ENST00000514231 RNF25Q96BH1 459 aaPredicted RBP15.62■□□□□ 0.09
PDE4D-221ENST00000514231 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
PDE4D-221ENST00000514231 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
PDE4D-221ENST00000514231 METRNQ9UJH8 293 aa15.55■□□□□ 0.08
PDE4D-221ENST00000514231 IER5LQ5T953 404 aa15.54■□□□□ 0.08
PDE4D-221ENST00000514231 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
PDE4D-221ENST00000514231 RGL2O15211 777 aa15.51■□□□□ 0.07
PDE4D-221ENST00000514231 LHX8Q68G74 356 aa15.49■□□□□ 0.07
PDE4D-221ENST00000514231 GOLGA2Q08379 1002 aa15.47■□□□□ 0.07
PDE4D-221ENST00000514231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.07
PDE4D-221ENST00000514231 ZFP91Q96JP5 570 aaPredicted RBP15.46■□□□□ 0.07
PDE4D-221ENST00000514231 SEC24BO95487 1268 aa15.44■□□□□ 0.06
PDE4D-221ENST00000514231 POTEFA5A3E0 1075 aa15.43■□□□□ 0.06
PDE4D-221ENST00000514231 MKRN3Q13064 507 aaKnown RBP15.43■□□□□ 0.06
PDE4D-221ENST00000514231 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
PDE4D-221ENST00000514231 IRX5P78411 483 aaPredicted RBP15.41■□□□□ 0.06
PDE4D-221ENST00000514231 COLQQ9Y215 455 aaPredicted RBP15.41■□□□□ 0.06
PDE4D-221ENST00000514231 POTEB2H3BUK9 544 aa15.39■□□□□ 0.05
PDE4D-221ENST00000514231 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
PDE4D-221ENST00000514231 OCEL1Q9H607 264 aa15.38■□□□□ 0.05
PDE4D-221ENST00000514231 PLCG2P16885 1265 aa15.35■□□□□ 0.05
PDE4D-221ENST00000514231 BCL11BQ9C0K0 894 aaPredicted RBP15.34■□□□□ 0.05
PDE4D-221ENST00000514231 STK25O00506 426 aa15.33■□□□□ 0.04
PDE4D-221ENST00000514231 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
PDE4D-221ENST00000514231 EFCAB3Q8N7B9 438 aa15.32■□□□□ 0.04
PDE4D-221ENST00000514231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDE4D-221ENST00000514231 STK24Q9Y6E0 443 aa15.31■□□□□ 0.04
PDE4D-221ENST00000514231 SOX12O15370 315 aa15.28■□□□□ 0.04
PDE4D-221ENST00000514231 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
PDE4D-221ENST00000514231 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
PDE4D-221ENST00000514231 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
PDE4D-221ENST00000514231 MAMSTRQ6ZN01 415 aa15.24■□□□□ 0.03
PDE4D-221ENST00000514231 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
PDE4D-221ENST00000514231 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
PDE4D-221ENST00000514231 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
PDE4D-221ENST00000514231 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
PDE4D-221ENST00000514231 SCUBE2Q9NQ36 999 aa15.17■□□□□ 0.02
PDE4D-221ENST00000514231 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
PDE4D-221ENST00000514231 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
PDE4D-221ENST00000514231 NLRP6P59044 892 aa15.14■□□□□ 0.01
PDE4D-221ENST00000514231 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
PDE4D-221ENST00000514231 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
PDE4D-221ENST00000514231 MFRPQ9BY79 579 aa15.11■□□□□ 0.01
PDE4D-221ENST00000514231 FBXO22Q8NEZ5 403 aa15.1■□□□□ 0.01
PDE4D-221ENST00000514231 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
PDE4D-221ENST00000514231 BOLA1Q9Y3E2 137 aa15.07■□□□□ 0
PDE4D-221ENST00000514231 G3V3G9 751 aa15.04■□□□□ -0
PDE4D-221ENST00000514231 TMEM121BQ9BXQ6 578 aaPredicted RBP15.03■□□□□ -0
PDE4D-221ENST00000514231 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
PDE4D-221ENST00000514231 C3orf67Q6ZVT6 689 aa14.99□□□□□ -0.01
PDE4D-221ENST00000514231 NKX1-1Q15270 411 aaPredicted RBP14.98□□□□□ -0.01
PDE4D-221ENST00000514231 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
PDE4D-221ENST00000514231 MICALL2Q8IY33 904 aa14.95□□□□□ -0.02
PDE4D-221ENST00000514231 RYDENQ9NUL5 291 aaKnown RBP14.95□□□□□ -0.02
PDE4D-221ENST00000514231 PPP1R37O75864 691 aa14.88□□□□□ -0.03
PDE4D-221ENST00000514231 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
PDE4D-221ENST00000514231 PLSCR2Q9NRY7 297 aa14.86□□□□□ -0.03
PDE4D-221ENST00000514231 GTPBP6O43824 516 aaPredicted RBP14.85□□□□□ -0.03
PDE4D-221ENST00000514231 SNPHO15079 494 aa14.78□□□□□ -0.04
PDE4D-221ENST00000514231 TMEM92Q6UXU6 159 aa14.78□□□□□ -0.04
PDE4D-221ENST00000514231 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
PDE4D-221ENST00000514231 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
PDE4D-221ENST00000514231 KIF3CO14782 793 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms