RNA–Protein interactions for RNA: ENST00000512547.1

LINC02500-201, Transcript of long intergenic non-protein coding RNA 2500, humanhuman

TSL 3 BASIC

Gene LINC02500, Length 493 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02500-201ENST00000512547 NUBP1P53384 320 aa13.56□□□□□ -0.24
LINC02500-201ENST00000512547 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
LINC02500-201ENST00000512547 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
LINC02500-201ENST00000512547 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
LINC02500-201ENST00000512547 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
LINC02500-201ENST00000512547 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
LINC02500-201ENST00000512547 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
LINC02500-201ENST00000512547 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
LINC02500-201ENST00000512547 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
LINC02500-201ENST00000512547 SPOCK2Q92563 424 aa13.41□□□□□ -0.26
LINC02500-201ENST00000512547 GSE1Q14687 1217 aa13.4□□□□□ -0.26
LINC02500-201ENST00000512547 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
LINC02500-201ENST00000512547 MAP3K13O43283 966 aa13.38□□□□□ -0.27
LINC02500-201ENST00000512547 LHX8Q68G74 356 aa13.37□□□□□ -0.27
LINC02500-201ENST00000512547 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
LINC02500-201ENST00000512547 ASTLQ6HA08 431 aaPredicted RBP13.29□□□□□ -0.28
LINC02500-201ENST00000512547 PYGBP11216 843 aa13.27□□□□□ -0.29
LINC02500-201ENST00000512547 TIE1P35590 1138 aa13.26□□□□□ -0.29
LINC02500-201ENST00000512547 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
LINC02500-201ENST00000512547 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
LINC02500-201ENST00000512547 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
LINC02500-201ENST00000512547 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
LINC02500-201ENST00000512547 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
LINC02500-201ENST00000512547 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
LINC02500-201ENST00000512547 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
LINC02500-201ENST00000512547 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
LINC02500-201ENST00000512547 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
LINC02500-201ENST00000512547 C7P10643 843 aa13.17□□□□□ -0.3
LINC02500-201ENST00000512547 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
LINC02500-201ENST00000512547 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
LINC02500-201ENST00000512547 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
LINC02500-201ENST00000512547 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
LINC02500-201ENST00000512547 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
LINC02500-201ENST00000512547 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
LINC02500-201ENST00000512547 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
LINC02500-201ENST00000512547 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
LINC02500-201ENST00000512547 IER5LQ5T953 404 aa13.06□□□□□ -0.32
LINC02500-201ENST00000512547 OTUD5Q96G74 571 aa13.02□□□□□ -0.33
LINC02500-201ENST00000512547 SEC24BO95487 1268 aa13.01□□□□□ -0.33
LINC02500-201ENST00000512547 PSEN1P49768 467 aa13□□□□□ -0.33
LINC02500-201ENST00000512547 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
LINC02500-201ENST00000512547 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
LINC02500-201ENST00000512547 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
LINC02500-201ENST00000512547 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
LINC02500-201ENST00000512547 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
LINC02500-201ENST00000512547 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
LINC02500-201ENST00000512547 PLCG2P16885 1265 aa12.91□□□□□ -0.34
LINC02500-201ENST00000512547 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
LINC02500-201ENST00000512547 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
LINC02500-201ENST00000512547 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
LINC02500-201ENST00000512547 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
LINC02500-201ENST00000512547 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
LINC02500-201ENST00000512547 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
LINC02500-201ENST00000512547 ECM2O94769 699 aaPredicted RBP12.86□□□□□ -0.35
LINC02500-201ENST00000512547 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
LINC02500-201ENST00000512547 RNF25Q96BH1 459 aaPredicted RBP12.84□□□□□ -0.35
LINC02500-201ENST00000512547 PKD2Q13563 968 aa12.82□□□□□ -0.36
LINC02500-201ENST00000512547 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
LINC02500-201ENST00000512547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC02500-201ENST00000512547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
LINC02500-201ENST00000512547 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
LINC02500-201ENST00000512547 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
LINC02500-201ENST00000512547 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
LINC02500-201ENST00000512547 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
LINC02500-201ENST00000512547 RGL2O15211 777 aa12.69□□□□□ -0.38
LINC02500-201ENST00000512547 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
LINC02500-201ENST00000512547 SOX12O15370 315 aa12.68□□□□□ -0.38
LINC02500-201ENST00000512547 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
LINC02500-201ENST00000512547 STK25O00506 426 aa12.66□□□□□ -0.38
LINC02500-201ENST00000512547 G3V3G9 751 aa12.65□□□□□ -0.38
LINC02500-201ENST00000512547 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
LINC02500-201ENST00000512547 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
LINC02500-201ENST00000512547 LCE2DQ5TA82 110 aaPredicted RBP12.62□□□□□ -0.39
LINC02500-201ENST00000512547 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
LINC02500-201ENST00000512547 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
LINC02500-201ENST00000512547 POTEMA6NI47 508 aa12.58□□□□□ -0.4
LINC02500-201ENST00000512547 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
LINC02500-201ENST00000512547 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
LINC02500-201ENST00000512547 NLRP6P59044 892 aa12.57□□□□□ -0.4
LINC02500-201ENST00000512547 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
LINC02500-201ENST00000512547 FAM163AQ96GL9 167 aaPredicted RBP12.55□□□□□ -0.4
LINC02500-201ENST00000512547 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
LINC02500-201ENST00000512547 SNPHO15079 494 aa12.5□□□□□ -0.41
LINC02500-201ENST00000512547 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
LINC02500-201ENST00000512547 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
LINC02500-201ENST00000512547 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
LINC02500-201ENST00000512547 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
LINC02500-201ENST00000512547 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
LINC02500-201ENST00000512547 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
LINC02500-201ENST00000512547 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
LINC02500-201ENST00000512547 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
LINC02500-201ENST00000512547 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
LINC02500-201ENST00000512547 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
LINC02500-201ENST00000512547 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
LINC02500-201ENST00000512547 ST18O60284 1047 aa12.35□□□□□ -0.43
LINC02500-201ENST00000512547 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
LINC02500-201ENST00000512547 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
LINC02500-201ENST00000512547 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
LINC02500-201ENST00000512547 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
LINC02500-201ENST00000512547 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms