RNA–Protein interactions for RNA: ENST00000513316.1

RAB3C-204, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-204ENST00000513316 CHRM1P11229 460 aaPredicted RBP14.09□□□□□ -0.15
RAB3C-204ENST00000513316 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
RAB3C-204ENST00000513316 C19orf67A6NJJ6 358 aa14.08□□□□□ -0.16
RAB3C-204ENST00000513316 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
RAB3C-204ENST00000513316 POTEHQ6S545 545 aa14.05□□□□□ -0.16
RAB3C-204ENST00000513316 ZRANB1Q9UGI0 708 aa14.03□□□□□ -0.16
RAB3C-204ENST00000513316 PYGBP11216 843 aa14.01□□□□□ -0.17
RAB3C-204ENST00000513316 RGL2O15211 777 aa14□□□□□ -0.17
RAB3C-204ENST00000513316 HAX1O00165 279 aa13.99□□□□□ -0.17
RAB3C-204ENST00000513316 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
RAB3C-204ENST00000513316 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
RAB3C-204ENST00000513316 TAOK2Q9UL54 1235 aa13.94□□□□□ -0.18
RAB3C-204ENST00000513316 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
RAB3C-204ENST00000513316 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
RAB3C-204ENST00000513316 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
RAB3C-204ENST00000513316 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
RAB3C-204ENST00000513316 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
RAB3C-204ENST00000513316 CLCN6P51797 869 aa13.87□□□□□ -0.19
RAB3C-204ENST00000513316 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
RAB3C-204ENST00000513316 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
RAB3C-204ENST00000513316 MAP3K13O43283 966 aa13.86□□□□□ -0.19
RAB3C-204ENST00000513316 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
RAB3C-204ENST00000513316 EVX2Q03828 476 aa13.82□□□□□ -0.2
RAB3C-204ENST00000513316 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
RAB3C-204ENST00000513316 PCDHB8Q9UN66 801 aa13.79□□□□□ -0.2
RAB3C-204ENST00000513316 PDAP1Q13442 181 aaKnown RBP13.77□□□□□ -0.21
RAB3C-204ENST00000513316 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
RAB3C-204ENST00000513316 HS6ST3Q8IZP7 471 aa13.75□□□□□ -0.21
RAB3C-204ENST00000513316 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
RAB3C-204ENST00000513316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
RAB3C-204ENST00000513316 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
RAB3C-204ENST00000513316 STK25O00506 426 aa13.71□□□□□ -0.21
RAB3C-204ENST00000513316 PSEN1P49768 467 aa13.71□□□□□ -0.21
RAB3C-204ENST00000513316 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
RAB3C-204ENST00000513316 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
RAB3C-204ENST00000513316 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
RAB3C-204ENST00000513316 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
RAB3C-204ENST00000513316 STK24Q9Y6E0 443 aa13.65□□□□□ -0.22
RAB3C-204ENST00000513316 TIE1P35590 1138 aa13.64□□□□□ -0.23
RAB3C-204ENST00000513316 GABBR2O75899 941 aa13.63□□□□□ -0.23
RAB3C-204ENST00000513316 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
RAB3C-204ENST00000513316 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
RAB3C-204ENST00000513316 TMEM106CQ9BVX2 250 aa13.59□□□□□ -0.23
RAB3C-204ENST00000513316 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
RAB3C-204ENST00000513316 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
RAB3C-204ENST00000513316 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
RAB3C-204ENST00000513316 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
RAB3C-204ENST00000513316 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
RAB3C-204ENST00000513316 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
RAB3C-204ENST00000513316 RYDENQ9NUL5 291 aaKnown RBP13.5□□□□□ -0.25
RAB3C-204ENST00000513316 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
RAB3C-204ENST00000513316 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
RAB3C-204ENST00000513316 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
RAB3C-204ENST00000513316 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
RAB3C-204ENST00000513316 SOX12O15370 315 aa13.47□□□□□ -0.25
RAB3C-204ENST00000513316 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
RAB3C-204ENST00000513316 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.25
RAB3C-204ENST00000513316 TRIM35Q9UPQ4 493 aa13.46□□□□□ -0.25
RAB3C-204ENST00000513316 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
RAB3C-204ENST00000513316 ATN1P54259 1190 aaPredicted RBP13.44□□□□□ -0.26
RAB3C-204ENST00000513316 MKRN3Q13064 507 aaKnown RBP13.44□□□□□ -0.26
RAB3C-204ENST00000513316 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
RAB3C-204ENST00000513316 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
RAB3C-204ENST00000513316 NLRP6P59044 892 aa13.4□□□□□ -0.26
RAB3C-204ENST00000513316 MFRPQ9BY79 579 aa13.39□□□□□ -0.27
RAB3C-204ENST00000513316 IER5LQ5T953 404 aa13.38□□□□□ -0.27
RAB3C-204ENST00000513316 FBXO22Q8NEZ5 403 aa13.35□□□□□ -0.27
RAB3C-204ENST00000513316 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
RAB3C-204ENST00000513316 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
RAB3C-204ENST00000513316 ILDR1Q86SU0 546 aaPredicted RBP13.33□□□□□ -0.28
RAB3C-204ENST00000513316 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
RAB3C-204ENST00000513316 SLC39A7Q92504 469 aa13.31□□□□□ -0.28
RAB3C-204ENST00000513316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB3C-204ENST00000513316 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
RAB3C-204ENST00000513316 IRX5P78411 483 aaPredicted RBP13.28□□□□□ -0.28
RAB3C-204ENST00000513316 C7P10643 843 aa13.27□□□□□ -0.29
RAB3C-204ENST00000513316 OCEL1Q9H607 264 aa13.27□□□□□ -0.29
RAB3C-204ENST00000513316 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
RAB3C-204ENST00000513316 MS4A4AQ96JQ5 239 aa13.26□□□□□ -0.29
RAB3C-204ENST00000513316 PLCG2P16885 1265 aa13.23□□□□□ -0.29
RAB3C-204ENST00000513316 PDCD7Q8N8D1 485 aaKnown RBP13.22□□□□□ -0.29
RAB3C-204ENST00000513316 SEC24BO95487 1268 aa13.21□□□□□ -0.29
RAB3C-204ENST00000513316 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
RAB3C-204ENST00000513316 PPP1R37O75864 691 aa13.19□□□□□ -0.3
RAB3C-204ENST00000513316 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
RAB3C-204ENST00000513316 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
RAB3C-204ENST00000513316 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
RAB3C-204ENST00000513316 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
RAB3C-204ENST00000513316 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
RAB3C-204ENST00000513316 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
RAB3C-204ENST00000513316 G3V3G9 751 aa13.1□□□□□ -0.31
RAB3C-204ENST00000513316 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
RAB3C-204ENST00000513316 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
RAB3C-204ENST00000513316 TMEM121BQ9BXQ6 578 aaPredicted RBP13.07□□□□□ -0.32
RAB3C-204ENST00000513316 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
RAB3C-204ENST00000513316 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
RAB3C-204ENST00000513316 PDE4AP27815 886 aa12.98□□□□□ -0.33
RAB3C-204ENST00000513316 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
RAB3C-204ENST00000513316 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
RAB3C-204ENST00000513316 WDR70Q9NW82 654 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms