RNA–Protein interactions for RNA: ENST00000512596.5

TRIM60-204, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM60, Length 1,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-204ENST00000512596 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
TRIM60-204ENST00000512596 RRP9O43818 475 aaKnown RBP12.95□□□□□ -0.34
TRIM60-204ENST00000512596 NACADO15069 1562 aa12.93□□□□□ -0.34
TRIM60-204ENST00000512596 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
TRIM60-204ENST00000512596 IPO4Q8TEX9 1081 aaKnown RBP12.91□□□□□ -0.34
TRIM60-204ENST00000512596 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
TRIM60-204ENST00000512596 PAXIP1Q6ZW49 1069 aaPredicted RBP12.91□□□□□ -0.34
TRIM60-204ENST00000512596 RTL5Q5HYW3 569 aaPredicted RBP12.9□□□□□ -0.34
TRIM60-204ENST00000512596 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRIM60-204ENST00000512596 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
TRIM60-204ENST00000512596 CDK11BP21127 795 aaKnown RBP12.87□□□□□ -0.35
TRIM60-204ENST00000512596 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
TRIM60-204ENST00000512596 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
TRIM60-204ENST00000512596 MIER1Q8N108 512 aa12.85□□□□□ -0.35
TRIM60-204ENST00000512596 WASHC2AQ641Q2 1341 aa12.81□□□□□ -0.36
TRIM60-204ENST00000512596 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
TRIM60-204ENST00000512596 TEX2Q8IWB9 1127 aa12.81□□□□□ -0.36
TRIM60-204ENST00000512596 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
TRIM60-204ENST00000512596 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
TRIM60-204ENST00000512596 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
TRIM60-204ENST00000512596 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
TRIM60-204ENST00000512596 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
TRIM60-204ENST00000512596 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
TRIM60-204ENST00000512596 NCLP19338 710 aaKnown RBP12.76□□□□□ -0.37
TRIM60-204ENST00000512596 BCANQ96GW7 911 aa12.76□□□□□ -0.37
TRIM60-204ENST00000512596 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
TRIM60-204ENST00000512596 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
TRIM60-204ENST00000512596 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
TRIM60-204ENST00000512596 HMGB1P09429 215 aaKnown RBP12.72□□□□□ -0.37
TRIM60-204ENST00000512596 CNGB1Q14028 1251 aaPredicted RBP12.72□□□□□ -0.37
TRIM60-204ENST00000512596 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
TRIM60-204ENST00000512596 FTSJ3Q8IY81 847 aaKnown RBP12.72□□□□□ -0.37
TRIM60-204ENST00000512596 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
TRIM60-204ENST00000512596 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
TRIM60-204ENST00000512596 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
TRIM60-204ENST00000512596 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
TRIM60-204ENST00000512596 ARID3AQ99856 593 aa12.68□□□□□ -0.38
TRIM60-204ENST00000512596 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
TRIM60-204ENST00000512596 ZFP91Q96JP5 570 aaPredicted RBP12.68□□□□□ -0.38
TRIM60-204ENST00000512596 PPM1GO15355 546 aaPredicted RBP12.67□□□□□ -0.38
TRIM60-204ENST00000512596 CHMP4BQ9H444 224 aaKnown RBP12.65□□□□□ -0.38
TRIM60-204ENST00000512596 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
TRIM60-204ENST00000512596 HSP90AA1P07900 732 aaKnown RBP12.65□□□□□ -0.38
TRIM60-204ENST00000512596 NBR1Q14596 966 aa12.65□□□□□ -0.38
TRIM60-204ENST00000512596 STAC3Q96MF2 364 aa12.65□□□□□ -0.38
TRIM60-204ENST00000512596 FKBP8Q14318 412 aa12.61□□□□□ -0.39
TRIM60-204ENST00000512596 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
TRIM60-204ENST00000512596 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
TRIM60-204ENST00000512596 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
TRIM60-204ENST00000512596 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.39
TRIM60-204ENST00000512596 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
TRIM60-204ENST00000512596 NEFMP07197 916 aa12.55□□□□□ -0.4
TRIM60-204ENST00000512596 PDCL3Q9H2J4 239 aa12.55□□□□□ -0.4
TRIM60-204ENST00000512596 KCNA4P22459 653 aa12.54□□□□□ -0.4
TRIM60-204ENST00000512596 TICAM2Q86XR7 235 aa12.54□□□□□ -0.4
TRIM60-204ENST00000512596 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
TRIM60-204ENST00000512596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRIM60-204ENST00000512596 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
TRIM60-204ENST00000512596 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.41
TRIM60-204ENST00000512596 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
TRIM60-204ENST00000512596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
TRIM60-204ENST00000512596 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
TRIM60-204ENST00000512596 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
TRIM60-204ENST00000512596 CLSTN1O94985 981 aa12.47□□□□□ -0.41
TRIM60-204ENST00000512596 PTMAP06454 111 aaKnown RBP12.46□□□□□ -0.41
TRIM60-204ENST00000512596 GSE1Q14687 1217 aa12.46□□□□□ -0.41
TRIM60-204ENST00000512596 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
TRIM60-204ENST00000512596 RGS3P49796 1198 aa12.46□□□□□ -0.42
TRIM60-204ENST00000512596 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.42
TRIM60-204ENST00000512596 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.42
TRIM60-204ENST00000512596 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.46□□□□□ -0.42
TRIM60-204ENST00000512596 CNPY4Q8N129 248 aa12.45□□□□□ -0.42
TRIM60-204ENST00000512596 CLGNO14967 610 aa12.44□□□□□ -0.42
TRIM60-204ENST00000512596 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
TRIM60-204ENST00000512596 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
TRIM60-204ENST00000512596 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
TRIM60-204ENST00000512596 UTP14CQ5TAP6 766 aaKnown RBP12.43□□□□□ -0.42
TRIM60-204ENST00000512596 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
TRIM60-204ENST00000512596 MMP14P50281 582 aa12.42□□□□□ -0.42
TRIM60-204ENST00000512596 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
TRIM60-204ENST00000512596 TPM2P07951 284 aa12.4□□□□□ -0.42
TRIM60-204ENST00000512596 MCCP23508 829 aa12.4□□□□□ -0.42
TRIM60-204ENST00000512596 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
TRIM60-204ENST00000512596 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
TRIM60-204ENST00000512596 AXDND1Q5T1B0 1012 aaPredicted RBP12.39□□□□□ -0.43
TRIM60-204ENST00000512596 PTMSP20962 102 aa12.38□□□□□ -0.43
TRIM60-204ENST00000512596 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
TRIM60-204ENST00000512596 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM60-204ENST00000512596 TMEM51Q9NW97 253 aa12.37□□□□□ -0.43
TRIM60-204ENST00000512596 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
TRIM60-204ENST00000512596 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
TRIM60-204ENST00000512596 PNNQ9H307 717 aaKnown RBP12.35□□□□□ -0.43
TRIM60-204ENST00000512596 CLCN1P35523 988 aa12.34□□□□□ -0.43
TRIM60-204ENST00000512596 ITGAEP38570 1179 aa12.34□□□□□ -0.43
TRIM60-204ENST00000512596 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
TRIM60-204ENST00000512596 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
TRIM60-204ENST00000512596 PLCD4Q9BRC7 762 aa12.34□□□□□ -0.43
TRIM60-204ENST00000512596 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
TRIM60-204ENST00000512596 FAM193AP78312 1265 aa12.31□□□□□ -0.44
TRIM60-204ENST00000512596 PHF14O94880 888 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms