RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
PROM1-216ENST00000513946 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
PROM1-216ENST00000513946 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
PROM1-216ENST00000513946 IFNLR1Q8IU57 520 aaPredicted RBP10.36□□□□□ -0.75
PROM1-216ENST00000513946 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
PROM1-216ENST00000513946 MAP3K13O43283 966 aa10.31□□□□□ -0.76
PROM1-216ENST00000513946 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
PROM1-216ENST00000513946 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
PROM1-216ENST00000513946 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
PROM1-216ENST00000513946 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
PROM1-216ENST00000513946 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
PROM1-216ENST00000513946 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
PROM1-216ENST00000513946 SGIP1Q9BQI5 828 aa10.25□□□□□ -0.77
PROM1-216ENST00000513946 ATMINO43313 823 aaPredicted RBP10.24□□□□□ -0.77
PROM1-216ENST00000513946 ASTLQ6HA08 431 aaPredicted RBP10.24□□□□□ -0.77
PROM1-216ENST00000513946 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
PROM1-216ENST00000513946 LHX8Q68G74 356 aa10.21□□□□□ -0.77
PROM1-216ENST00000513946 PYGBP11216 843 aa10.19□□□□□ -0.78
PROM1-216ENST00000513946 GSE1Q14687 1217 aa10.19□□□□□ -0.78
PROM1-216ENST00000513946 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
PROM1-216ENST00000513946 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
PROM1-216ENST00000513946 ATN1P54259 1190 aaPredicted RBP10.18□□□□□ -0.78
PROM1-216ENST00000513946 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
PROM1-216ENST00000513946 TIE1P35590 1138 aa10.17□□□□□ -0.78
PROM1-216ENST00000513946 CHRM1P11229 460 aaPredicted RBP10.16□□□□□ -0.78
PROM1-216ENST00000513946 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
PROM1-216ENST00000513946 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
PROM1-216ENST00000513946 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
PROM1-216ENST00000513946 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
PROM1-216ENST00000513946 C7P10643 843 aa10.09□□□□□ -0.79
PROM1-216ENST00000513946 SLC39A7Q92504 469 aa10.09□□□□□ -0.79
PROM1-216ENST00000513946 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
PROM1-216ENST00000513946 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
PROM1-216ENST00000513946 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
PROM1-216ENST00000513946 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
PROM1-216ENST00000513946 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
PROM1-216ENST00000513946 ZNF467Q7Z7K2 595 aaPredicted RBP10.02□□□□□ -0.81
PROM1-216ENST00000513946 OTUD5Q96G74 571 aa10□□□□□ -0.81
PROM1-216ENST00000513946 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
PROM1-216ENST00000513946 IER5LQ5T953 404 aa9.98□□□□□ -0.81
PROM1-216ENST00000513946 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
PROM1-216ENST00000513946 PSEN1P49768 467 aa9.96□□□□□ -0.82
PROM1-216ENST00000513946 IRX5P78411 483 aaPredicted RBP9.94□□□□□ -0.82
PROM1-216ENST00000513946 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
PROM1-216ENST00000513946 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
PROM1-216ENST00000513946 PKD2Q13563 968 aa9.9□□□□□ -0.82
PROM1-216ENST00000513946 SEC24BO95487 1268 aa9.89□□□□□ -0.83
PROM1-216ENST00000513946 ILDR1Q86SU0 546 aaPredicted RBP9.86□□□□□ -0.83
PROM1-216ENST00000513946 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
PROM1-216ENST00000513946 RIOK3O14730 519 aaKnown RBP9.84□□□□□ -0.83
PROM1-216ENST00000513946 PLCG2P16885 1265 aa9.83□□□□□ -0.84
PROM1-216ENST00000513946 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
PROM1-216ENST00000513946 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
PROM1-216ENST00000513946 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
PROM1-216ENST00000513946 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
PROM1-216ENST00000513946 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
PROM1-216ENST00000513946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.79□□□□□ -0.84
PROM1-216ENST00000513946 VGFO15240 615 aaPredicted RBP9.79□□□□□ -0.84
PROM1-216ENST00000513946 ZFP91Q96JP5 570 aaPredicted RBP9.79□□□□□ -0.84
PROM1-216ENST00000513946 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
PROM1-216ENST00000513946 RGL2O15211 777 aa9.77□□□□□ -0.85
PROM1-216ENST00000513946 EFCAB3Q8N7B9 438 aa9.77□□□□□ -0.85
PROM1-216ENST00000513946 SCUBE2Q9NQ36 999 aa9.77□□□□□ -0.85
PROM1-216ENST00000513946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.77□□□□□ -0.85
PROM1-216ENST00000513946 DPY19L2Q6NUT2 758 aa9.76□□□□□ -0.85
PROM1-216ENST00000513946 SOX12O15370 315 aa9.69□□□□□ -0.86
PROM1-216ENST00000513946 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
PROM1-216ENST00000513946 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
PROM1-216ENST00000513946 BCL11BQ9C0K0 894 aaPredicted RBP9.68□□□□□ -0.86
PROM1-216ENST00000513946 SLAIN1Q8ND83 568 aa9.67□□□□□ -0.86
PROM1-216ENST00000513946 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
PROM1-216ENST00000513946 TAOK2Q9UL54 1235 aa9.67□□□□□ -0.86
PROM1-216ENST00000513946 TMEM121BQ9BXQ6 578 aaPredicted RBP9.65□□□□□ -0.86
PROM1-216ENST00000513946 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
PROM1-216ENST00000513946 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
PROM1-216ENST00000513946 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.64□□□□□ -0.87
PROM1-216ENST00000513946 STK25O00506 426 aa9.63□□□□□ -0.87
PROM1-216ENST00000513946 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
PROM1-216ENST00000513946 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
PROM1-216ENST00000513946 FAM163AQ96GL9 167 aaPredicted RBP9.61□□□□□ -0.87
PROM1-216ENST00000513946 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
PROM1-216ENST00000513946 POTEMA6NI47 508 aa9.59□□□□□ -0.87
PROM1-216ENST00000513946 NLRP6P59044 892 aa9.58□□□□□ -0.88
PROM1-216ENST00000513946 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
PROM1-216ENST00000513946 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
PROM1-216ENST00000513946 MICALL2Q8IY33 904 aa9.55□□□□□ -0.88
PROM1-216ENST00000513946 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
PROM1-216ENST00000513946 HS6ST3Q8IZP7 471 aa9.54□□□□□ -0.88
PROM1-216ENST00000513946 ST18O60284 1047 aa9.53□□□□□ -0.88
PROM1-216ENST00000513946 DNAJC5Q9H3Z4 198 aa9.52□□□□□ -0.89
PROM1-216ENST00000513946 G3V3G9 751 aa9.5□□□□□ -0.89
PROM1-216ENST00000513946 PPP1R37O75864 691 aa9.49□□□□□ -0.89
PROM1-216ENST00000513946 PCDH10Q9P2E7 1040 aa9.49□□□□□ -0.89
PROM1-216ENST00000513946 SNPHO15079 494 aa9.48□□□□□ -0.89
PROM1-216ENST00000513946 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
PROM1-216ENST00000513946 NKX1-1Q15270 411 aaPredicted RBP9.47□□□□□ -0.89
PROM1-216ENST00000513946 HOXB3P14651 431 aaPredicted RBP9.46□□□□□ -0.9
PROM1-216ENST00000513946 KIF3CO14782 793 aa9.41□□□□□ -0.9
PROM1-216ENST00000513946 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
PROM1-216ENST00000513946 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms