RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 SGIP1Q9BQI5 828 aa8.82□□□□□ -1
SGCB-203ENST00000514133 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
SGCB-203ENST00000514133 TSPYL2Q9H2G4 693 aaPredicted RBP8.81□□□□□ -1
SGCB-203ENST00000514133 KLHL34Q8N239 644 aa8.8□□□□□ -1
SGCB-203ENST00000514133 RASEFQ8IZ41 740 aa8.79□□□□□ -1
SGCB-203ENST00000514133 DCBLD2Q96PD2 775 aa8.79□□□□□ -1
SGCB-203ENST00000514133 GSE1Q14687 1217 aa8.78□□□□□ -1
SGCB-203ENST00000514133 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
SGCB-203ENST00000514133 KIF12Q96FN5 646 aa8.75□□□□□ -1.01
SGCB-203ENST00000514133 SPOCK2Q92563 424 aa8.74□□□□□ -1.01
SGCB-203ENST00000514133 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
SGCB-203ENST00000514133 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
SGCB-203ENST00000514133 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
SGCB-203ENST00000514133 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
SGCB-203ENST00000514133 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
SGCB-203ENST00000514133 TRIM41Q8WV44 630 aa8.69□□□□□ -1.02
SGCB-203ENST00000514133 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
SGCB-203ENST00000514133 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
SGCB-203ENST00000514133 TIE1P35590 1138 aa8.68□□□□□ -1.02
SGCB-203ENST00000514133 MAP3K13O43283 966 aa8.67□□□□□ -1.02
SGCB-203ENST00000514133 ASTLQ6HA08 431 aaPredicted RBP8.67□□□□□ -1.02
SGCB-203ENST00000514133 POTEIP0CG38 1075 aa8.66□□□□□ -1.02
SGCB-203ENST00000514133 PCDHB13Q9Y5F0 798 aa8.66□□□□□ -1.02
SGCB-203ENST00000514133 HAP1P54257 671 aaPredicted RBP8.65□□□□□ -1.02
SGCB-203ENST00000514133 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
SGCB-203ENST00000514133 C7P10643 843 aa8.62□□□□□ -1.03
SGCB-203ENST00000514133 SLC39A7Q92504 469 aa8.62□□□□□ -1.03
SGCB-203ENST00000514133 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
SGCB-203ENST00000514133 PYGBP11216 843 aa8.58□□□□□ -1.04
SGCB-203ENST00000514133 IER5LQ5T953 404 aa8.57□□□□□ -1.04
SGCB-203ENST00000514133 LHX8Q68G74 356 aa8.57□□□□□ -1.04
SGCB-203ENST00000514133 IFNL1Q8IU54 200 aa8.57□□□□□ -1.04
SGCB-203ENST00000514133 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
SGCB-203ENST00000514133 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
SGCB-203ENST00000514133 TTLL13PA6NNM8 815 aa8.55□□□□□ -1.04
SGCB-203ENST00000514133 PKD2Q13563 968 aa8.54□□□□□ -1.04
SGCB-203ENST00000514133 ATN1P54259 1190 aaPredicted RBP8.53□□□□□ -1.04
SGCB-203ENST00000514133 BCANQ96GW7 911 aa8.51□□□□□ -1.05
SGCB-203ENST00000514133 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
SGCB-203ENST00000514133 METRNQ9UJH8 293 aa8.51□□□□□ -1.05
SGCB-203ENST00000514133 TAOK2Q9UL54 1235 aa8.51□□□□□ -1.05
SGCB-203ENST00000514133 PELP1Q8IZL8 1130 aaKnown RBP8.5□□□□□ -1.05
SGCB-203ENST00000514133 PDAP1Q13442 181 aaKnown RBP8.49□□□□□ -1.05
SGCB-203ENST00000514133 MAMSTRQ6ZN01 415 aa8.49□□□□□ -1.05
SGCB-203ENST00000514133 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
SGCB-203ENST00000514133 TRPC6Q9Y210 931 aa8.48□□□□□ -1.05
SGCB-203ENST00000514133 VSIG10Q8N0Z9 540 aa8.47□□□□□ -1.05
SGCB-203ENST00000514133 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
SGCB-203ENST00000514133 SEC24BO95487 1268 aa8.45□□□□□ -1.06
SGCB-203ENST00000514133 PSEN1P49768 467 aa8.45□□□□□ -1.06
SGCB-203ENST00000514133 PRKCSHP14314 528 aaPredicted RBP8.44□□□□□ -1.06
SGCB-203ENST00000514133 GOLGA2Q08379 1002 aa8.44□□□□□ -1.06
SGCB-203ENST00000514133 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
SGCB-203ENST00000514133 RIOK3O14730 519 aaKnown RBP8.41□□□□□ -1.06
SGCB-203ENST00000514133 ECM2O94769 699 aaPredicted RBP8.41□□□□□ -1.06
SGCB-203ENST00000514133 OCEL1Q9H607 264 aa8.41□□□□□ -1.06
SGCB-203ENST00000514133 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.06
SGCB-203ENST00000514133 PLCG2P16885 1265 aa8.4□□□□□ -1.06
SGCB-203ENST00000514133 MKRN3Q13064 507 aaKnown RBP8.4□□□□□ -1.06
SGCB-203ENST00000514133 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
SGCB-203ENST00000514133 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
SGCB-203ENST00000514133 SCUBE2Q9NQ36 999 aa8.39□□□□□ -1.07
SGCB-203ENST00000514133 PAXIP1Q6ZW49 1069 aaPredicted RBP8.38□□□□□ -1.07
SGCB-203ENST00000514133 CFAP44Q96MT7 982 aa8.38□□□□□ -1.07
SGCB-203ENST00000514133 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
SGCB-203ENST00000514133 POTEFA5A3E0 1075 aa8.35□□□□□ -1.07
SGCB-203ENST00000514133 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
SGCB-203ENST00000514133 OTUD5Q96G74 571 aa8.34□□□□□ -1.07
SGCB-203ENST00000514133 L3MBTL3Q96JM7 780 aaPredicted RBP8.34□□□□□ -1.07
SGCB-203ENST00000514133 COLQQ9Y215 455 aaPredicted RBP8.34□□□□□ -1.07
SGCB-203ENST00000514133 KDM2AQ9Y2K7 1162 aa8.34□□□□□ -1.07
SGCB-203ENST00000514133 SOX12O15370 315 aa8.31□□□□□ -1.08
SGCB-203ENST00000514133 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
SGCB-203ENST00000514133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.31□□□□□ -1.08
SGCB-203ENST00000514133 RGL2O15211 777 aa8.3□□□□□ -1.08
SGCB-203ENST00000514133 CABP2Q9NPB3 220 aa8.3□□□□□ -1.08
SGCB-203ENST00000514133 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
SGCB-203ENST00000514133 PDCD7Q8N8D1 485 aaKnown RBP8.28□□□□□ -1.08
SGCB-203ENST00000514133 SPRYD3Q8NCJ5 442 aa8.28□□□□□ -1.08
SGCB-203ENST00000514133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.27□□□□□ -1.09
SGCB-203ENST00000514133 POTEJP0CG39 1038 aa8.27□□□□□ -1.09
SGCB-203ENST00000514133 ZFP91Q96JP5 570 aaPredicted RBP8.27□□□□□ -1.09
SGCB-203ENST00000514133 G3V3G9 751 aa8.25□□□□□ -1.09
SGCB-203ENST00000514133 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.24□□□□□ -1.09
SGCB-203ENST00000514133 EFCAB3Q8N7B9 438 aa8.23□□□□□ -1.09
SGCB-203ENST00000514133 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
SGCB-203ENST00000514133 CHGAP10645 457 aaKnown RBP8.22□□□□□ -1.09
SGCB-203ENST00000514133 BCL11BQ9C0K0 894 aaPredicted RBP8.22□□□□□ -1.09
SGCB-203ENST00000514133 STK25O00506 426 aa8.21□□□□□ -1.1
SGCB-203ENST00000514133 SNPHO15079 494 aa8.21□□□□□ -1.1
SGCB-203ENST00000514133 NLRP6P59044 892 aa8.21□□□□□ -1.1
SGCB-203ENST00000514133 C3orf67Q6ZVT6 689 aa8.21□□□□□ -1.1
SGCB-203ENST00000514133 STK24Q9Y6E0 443 aa8.2□□□□□ -1.1
SGCB-203ENST00000514133 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
SGCB-203ENST00000514133 SLAIN1Q8ND83 568 aa8.18□□□□□ -1.1
SGCB-203ENST00000514133 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
SGCB-203ENST00000514133 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
SGCB-203ENST00000514133 DNAJC5Q9H3Z4 198 aa8.16□□□□□ -1.1
SGCB-203ENST00000514133 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
SGCB-203ENST00000514133 FBXO22Q8NEZ5 403 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms