RNA–Protein interactions for RNA: ENST00000513597.5

RUFY3-212, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-212ENST00000513597 RNF25Q96BH1 459 aaPredicted RBP14.56□□□□□ -0.08
RUFY3-212ENST00000513597 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
RUFY3-212ENST00000513597 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
RUFY3-212ENST00000513597 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
RUFY3-212ENST00000513597 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
RUFY3-212ENST00000513597 DCAF8Q5TAQ9 597 aa14.48□□□□□ -0.09
RUFY3-212ENST00000513597 CHRM1P11229 460 aaPredicted RBP14.47□□□□□ -0.09
RUFY3-212ENST00000513597 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
RUFY3-212ENST00000513597 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
RUFY3-212ENST00000513597 TAOK2Q9UL54 1235 aa14.44□□□□□ -0.1
RUFY3-212ENST00000513597 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
RUFY3-212ENST00000513597 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
RUFY3-212ENST00000513597 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
RUFY3-212ENST00000513597 NKX1-1Q15270 411 aaPredicted RBP14.36□□□□□ -0.11
RUFY3-212ENST00000513597 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
RUFY3-212ENST00000513597 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
RUFY3-212ENST00000513597 GTPBP6O43824 516 aaPredicted RBP14.31□□□□□ -0.12
RUFY3-212ENST00000513597 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
RUFY3-212ENST00000513597 STK25O00506 426 aa14.25□□□□□ -0.13
RUFY3-212ENST00000513597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
RUFY3-212ENST00000513597 PYGBP11216 843 aa14.19□□□□□ -0.14
RUFY3-212ENST00000513597 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
RUFY3-212ENST00000513597 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
RUFY3-212ENST00000513597 RYDENQ9NUL5 291 aaKnown RBP14.15□□□□□ -0.14
RUFY3-212ENST00000513597 TPRNQ4KMQ1 711 aa14.14□□□□□ -0.15
RUFY3-212ENST00000513597 STK24Q9Y6E0 443 aa14.14□□□□□ -0.15
RUFY3-212ENST00000513597 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
RUFY3-212ENST00000513597 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
RUFY3-212ENST00000513597 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
RUFY3-212ENST00000513597 NBR1Q14596 966 aa14.05□□□□□ -0.16
RUFY3-212ENST00000513597 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.17
RUFY3-212ENST00000513597 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
RUFY3-212ENST00000513597 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
RUFY3-212ENST00000513597 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
RUFY3-212ENST00000513597 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
RUFY3-212ENST00000513597 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
RUFY3-212ENST00000513597 PCDHB8Q9UN66 801 aa13.92□□□□□ -0.18
RUFY3-212ENST00000513597 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
RUFY3-212ENST00000513597 PSEN1P49768 467 aa13.88□□□□□ -0.19
RUFY3-212ENST00000513597 MFRPQ9BY79 579 aa13.85□□□□□ -0.19
RUFY3-212ENST00000513597 CADPS2Q86UW7 1296 aa13.83□□□□□ -0.2
RUFY3-212ENST00000513597 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
RUFY3-212ENST00000513597 IFNL1Q8IU54 200 aa13.8□□□□□ -0.2
RUFY3-212ENST00000513597 KIF12Q96FN5 646 aa13.8□□□□□ -0.2
RUFY3-212ENST00000513597 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
RUFY3-212ENST00000513597 MAP3K13O43283 966 aa13.77□□□□□ -0.21
RUFY3-212ENST00000513597 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
RUFY3-212ENST00000513597 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
RUFY3-212ENST00000513597 SOX12O15370 315 aa13.75□□□□□ -0.21
RUFY3-212ENST00000513597 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
RUFY3-212ENST00000513597 WDR70Q9NW82 654 aa13.74□□□□□ -0.21
RUFY3-212ENST00000513597 NLRP6P59044 892 aa13.71□□□□□ -0.21
RUFY3-212ENST00000513597 KCNV2Q8TDN2 545 aa13.71□□□□□ -0.21
RUFY3-212ENST00000513597 PPP1R37O75864 691 aa13.7□□□□□ -0.22
RUFY3-212ENST00000513597 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
RUFY3-212ENST00000513597 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
RUFY3-212ENST00000513597 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
RUFY3-212ENST00000513597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.61□□□□□ -0.23
RUFY3-212ENST00000513597 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
RUFY3-212ENST00000513597 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
RUFY3-212ENST00000513597 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
RUFY3-212ENST00000513597 E2F4Q16254 413 aa13.56□□□□□ -0.24
RUFY3-212ENST00000513597 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
RUFY3-212ENST00000513597 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
RUFY3-212ENST00000513597 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
RUFY3-212ENST00000513597 NCKAP5LQ9HCH0 1330 aa13.52□□□□□ -0.25
RUFY3-212ENST00000513597 MFSD10Q14728 455 aa13.51□□□□□ -0.25
RUFY3-212ENST00000513597 PDE4AP27815 886 aa13.49□□□□□ -0.25
RUFY3-212ENST00000513597 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
RUFY3-212ENST00000513597 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
RUFY3-212ENST00000513597 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
RUFY3-212ENST00000513597 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
RUFY3-212ENST00000513597 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
RUFY3-212ENST00000513597 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
RUFY3-212ENST00000513597 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
RUFY3-212ENST00000513597 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
RUFY3-212ENST00000513597 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
RUFY3-212ENST00000513597 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
RUFY3-212ENST00000513597 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
RUFY3-212ENST00000513597 CAMK2BQ13554 666 aa13.41□□□□□ -0.26
RUFY3-212ENST00000513597 TIE1P35590 1138 aa13.4□□□□□ -0.26
RUFY3-212ENST00000513597 SEMA3EO15041 775 aa13.39□□□□□ -0.27
RUFY3-212ENST00000513597 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
RUFY3-212ENST00000513597 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
RUFY3-212ENST00000513597 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
RUFY3-212ENST00000513597 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
RUFY3-212ENST00000513597 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
RUFY3-212ENST00000513597 SMYD5Q6GMV2 418 aa13.3□□□□□ -0.28
RUFY3-212ENST00000513597 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
RUFY3-212ENST00000513597 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
RUFY3-212ENST00000513597 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
RUFY3-212ENST00000513597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■□□□□ 10.3
RUFY3-212ENST00000513597 CLCN6P51797 869 aa13.25□□□□□ -0.29
RUFY3-212ENST00000513597 ZMYND10O75800 440 aa13.24□□□□□ -0.29
RUFY3-212ENST00000513597 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
RUFY3-212ENST00000513597 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
RUFY3-212ENST00000513597 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
RUFY3-212ENST00000513597 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
RUFY3-212ENST00000513597 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
RUFY3-212ENST00000513597 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms