RNA–Protein interactions for RNA: ENST00000512836.5

COL6A5-205, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-205ENST00000512836 NEUROD2Q15784 382 aa7.01□□□□□ -1.29
COL6A5-205ENST00000512836 KCTD17Q8N5Z5 321 aa7.01□□□□□ -1.29
COL6A5-205ENST00000512836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.01□□□□□ -1.29
COL6A5-205ENST00000512836 ZNF428Q96B54 188 aa6.99□□□□□ -1.29
COL6A5-205ENST00000512836 RAD21O60216 631 aa6.99□□□□□ -1.29
COL6A5-205ENST00000512836 LMOD2Q6P5Q4 547 aa6.98□□□□□ -1.29
COL6A5-205ENST00000512836 BCL11AQ9H165 835 aa6.98□□□□□ -1.29
COL6A5-205ENST00000512836 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
COL6A5-205ENST00000512836 ARID3CA6NKF2 412 aa6.97□□□□□ -1.29
COL6A5-205ENST00000512836 PDE4CQ08493 712 aa6.97□□□□□ -1.29
COL6A5-205ENST00000512836 TAF7LQ5H9L4 462 aa6.97□□□□□ -1.29
COL6A5-205ENST00000512836 MAPK8IP2Q13387 824 aaPredicted RBP6.95□□□□□ -1.3
COL6A5-205ENST00000512836 APBB1O00213 710 aa6.93□□□□□ -1.3
COL6A5-205ENST00000512836 CHGAP10645 457 aaKnown RBP6.93□□□□□ -1.3
COL6A5-205ENST00000512836 ATF5Q9Y2D1 282 aaPredicted RBP6.92□□□□□ -1.3
COL6A5-205ENST00000512836 TRAIPQ9BWF2 469 aa6.92□□□□□ -1.3
COL6A5-205ENST00000512836 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
COL6A5-205ENST00000512836 FOXD4L4Q8WXT5 416 aaPredicted RBP6.91□□□□□ -1.3
COL6A5-205ENST00000512836 RBM25P49756 843 aaKnown RBP6.9□□□□□ -1.3
COL6A5-205ENST00000512836 ZNF692Q9BU19 519 aaPredicted RBP6.9□□□□□ -1.3
COL6A5-205ENST00000512836 SLC24A3Q9HC58 644 aa6.9□□□□□ -1.31
COL6A5-205ENST00000512836 FAM9AQ8IZU1 332 aaPredicted RBP6.88□□□□□ -1.31
COL6A5-205ENST00000512836 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
COL6A5-205ENST00000512836 SPDYE4A6NLX3 237 aa6.87□□□□□ -1.31
COL6A5-205ENST00000512836 FAM177A1Q8N128 213 aaPredicted RBP6.86□□□□□ -1.31
COL6A5-205ENST00000512836 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
COL6A5-205ENST00000512836 SPOCK2Q92563 424 aa6.85□□□□□ -1.31
COL6A5-205ENST00000512836 CCDC82Q8N4S0 544 aa6.85□□□□□ -1.31
COL6A5-205ENST00000512836 HS6ST3Q8IZP7 471 aa6.84□□□□□ -1.31
COL6A5-205ENST00000512836 RNF216Q9NWF9 866 aaPredicted RBP6.84□□□□□ -1.31
COL6A5-205ENST00000512836 POLR3GLQ9BT43 218 aa6.83□□□□□ -1.32
COL6A5-205ENST00000512836 BCCIPQ9P287 314 aaKnown RBP eCLIP6.83□□□□□ -1.32
COL6A5-205ENST00000512836 TMCO4Q5TGY1 634 aa6.83□□□□□ -1.32
COL6A5-205ENST00000512836 NKX1-1Q15270 411 aaPredicted RBP6.83□□□□□ -1.32
COL6A5-205ENST00000512836 MKRN3Q13064 507 aaKnown RBP6.82□□□□□ -1.32
COL6A5-205ENST00000512836 PIAS4Q8N2W9 510 aaPredicted RBP6.81□□□□□ -1.32
COL6A5-205ENST00000512836 GTPBP6O43824 516 aaPredicted RBP6.81□□□□□ -1.32
COL6A5-205ENST00000512836 E9PSI1 815 aa6.8□□□□□ -1.32
COL6A5-205ENST00000512836 NEFLP07196 543 aa6.8□□□□□ -1.32
COL6A5-205ENST00000512836 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
COL6A5-205ENST00000512836 P3H3Q8IVL6 736 aa6.8□□□□□ -1.32
COL6A5-205ENST00000512836 CCDC180Q9P1Z9 1646 aa6.79□□□□□ -1.32
COL6A5-205ENST00000512836 RSPH4AQ5TD94 716 aa6.79□□□□□ -1.32
COL6A5-205ENST00000512836 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
COL6A5-205ENST00000512836 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
COL6A5-205ENST00000512836 GZF1Q9H116 711 aaPredicted RBP6.77□□□□□ -1.33
COL6A5-205ENST00000512836 SCAF1Q9H7N4 1312 aaKnown RBP6.77□□□□□ -1.33
COL6A5-205ENST00000512836 BCL11BQ9C0K0 894 aaPredicted RBP6.76□□□□□ -1.33
COL6A5-205ENST00000512836 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
COL6A5-205ENST00000512836 BRPF3Q9ULD4 1205 aa6.76□□□□□ -1.33
COL6A5-205ENST00000512836 ZMYND10O75800 440 aa6.74□□□□□ -1.33
COL6A5-205ENST00000512836 CCDC125Q86Z20 511 aa6.74□□□□□ -1.33
COL6A5-205ENST00000512836 CERS3Q8IU89 383 aa6.74□□□□□ -1.33
COL6A5-205ENST00000512836 IL27Q8NEV9 243 aa6.74□□□□□ -1.33
COL6A5-205ENST00000512836 GPBP1L1Q9HC44 474 aaPredicted RBP6.74□□□□□ -1.33
COL6A5-205ENST00000512836 TICAM2Q86XR7 235 aa6.74□□□□□ -1.33
COL6A5-205ENST00000512836 ZFP91Q96JP5 570 aaPredicted RBP6.74□□□□□ -1.33
COL6A5-205ENST00000512836 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.73□□□□□ -1.33
COL6A5-205ENST00000512836 CC2D2BQ6DHV5 1058 aa6.72□□□□□ -1.33
COL6A5-205ENST00000512836 ZNF592Q92610 1267 aa6.72□□□□□ -1.33
COL6A5-205ENST00000512836 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
COL6A5-205ENST00000512836 IRF5Q13568 498 aa6.71□□□□□ -1.34
COL6A5-205ENST00000512836 TRAK2O60296 914 aa6.71□□□□□ -1.34
COL6A5-205ENST00000512836 FGD1P98174 961 aa6.71□□□□□ -1.34
COL6A5-205ENST00000512836 ONECUT3O60422 494 aaPredicted RBP6.7□□□□□ -1.34
COL6A5-205ENST00000512836 TMED8Q6PL24 325 aaPredicted RBP6.7□□□□□ -1.34
COL6A5-205ENST00000512836 A6NJR5 290 aa6.69□□□□□ -1.34
COL6A5-205ENST00000512836 IGSF5Q9NSI5 407 aa6.69□□□□□ -1.34
COL6A5-205ENST00000512836 CADPSQ9ULU8 1353 aa6.69□□□□□ -1.34
COL6A5-205ENST00000512836 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
COL6A5-205ENST00000512836 CLSTN1O94985 981 aa6.67□□□□□ -1.34
COL6A5-205ENST00000512836 WDR70Q9NW82 654 aa6.67□□□□□ -1.34
COL6A5-205ENST00000512836 RETREG2Q8NC44 543 aa6.67□□□□□ -1.34
COL6A5-205ENST00000512836 PSMD1Q99460 953 aa6.67□□□□□ -1.34
COL6A5-205ENST00000512836 AMOTL2Q9Y2J4 779 aa6.67□□□□□ -1.34
COL6A5-205ENST00000512836 KDM4CQ9H3R0 1056 aa6.66□□□□□ -1.34
COL6A5-205ENST00000512836 ZNF316A6NFI3 1004 aaPredicted RBP6.66□□□□□ -1.34
COL6A5-205ENST00000512836 FLIIQ13045 1269 aa6.66□□□□□ -1.34
COL6A5-205ENST00000512836 PKNOX2Q96KN3 472 aa6.66□□□□□ -1.34
COL6A5-205ENST00000512836 MKRN4PQ13434 485 aaPredicted RBP6.65□□□□□ -1.34
COL6A5-205ENST00000512836 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
COL6A5-205ENST00000512836 CLUAP1Q96AJ1 413 aa6.65□□□□□ -1.34
COL6A5-205ENST00000512836 RNF25Q96BH1 459 aaPredicted RBP6.65□□□□□ -1.35
COL6A5-205ENST00000512836 PRDM16Q9HAZ2 1276 aa6.64□□□□□ -1.35
COL6A5-205ENST00000512836 FBXW7Q969H0 707 aa6.62□□□□□ -1.35
COL6A5-205ENST00000512836 CCDC27Q2M243 656 aa6.61□□□□□ -1.35
COL6A5-205ENST00000512836 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
COL6A5-205ENST00000512836 ARIH1Q9Y4X5 557 aaPredicted RBP6.61□□□□□ -1.35
COL6A5-205ENST00000512836 UNCXA6NJT0 531 aa6.6□□□□□ -1.35
COL6A5-205ENST00000512836 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
COL6A5-205ENST00000512836 CANXP27824 592 aaKnown RBP6.58□□□□□ -1.36
COL6A5-205ENST00000512836 AK7Q96M32 723 aa6.58□□□□□ -1.36
COL6A5-205ENST00000512836 KDM4AO75164 1064 aa6.58□□□□□ -1.36
COL6A5-205ENST00000512836 HOXD11P31277 338 aaPredicted RBP6.58□□□□□ -1.36
COL6A5-205ENST00000512836 ZCCHC6Q5VYS8 1495 aaKnown RBP6.57□□□□□ -1.36
COL6A5-205ENST00000512836 SERPINA10Q9UK55 444 aa6.57□□□□□ -1.36
COL6A5-205ENST00000512836 SEMA3EO15041 775 aa6.56□□□□□ -1.36
COL6A5-205ENST00000512836 ZNF326Q5BKZ1 582 aaKnown RBP6.56□□□□□ -1.36
COL6A5-205ENST00000512836 CADPS2Q86UW7 1296 aa6.56□□□□□ -1.36
COL6A5-205ENST00000512836 POLA2Q14181 598 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms