RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 RASEFQ8IZ41 740 aa14.33□□□□□ -0.12
DHFR-207ENST00000513314 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
DHFR-207ENST00000513314 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
DHFR-207ENST00000513314 NUBP1P53384 320 aa14.27□□□□□ -0.13
DHFR-207ENST00000513314 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
DHFR-207ENST00000513314 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
DHFR-207ENST00000513314 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
DHFR-207ENST00000513314 ASTLQ6HA08 431 aaPredicted RBP14.19□□□□□ -0.14
DHFR-207ENST00000513314 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
DHFR-207ENST00000513314 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
DHFR-207ENST00000513314 ATMINO43313 823 aaPredicted RBP14.15□□□□□ -0.14
DHFR-207ENST00000513314 MAP3K13O43283 966 aa14.13□□□□□ -0.15
DHFR-207ENST00000513314 DCAF8Q5TAQ9 597 aa14.11□□□□□ -0.15
DHFR-207ENST00000513314 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
DHFR-207ENST00000513314 SLC39A7Q92504 469 aa14.08□□□□□ -0.16
DHFR-207ENST00000513314 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
DHFR-207ENST00000513314 C7P10643 843 aa14.06□□□□□ -0.16
DHFR-207ENST00000513314 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
DHFR-207ENST00000513314 METRNQ9UJH8 293 aa14.04□□□□□ -0.16
DHFR-207ENST00000513314 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
DHFR-207ENST00000513314 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
DHFR-207ENST00000513314 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
DHFR-207ENST00000513314 GSE1Q14687 1217 aa14.02□□□□□ -0.17
DHFR-207ENST00000513314 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
DHFR-207ENST00000513314 TIE1P35590 1138 aa14.01□□□□□ -0.17
DHFR-207ENST00000513314 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
DHFR-207ENST00000513314 SPOCK2Q92563 424 aa14□□□□□ -0.17
DHFR-207ENST00000513314 PYGBP11216 843 aa13.97□□□□□ -0.17
DHFR-207ENST00000513314 IFNL1Q8IU54 200 aa13.95□□□□□ -0.18
DHFR-207ENST00000513314 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
DHFR-207ENST00000513314 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
DHFR-207ENST00000513314 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
DHFR-207ENST00000513314 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
DHFR-207ENST00000513314 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
DHFR-207ENST00000513314 MAMSTRQ6ZN01 415 aa13.85□□□□□ -0.19
DHFR-207ENST00000513314 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
DHFR-207ENST00000513314 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
DHFR-207ENST00000513314 IER5LQ5T953 404 aa13.81□□□□□ -0.2
DHFR-207ENST00000513314 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
DHFR-207ENST00000513314 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
DHFR-207ENST00000513314 COLQQ9Y215 455 aaPredicted RBP13.77□□□□□ -0.21
DHFR-207ENST00000513314 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
DHFR-207ENST00000513314 SEC24BO95487 1268 aa13.75□□□□□ -0.21
DHFR-207ENST00000513314 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
DHFR-207ENST00000513314 PSEN1P49768 467 aa13.66□□□□□ -0.22
DHFR-207ENST00000513314 PDAP1Q13442 181 aaKnown RBP13.64□□□□□ -0.23
DHFR-207ENST00000513314 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
DHFR-207ENST00000513314 POTEMA6NI47 508 aa13.61□□□□□ -0.23
DHFR-207ENST00000513314 PLCG2P16885 1265 aa13.61□□□□□ -0.23
DHFR-207ENST00000513314 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
DHFR-207ENST00000513314 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
DHFR-207ENST00000513314 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
DHFR-207ENST00000513314 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
DHFR-207ENST00000513314 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
DHFR-207ENST00000513314 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
DHFR-207ENST00000513314 RIOK3O14730 519 aaKnown RBP13.5□□□□□ -0.25
DHFR-207ENST00000513314 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
DHFR-207ENST00000513314 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
DHFR-207ENST00000513314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.257e-43■■□□□ 14
DHFR-207ENST00000513314 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
DHFR-207ENST00000513314 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
DHFR-207ENST00000513314 VGFO15240 615 aaPredicted RBP13.44□□□□□ -0.26
DHFR-207ENST00000513314 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
DHFR-207ENST00000513314 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
DHFR-207ENST00000513314 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
DHFR-207ENST00000513314 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
DHFR-207ENST00000513314 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
DHFR-207ENST00000513314 PKD2Q13563 968 aa13.39□□□□□ -0.27
DHFR-207ENST00000513314 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
DHFR-207ENST00000513314 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
DHFR-207ENST00000513314 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
DHFR-207ENST00000513314 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
DHFR-207ENST00000513314 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
DHFR-207ENST00000513314 ST18O60284 1047 aa13.3□□□□□ -0.28
DHFR-207ENST00000513314 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
DHFR-207ENST00000513314 SOX12O15370 315 aa13.29□□□□□ -0.28
DHFR-207ENST00000513314 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
DHFR-207ENST00000513314 RGL2O15211 777 aa13.28□□□□□ -0.28
DHFR-207ENST00000513314 G3V3G9 751 aa13.27□□□□□ -0.29
DHFR-207ENST00000513314 SNPHO15079 494 aa13.27□□□□□ -0.29
DHFR-207ENST00000513314 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
DHFR-207ENST00000513314 BOLA1Q9Y3E2 137 aa13.25□□□□□ -0.29
DHFR-207ENST00000513314 STK24Q9Y6E0 443 aa13.25□□□□□ -0.29
DHFR-207ENST00000513314 STK25O00506 426 aa13.23□□□□□ -0.29
DHFR-207ENST00000513314 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
DHFR-207ENST00000513314 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
DHFR-207ENST00000513314 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
DHFR-207ENST00000513314 NLRP6P59044 892 aa13.16□□□□□ -0.3
DHFR-207ENST00000513314 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
DHFR-207ENST00000513314 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
DHFR-207ENST00000513314 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
DHFR-207ENST00000513314 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
DHFR-207ENST00000513314 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
DHFR-207ENST00000513314 HS6ST3Q8IZP7 471 aa13.02□□□□□ -0.33
DHFR-207ENST00000513314 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
DHFR-207ENST00000513314 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
DHFR-207ENST00000513314 EMP3P54852 163 aa12.98□□□□□ -0.33
DHFR-207ENST00000513314 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
DHFR-207ENST00000513314 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
DHFR-207ENST00000513314 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms