RNA–Protein interactions for RNA: ENST00000513144.1

SERF1B-206, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-206ENST00000513144 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
SERF1B-206ENST00000513144 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
SERF1B-206ENST00000513144 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
SERF1B-206ENST00000513144 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
SERF1B-206ENST00000513144 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
SERF1B-206ENST00000513144 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
SERF1B-206ENST00000513144 CLCN6P51797 869 aa13.77□□□□□ -0.21
SERF1B-206ENST00000513144 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
SERF1B-206ENST00000513144 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
SERF1B-206ENST00000513144 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
SERF1B-206ENST00000513144 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
SERF1B-206ENST00000513144 DCBLD2Q96PD2 775 aa13.7□□□□□ -0.22
SERF1B-206ENST00000513144 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
SERF1B-206ENST00000513144 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
SERF1B-206ENST00000513144 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
SERF1B-206ENST00000513144 GSE1Q14687 1217 aa13.59□□□□□ -0.23
SERF1B-206ENST00000513144 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
SERF1B-206ENST00000513144 MAP3K13O43283 966 aa13.57□□□□□ -0.24
SERF1B-206ENST00000513144 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
SERF1B-206ENST00000513144 PYGBP11216 843 aa13.54□□□□□ -0.24
SERF1B-206ENST00000513144 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
SERF1B-206ENST00000513144 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
SERF1B-206ENST00000513144 PKD2Q13563 968 aa13.48□□□□□ -0.25
SERF1B-206ENST00000513144 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
SERF1B-206ENST00000513144 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
SERF1B-206ENST00000513144 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
SERF1B-206ENST00000513144 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
SERF1B-206ENST00000513144 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
SERF1B-206ENST00000513144 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
SERF1B-206ENST00000513144 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
SERF1B-206ENST00000513144 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
SERF1B-206ENST00000513144 ASTLQ6HA08 431 aaPredicted RBP13.35□□□□□ -0.27
SERF1B-206ENST00000513144 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
SERF1B-206ENST00000513144 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
SERF1B-206ENST00000513144 TIE1P35590 1138 aa13.34□□□□□ -0.27
SERF1B-206ENST00000513144 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
SERF1B-206ENST00000513144 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
SERF1B-206ENST00000513144 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
SERF1B-206ENST00000513144 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
SERF1B-206ENST00000513144 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
SERF1B-206ENST00000513144 RGL2O15211 777 aa13.28□□□□□ -0.28
SERF1B-206ENST00000513144 LCE2DQ5TA82 110 aaPredicted RBP13.27□□□□□ -0.29
SERF1B-206ENST00000513144 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
SERF1B-206ENST00000513144 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
SERF1B-206ENST00000513144 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
SERF1B-206ENST00000513144 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
SERF1B-206ENST00000513144 PSEN1P49768 467 aa13.21□□□□□ -0.29
SERF1B-206ENST00000513144 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
SERF1B-206ENST00000513144 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
SERF1B-206ENST00000513144 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
SERF1B-206ENST00000513144 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
SERF1B-206ENST00000513144 METRNQ9UJH8 293 aa13.17□□□□□ -0.3
SERF1B-206ENST00000513144 C7P10643 843 aa13.16□□□□□ -0.3
SERF1B-206ENST00000513144 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
SERF1B-206ENST00000513144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
SERF1B-206ENST00000513144 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
SERF1B-206ENST00000513144 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
SERF1B-206ENST00000513144 IER5LQ5T953 404 aa13.09□□□□□ -0.31
SERF1B-206ENST00000513144 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
SERF1B-206ENST00000513144 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
SERF1B-206ENST00000513144 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
SERF1B-206ENST00000513144 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
SERF1B-206ENST00000513144 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
SERF1B-206ENST00000513144 SEC24BO95487 1268 aa13.04□□□□□ -0.32
SERF1B-206ENST00000513144 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
SERF1B-206ENST00000513144 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
SERF1B-206ENST00000513144 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
SERF1B-206ENST00000513144 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
SERF1B-206ENST00000513144 STK25O00506 426 aa13.01□□□□□ -0.33
SERF1B-206ENST00000513144 SCUBE2Q9NQ36 999 aa12.99□□□□□ -0.33
SERF1B-206ENST00000513144 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
SERF1B-206ENST00000513144 PLCG2P16885 1265 aa12.98□□□□□ -0.33
SERF1B-206ENST00000513144 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
SERF1B-206ENST00000513144 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
SERF1B-206ENST00000513144 CHGAP10645 457 aaKnown RBP12.96□□□□□ -0.33
SERF1B-206ENST00000513144 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
SERF1B-206ENST00000513144 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
SERF1B-206ENST00000513144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
SERF1B-206ENST00000513144 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
SERF1B-206ENST00000513144 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
SERF1B-206ENST00000513144 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
SERF1B-206ENST00000513144 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
SERF1B-206ENST00000513144 SOX12O15370 315 aa12.86□□□□□ -0.35
SERF1B-206ENST00000513144 NKX1-1Q15270 411 aaPredicted RBP12.85□□□□□ -0.35
SERF1B-206ENST00000513144 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
SERF1B-206ENST00000513144 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
SERF1B-206ENST00000513144 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
SERF1B-206ENST00000513144 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
SERF1B-206ENST00000513144 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
SERF1B-206ENST00000513144 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
SERF1B-206ENST00000513144 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
SERF1B-206ENST00000513144 NLRP6P59044 892 aa12.77□□□□□ -0.37
SERF1B-206ENST00000513144 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
SERF1B-206ENST00000513144 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.37
SERF1B-206ENST00000513144 G3V3G9 751 aa12.69□□□□□ -0.38
SERF1B-206ENST00000513144 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
SERF1B-206ENST00000513144 PPP1R37O75864 691 aa12.69□□□□□ -0.38
SERF1B-206ENST00000513144 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
SERF1B-206ENST00000513144 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
SERF1B-206ENST00000513144 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms