RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 DNAJC5Q9H3Z4 198 aa9.51□□□□□ -0.89
PDS5A-209ENST00000512643 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
PDS5A-209ENST00000512643 NUBP1P53384 320 aa9.45□□□□□ -0.9
PDS5A-209ENST00000512643 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
PDS5A-209ENST00000512643 NKX1-1Q15270 411 aaPredicted RBP9.42□□□□□ -0.9
PDS5A-209ENST00000512643 STK25O00506 426 aa9.39□□□□□ -0.91
PDS5A-209ENST00000512643 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
PDS5A-209ENST00000512643 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
PDS5A-209ENST00000512643 SPDYE1Q8NFV5 336 aaPredicted RBP9.38□□□□□ -0.91
PDS5A-209ENST00000512643 VGFO15240 615 aaPredicted RBP9.37□□□□□ -0.91
PDS5A-209ENST00000512643 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
PDS5A-209ENST00000512643 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
PDS5A-209ENST00000512643 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
PDS5A-209ENST00000512643 MNX1P50219 401 aaPredicted RBP9.3□□□□□ -0.92
PDS5A-209ENST00000512643 BCL11BQ9C0K0 894 aaPredicted RBP9.3□□□□□ -0.92
PDS5A-209ENST00000512643 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
PDS5A-209ENST00000512643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
PDS5A-209ENST00000512643 CHRM1P11229 460 aaPredicted RBP9.29□□□□□ -0.92
PDS5A-209ENST00000512643 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
PDS5A-209ENST00000512643 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
PDS5A-209ENST00000512643 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
PDS5A-209ENST00000512643 RBM42Q9BTD8 480 aaKnown RBP9.28□□□□□ -0.92
PDS5A-209ENST00000512643 RYDENQ9NUL5 291 aaKnown RBP9.28□□□□□ -0.92
PDS5A-209ENST00000512643 SGIP1Q9BQI5 828 aa9.26□□□□□ -0.93
PDS5A-209ENST00000512643 PYGBP11216 843 aa9.25□□□□□ -0.93
PDS5A-209ENST00000512643 REM2Q8IYK8 340 aaPredicted RBP9.21□□□□□ -0.94
PDS5A-209ENST00000512643 P3H3Q8IVL6 736 aa9.19□□□□□ -0.94
PDS5A-209ENST00000512643 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
PDS5A-209ENST00000512643 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
PDS5A-209ENST00000512643 PITPNM1O00562 1244 aa9.12□□□□□ -0.95
PDS5A-209ENST00000512643 ZNF467Q7Z7K2 595 aaPredicted RBP9.11□□□□□ -0.95
PDS5A-209ENST00000512643 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
PDS5A-209ENST00000512643 GTF3C3Q9Y5Q9 886 aa9.11□□□□□ -0.95
PDS5A-209ENST00000512643 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
PDS5A-209ENST00000512643 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
PDS5A-209ENST00000512643 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
PDS5A-209ENST00000512643 PDAP1Q13442 181 aaKnown RBP9.08□□□□□ -0.96
PDS5A-209ENST00000512643 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
PDS5A-209ENST00000512643 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
PDS5A-209ENST00000512643 PCDHB8Q9UN66 801 aa9.04□□□□□ -0.96
PDS5A-209ENST00000512643 PCDHB13Q9Y5F0 798 aa9.04□□□□□ -0.96
PDS5A-209ENST00000512643 CHADLQ6NUI6 762 aa9.03□□□□□ -0.96
PDS5A-209ENST00000512643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDS5A-209ENST00000512643 MFRPQ9BY79 579 aa9.02□□□□□ -0.97
PDS5A-209ENST00000512643 PSEN1P49768 467 aa9□□□□□ -0.97
PDS5A-209ENST00000512643 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
PDS5A-209ENST00000512643 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
PDS5A-209ENST00000512643 ZNF579Q8NAF0 562 aaKnown RBP8.98□□□□□ -0.97
PDS5A-209ENST00000512643 CCDC61Q9Y6R9 512 aa8.96□□□□□ -0.98
PDS5A-209ENST00000512643 ARHGEF1Q92888 912 aaKnown RBP8.95□□□□□ -0.98
PDS5A-209ENST00000512643 PPP1R37O75864 691 aa8.93□□□□□ -0.98
PDS5A-209ENST00000512643 E2F4Q16254 413 aa8.92□□□□□ -0.98
PDS5A-209ENST00000512643 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
PDS5A-209ENST00000512643 NLRP6P59044 892 aa8.91□□□□□ -0.98
PDS5A-209ENST00000512643 EFCAB3Q8N7B9 438 aa8.91□□□□□ -0.98
PDS5A-209ENST00000512643 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
PDS5A-209ENST00000512643 CABP2Q9NPB3 220 aa8.91□□□□□ -0.98
PDS5A-209ENST00000512643 IFNL1Q8IU54 200 aa8.9□□□□□ -0.98
PDS5A-209ENST00000512643 SEMA3EO15041 775 aa8.89□□□□□ -0.99
PDS5A-209ENST00000512643 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
PDS5A-209ENST00000512643 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
PDS5A-209ENST00000512643 C14orf37Q86TY3 774 aa8.89□□□□□ -0.99
PDS5A-209ENST00000512643 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
PDS5A-209ENST00000512643 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
PDS5A-209ENST00000512643 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
PDS5A-209ENST00000512643 SOX12O15370 315 aa8.87□□□□□ -0.99
PDS5A-209ENST00000512643 MAP3K13O43283 966 aa8.85□□□□□ -0.99
PDS5A-209ENST00000512643 NEUROD2Q15784 382 aa8.85□□□□□ -0.99
PDS5A-209ENST00000512643 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
PDS5A-209ENST00000512643 KIF12Q96FN5 646 aa8.83□□□□□ -1
PDS5A-209ENST00000512643 ARXQ96QS3 562 aa8.83□□□□□ -1
PDS5A-209ENST00000512643 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
PDS5A-209ENST00000512643 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
PDS5A-209ENST00000512643 PDE4AP27815 886 aa8.79□□□□□ -1
PDS5A-209ENST00000512643 FXR2P51116 673 aaKnown RBP eCLIP8.79□□□□□ -1
PDS5A-209ENST00000512643 SMYD5Q6GMV2 418 aa8.79□□□□□ -1
PDS5A-209ENST00000512643 MFSD10Q14728 455 aa8.78□□□□□ -1
PDS5A-209ENST00000512643 DDX27Q96GQ7 796 aaKnown RBP8.78□□□□□ -1
PDS5A-209ENST00000512643 MS4A4AQ96JQ5 239 aa8.78□□□□□ -1
PDS5A-209ENST00000512643 ZMYND10O75800 440 aa8.77□□□□□ -1.01
PDS5A-209ENST00000512643 MYT1Q01538 1121 aa8.77□□□□□ -1.01
PDS5A-209ENST00000512643 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
PDS5A-209ENST00000512643 GOLGA2Q08379 1002 aa8.75□□□□□ -1.01
PDS5A-209ENST00000512643 ARIH1Q9Y4X5 557 aaPredicted RBP8.74□□□□□ -1.01
PDS5A-209ENST00000512643 ZRANB1Q9UGI0 708 aa8.72□□□□□ -1.01
PDS5A-209ENST00000512643 CAMK2BQ13554 666 aa8.71□□□□□ -1.02
PDS5A-209ENST00000512643 PHF12Q96QT6 1004 aa8.71□□□□□ -1.02
PDS5A-209ENST00000512643 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.02
PDS5A-209ENST00000512643 BARGINQ6ZT62 677 aa8.7□□□□□ -1.02
PDS5A-209ENST00000512643 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
PDS5A-209ENST00000512643 HOMEZQ8IX15 550 aa8.69□□□□□ -1.02
PDS5A-209ENST00000512643 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
PDS5A-209ENST00000512643 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
PDS5A-209ENST00000512643 CD44P16070 742 aaKnown RBP8.68□□□□□ -1.02
PDS5A-209ENST00000512643 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
PDS5A-209ENST00000512643 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
PDS5A-209ENST00000512643 MLLT3P42568 568 aaPredicted RBP8.67□□□□□ -1.02
PDS5A-209ENST00000512643 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
PDS5A-209ENST00000512643 PPP1R15BQ5SWA1 713 aa8.65□□□□□ -1.02
PDS5A-209ENST00000512643 AK7Q96M32 723 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms