RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
CHD1-209ENST00000512844 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
CHD1-209ENST00000512844 HAX1O00165 279 aa14.57□□□□□ -0.08
CHD1-209ENST00000512844 PKD2Q13563 968 aa14.54□□□□□ -0.08
CHD1-209ENST00000512844 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
CHD1-209ENST00000512844 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
CHD1-209ENST00000512844 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
CHD1-209ENST00000512844 PYGBP11216 843 aa14.46□□□□□ -0.09
CHD1-209ENST00000512844 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
CHD1-209ENST00000512844 CHRM1P11229 460 aaPredicted RBP14.41□□□□□ -0.1
CHD1-209ENST00000512844 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
CHD1-209ENST00000512844 ZNF579Q8NAF0 562 aaKnown RBP14.37□□□□□ -0.11
CHD1-209ENST00000512844 EVX2Q03828 476 aa14.34□□□□□ -0.11
CHD1-209ENST00000512844 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
CHD1-209ENST00000512844 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
CHD1-209ENST00000512844 RGL2O15211 777 aa14.33□□□□□ -0.12
CHD1-209ENST00000512844 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
CHD1-209ENST00000512844 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
CHD1-209ENST00000512844 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
CHD1-209ENST00000512844 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
CHD1-209ENST00000512844 CLCN6P51797 869 aa14.29□□□□□ -0.12
CHD1-209ENST00000512844 MAP3K13O43283 966 aa14.28□□□□□ -0.12
CHD1-209ENST00000512844 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
CHD1-209ENST00000512844 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
CHD1-209ENST00000512844 PCDHB8Q9UN66 801 aa14.22□□□□□ -0.13
CHD1-209ENST00000512844 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
CHD1-209ENST00000512844 IFNL1Q8IU54 200 aa14.19□□□□□ -0.14
CHD1-209ENST00000512844 MS4A3Q96HJ5 214 aa14.18□□□□□ -0.14
CHD1-209ENST00000512844 CHGAP10645 457 aaKnown RBP14.16□□□□□ -0.14
CHD1-209ENST00000512844 STK25O00506 426 aa14.14□□□□□ -0.15
CHD1-209ENST00000512844 PSEN1P49768 467 aa14.13□□□□□ -0.15
CHD1-209ENST00000512844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
CHD1-209ENST00000512844 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
CHD1-209ENST00000512844 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
CHD1-209ENST00000512844 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
CHD1-209ENST00000512844 GABBR2O75899 941 aa14.08□□□□□ -0.16
CHD1-209ENST00000512844 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
CHD1-209ENST00000512844 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
CHD1-209ENST00000512844 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
CHD1-209ENST00000512844 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
CHD1-209ENST00000512844 TIE1P35590 1138 aa14.04□□□□□ -0.16
CHD1-209ENST00000512844 DCBLD2Q96PD2 775 aa14.03□□□□□ -0.16
CHD1-209ENST00000512844 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.03□□□□□ -0.16
CHD1-209ENST00000512844 BBXQ8WY36 941 aaPredicted RBP13.99□□□□□ -0.17
CHD1-209ENST00000512844 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
CHD1-209ENST00000512844 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CHD1-209ENST00000512844 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
CHD1-209ENST00000512844 BMP2KQ9NSY1 1161 aaPredicted RBP13.95□□□□□ -0.18
CHD1-209ENST00000512844 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
CHD1-209ENST00000512844 RYDENQ9NUL5 291 aaKnown RBP13.9□□□□□ -0.18
CHD1-209ENST00000512844 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
CHD1-209ENST00000512844 ATMINO43313 823 aaPredicted RBP13.87□□□□□ -0.19
CHD1-209ENST00000512844 ASTLQ6HA08 431 aaPredicted RBP13.87□□□□□ -0.19
CHD1-209ENST00000512844 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
CHD1-209ENST00000512844 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
CHD1-209ENST00000512844 ATN1P54259 1190 aaPredicted RBP13.85□□□□□ -0.19
CHD1-209ENST00000512844 SOX12O15370 315 aa13.84□□□□□ -0.19
CHD1-209ENST00000512844 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
CHD1-209ENST00000512844 CFAP44Q96MT7 982 aa13.83□□□□□ -0.2
CHD1-209ENST00000512844 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
CHD1-209ENST00000512844 NLRP6P59044 892 aa13.81□□□□□ -0.2
CHD1-209ENST00000512844 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
CHD1-209ENST00000512844 IER5LQ5T953 404 aa13.78□□□□□ -0.2
CHD1-209ENST00000512844 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
CHD1-209ENST00000512844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■■□ 25.6
CHD1-209ENST00000512844 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
CHD1-209ENST00000512844 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
CHD1-209ENST00000512844 SEC24BO95487 1268 aa13.75□□□□□ -0.21
CHD1-209ENST00000512844 LHX8Q68G74 356 aa13.74□□□□□ -0.21
CHD1-209ENST00000512844 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
CHD1-209ENST00000512844 PLCG2P16885 1265 aa13.73□□□□□ -0.21
CHD1-209ENST00000512844 C7P10643 843 aa13.72□□□□□ -0.21
CHD1-209ENST00000512844 MFRPQ9BY79 579 aa13.72□□□□□ -0.21
CHD1-209ENST00000512844 G3V3G9 751 aa13.68□□□□□ -0.22
CHD1-209ENST00000512844 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
CHD1-209ENST00000512844 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
CHD1-209ENST00000512844 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
CHD1-209ENST00000512844 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
CHD1-209ENST00000512844 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
CHD1-209ENST00000512844 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
CHD1-209ENST00000512844 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
CHD1-209ENST00000512844 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
CHD1-209ENST00000512844 MS4A4AQ96JQ5 239 aa13.57□□□□□ -0.24
CHD1-209ENST00000512844 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
CHD1-209ENST00000512844 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
CHD1-209ENST00000512844 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
CHD1-209ENST00000512844 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
CHD1-209ENST00000512844 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
CHD1-209ENST00000512844 PPP1R37O75864 691 aa13.51□□□□□ -0.25
CHD1-209ENST00000512844 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
CHD1-209ENST00000512844 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
CHD1-209ENST00000512844 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
CHD1-209ENST00000512844 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
CHD1-209ENST00000512844 POTEFA5A3E0 1075 aa13.44□□□□□ -0.26
CHD1-209ENST00000512844 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
CHD1-209ENST00000512844 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
CHD1-209ENST00000512844 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
CHD1-209ENST00000512844 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
CHD1-209ENST00000512844 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
CHD1-209ENST00000512844 TMEM121BQ9BXQ6 578 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms