RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
RFC1-214ENST00000512726 NUBP1P53384 320 aa15.33■□□□□ 0.04
RFC1-214ENST00000512726 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
RFC1-214ENST00000512726 NKX1-1Q15270 411 aaPredicted RBP15.25■□□□□ 0.03
RFC1-214ENST00000512726 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
RFC1-214ENST00000512726 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
RFC1-214ENST00000512726 SPDYE1Q8NFV5 336 aaPredicted RBP15.23■□□□□ 0.03
RFC1-214ENST00000512726 STK25O00506 426 aa15.22■□□□□ 0.03
RFC1-214ENST00000512726 VGFO15240 615 aaPredicted RBP15.22■□□□□ 0.03
RFC1-214ENST00000512726 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
RFC1-214ENST00000512726 RYDENQ9NUL5 291 aaKnown RBP15.15■□□□□ 0.02
RFC1-214ENST00000512726 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
RFC1-214ENST00000512726 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
RFC1-214ENST00000512726 SGIP1Q9BQI5 828 aa15.11■□□□□ 0.01
RFC1-214ENST00000512726 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
RFC1-214ENST00000512726 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
RFC1-214ENST00000512726 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
RFC1-214ENST00000512726 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
RFC1-214ENST00000512726 STK24Q9Y6E0 443 aa15.07■□□□□ 0
RFC1-214ENST00000512726 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
RFC1-214ENST00000512726 BCL11BQ9C0K0 894 aaPredicted RBP15.06■□□□□ 0
RFC1-214ENST00000512726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.04■□□□□ -0
RFC1-214ENST00000512726 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
RFC1-214ENST00000512726 RASEFQ8IZ41 740 aa15.03■□□□□ -0
RFC1-214ENST00000512726 PYGBP11216 843 aa14.96□□□□□ -0.01
RFC1-214ENST00000512726 P3H3Q8IVL6 736 aa14.95□□□□□ -0.02
RFC1-214ENST00000512726 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
RFC1-214ENST00000512726 WDR70Q9NW82 654 aa14.85□□□□□ -0.03
RFC1-214ENST00000512726 GTF3C3Q9Y5Q9 886 aa14.84□□□□□ -0.03
RFC1-214ENST00000512726 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
RFC1-214ENST00000512726 TULP1O00294 542 aaPredicted RBP14.8□□□□□ -0.04
RFC1-214ENST00000512726 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
RFC1-214ENST00000512726 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
RFC1-214ENST00000512726 TMEM132AQ24JP5 1023 aa14.76□□□□□ -0.05
RFC1-214ENST00000512726 PDAP1Q13442 181 aaKnown RBP14.74□□□□□ -0.05
RFC1-214ENST00000512726 PITPNM1O00562 1244 aa14.73□□□□□ -0.05
RFC1-214ENST00000512726 KCNV2Q8TDN2 545 aa14.73□□□□□ -0.05
RFC1-214ENST00000512726 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
RFC1-214ENST00000512726 CADPS2Q86UW7 1296 aa14.7□□□□□ -0.06
RFC1-214ENST00000512726 LMOD2Q6P5Q4 547 aa14.69□□□□□ -0.06
RFC1-214ENST00000512726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.67□□□□□ -0.06
RFC1-214ENST00000512726 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
RFC1-214ENST00000512726 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
RFC1-214ENST00000512726 PSEN1P49768 467 aa14.61□□□□□ -0.07
RFC1-214ENST00000512726 MFRPQ9BY79 579 aa14.6□□□□□ -0.07
RFC1-214ENST00000512726 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
RFC1-214ENST00000512726 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
RFC1-214ENST00000512726 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
RFC1-214ENST00000512726 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
RFC1-214ENST00000512726 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
RFC1-214ENST00000512726 NLRP6P59044 892 aa14.5□□□□□ -0.09
RFC1-214ENST00000512726 E2F4Q16254 413 aa14.5□□□□□ -0.09
RFC1-214ENST00000512726 SOX12O15370 315 aa14.47□□□□□ -0.09
RFC1-214ENST00000512726 PPP1R37O75864 691 aa14.45□□□□□ -0.1
RFC1-214ENST00000512726 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
RFC1-214ENST00000512726 C14orf37Q86TY3 774 aa14.45□□□□□ -0.1
RFC1-214ENST00000512726 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
RFC1-214ENST00000512726 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
RFC1-214ENST00000512726 FBXO22Q8NEZ5 403 aa14.44□□□□□ -0.1
RFC1-214ENST00000512726 ZC3H15Q8WU90 426 aaKnown RBP14.44□□□□□ -0.1
RFC1-214ENST00000512726 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
RFC1-214ENST00000512726 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
RFC1-214ENST00000512726 ARXQ96QS3 562 aa14.41□□□□□ -0.1
RFC1-214ENST00000512726 TESPA1A2RU30 521 aaPredicted RBP14.4□□□□□ -0.1
RFC1-214ENST00000512726 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
RFC1-214ENST00000512726 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
RFC1-214ENST00000512726 SEMA3EO15041 775 aa14.38□□□□□ -0.11
RFC1-214ENST00000512726 MAP3K13O43283 966 aa14.35□□□□□ -0.11
RFC1-214ENST00000512726 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
RFC1-214ENST00000512726 SMYD5Q6GMV2 418 aa14.35□□□□□ -0.11
RFC1-214ENST00000512726 PDE4AP27815 886 aa14.33□□□□□ -0.12
RFC1-214ENST00000512726 KIF12Q96FN5 646 aa14.33□□□□□ -0.12
RFC1-214ENST00000512726 SLC24A3Q9HC58 644 aa14.32□□□□□ -0.12
RFC1-214ENST00000512726 LARP6Q9BRS8 491 aaKnown RBP14.31□□□□□ -0.12
RFC1-214ENST00000512726 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
RFC1-214ENST00000512726 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.136e-6■■■■□ 25.8
RFC1-214ENST00000512726 MFSD10Q14728 455 aa14.26□□□□□ -0.13
RFC1-214ENST00000512726 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
RFC1-214ENST00000512726 ZMYND10O75800 440 aa14.24□□□□□ -0.13
RFC1-214ENST00000512726 DDX27Q96GQ7 796 aaKnown RBP14.24□□□□□ -0.13
RFC1-214ENST00000512726 CRISPLD2Q9H0B8 497 aa14.22□□□□□ -0.13
RFC1-214ENST00000512726 GOLGA2Q08379 1002 aa14.21□□□□□ -0.13
RFC1-214ENST00000512726 MS4A4AQ96JQ5 239 aa14.2□□□□□ -0.14
RFC1-214ENST00000512726 CAMK2BQ13554 666 aa14.16□□□□□ -0.14
RFC1-214ENST00000512726 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
RFC1-214ENST00000512726 HOMEZQ8IX15 550 aa14.16□□□□□ -0.14
RFC1-214ENST00000512726 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
RFC1-214ENST00000512726 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
RFC1-214ENST00000512726 AK7Q96M32 723 aa14.09□□□□□ -0.15
RFC1-214ENST00000512726 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
RFC1-214ENST00000512726 MKRN3Q13064 507 aaKnown RBP14.08□□□□□ -0.16
RFC1-214ENST00000512726 GPIHBP1Q8IV16 184 aa14.08□□□□□ -0.16
RFC1-214ENST00000512726 KRI1Q8N9T8 703 aaKnown RBP14.06□□□□□ -0.16
RFC1-214ENST00000512726 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
RFC1-214ENST00000512726 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
RFC1-214ENST00000512726 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
RFC1-214ENST00000512726 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
RFC1-214ENST00000512726 RBM26Q5T8P6 1007 aaKnown RBP14.03□□□□□ -0.16
RFC1-214ENST00000512726 MLLT3P42568 568 aaPredicted RBP14.02□□□□□ -0.17
RFC1-214ENST00000512726 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms