RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 ASTLQ6HA08 431 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-204ENST00000512482 PELP1Q8IZL8 1130 aaKnown RBP9.04□□□□□ -0.96
COL6A5-204ENST00000512482 PLCD3Q8N3E9 789 aa9.04□□□□□ -0.96
COL6A5-204ENST00000512482 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
COL6A5-204ENST00000512482 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-204ENST00000512482 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-204ENST00000512482 RASEFQ8IZ41 740 aa9.01□□□□□ -0.97
COL6A5-204ENST00000512482 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
COL6A5-204ENST00000512482 POTEB2H3BUK9 544 aa8.99□□□□□ -0.97
COL6A5-204ENST00000512482 C7P10643 843 aa8.99□□□□□ -0.97
COL6A5-204ENST00000512482 OTUD5Q96G74 571 aa8.98□□□□□ -0.97
COL6A5-204ENST00000512482 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
COL6A5-204ENST00000512482 FBXO3Q9UK99 471 aa8.96□□□□□ -0.97
COL6A5-204ENST00000512482 MAP3K13O43283 966 aa8.96□□□□□ -0.98
COL6A5-204ENST00000512482 NUBP1P53384 320 aa8.95□□□□□ -0.98
COL6A5-204ENST00000512482 TIE1P35590 1138 aa8.94□□□□□ -0.98
COL6A5-204ENST00000512482 ATN1P54259 1190 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-204ENST00000512482 SGIP1Q9BQI5 828 aa8.94□□□□□ -0.98
COL6A5-204ENST00000512482 BMP2KQ9NSY1 1161 aaPredicted RBP8.93□□□□□ -0.98
COL6A5-204ENST00000512482 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
COL6A5-204ENST00000512482 MAMSTRQ6ZN01 415 aa8.89□□□□□ -0.99
COL6A5-204ENST00000512482 FAM212AQ96EL1 285 aa8.89□□□□□ -0.99
COL6A5-204ENST00000512482 PCDHB13Q9Y5F0 798 aa8.88□□□□□ -0.99
COL6A5-204ENST00000512482 POTEJP0CG39 1038 aa8.86□□□□□ -0.99
COL6A5-204ENST00000512482 TTLL13PA6NNM8 815 aa8.86□□□□□ -0.99
COL6A5-204ENST00000512482 POTEFA5A3E0 1075 aa8.84□□□□□ -1
COL6A5-204ENST00000512482 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
COL6A5-204ENST00000512482 IER5LQ5T953 404 aa8.81□□□□□ -1
COL6A5-204ENST00000512482 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
COL6A5-204ENST00000512482 IFNL1Q8IU54 200 aa8.81□□□□□ -1
COL6A5-204ENST00000512482 VASPP50552 380 aaPredicted RBP8.81□□□□□ -1
COL6A5-204ENST00000512482 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
COL6A5-204ENST00000512482 SEC24BO95487 1268 aa8.78□□□□□ -1
COL6A5-204ENST00000512482 COLQQ9Y215 455 aaPredicted RBP8.77□□□□□ -1.01
COL6A5-204ENST00000512482 TMEM106CQ9BVX2 250 aa8.76□□□□□ -1.01
COL6A5-204ENST00000512482 POTEMA6NI47 508 aa8.74□□□□□ -1.01
COL6A5-204ENST00000512482 KLHL34Q8N239 644 aa8.74□□□□□ -1.01
COL6A5-204ENST00000512482 PYGBP11216 843 aa8.73□□□□□ -1.01
COL6A5-204ENST00000512482 GSE1Q14687 1217 aa8.73□□□□□ -1.01
COL6A5-204ENST00000512482 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
COL6A5-204ENST00000512482 PLCG2P16885 1265 aa8.69□□□□□ -1.02
COL6A5-204ENST00000512482 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-204ENST00000512482 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-204ENST00000512482 PCDH10Q9P2E7 1040 aa8.68□□□□□ -1.02
COL6A5-204ENST00000512482 PCDHB8Q9UN66 801 aa8.68□□□□□ -1.02
COL6A5-204ENST00000512482 CHRM1P11229 460 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-204ENST00000512482 IRX5P78411 483 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-204ENST00000512482 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-204ENST00000512482 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-204ENST00000512482 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
COL6A5-204ENST00000512482 SLAIN1Q8ND83 568 aa8.61□□□□□ -1.03
COL6A5-204ENST00000512482 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
COL6A5-204ENST00000512482 GOLGA2Q08379 1002 aa8.57□□□□□ -1.04
COL6A5-204ENST00000512482 PSEN1P49768 467 aa8.56□□□□□ -1.04
COL6A5-204ENST00000512482 MKRN3Q13064 507 aaKnown RBP8.56□□□□□ -1.04
COL6A5-204ENST00000512482 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
COL6A5-204ENST00000512482 CIZ1Q9ULV3 898 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-204ENST00000512482 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
COL6A5-204ENST00000512482 PDCD7Q8N8D1 485 aaKnown RBP8.53□□□□□ -1.04
COL6A5-204ENST00000512482 L3MBTL3Q96JM7 780 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-204ENST00000512482 SNPHO15079 494 aa8.51□□□□□ -1.05
COL6A5-204ENST00000512482 ST18O60284 1047 aa8.51□□□□□ -1.05
COL6A5-204ENST00000512482 TRIM41Q8WV44 630 aa8.5□□□□□ -1.05
COL6A5-204ENST00000512482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL6A5-204ENST00000512482 ILDR1Q86SU0 546 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-204ENST00000512482 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.05
COL6A5-204ENST00000512482 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.05
COL6A5-204ENST00000512482 TMEM121BQ9BXQ6 578 aaPredicted RBP8.46□□□□□ -1.05
COL6A5-204ENST00000512482 CABP2Q9NPB3 220 aa8.45□□□□□ -1.06
COL6A5-204ENST00000512482 G3V3G9 751 aa8.39□□□□□ -1.07
COL6A5-204ENST00000512482 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
COL6A5-204ENST00000512482 BOLA1Q9Y3E2 137 aa8.38□□□□□ -1.07
COL6A5-204ENST00000512482 PKD2Q13563 968 aa8.36□□□□□ -1.07
COL6A5-204ENST00000512482 ECM2O94769 699 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-204ENST00000512482 AMER1Q5JTC6 1135 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-204ENST00000512482 EFCAB3Q8N7B9 438 aa8.34□□□□□ -1.07
COL6A5-204ENST00000512482 RIOK3O14730 519 aaKnown RBP8.33□□□□□ -1.08
COL6A5-204ENST00000512482 MARVELD3Q96A59 401 aa8.33□□□□□ -1.08
COL6A5-204ENST00000512482 VGFO15240 615 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-204ENST00000512482 SOX12O15370 315 aa8.31□□□□□ -1.08
COL6A5-204ENST00000512482 EMP3P54852 163 aa8.3□□□□□ -1.08
COL6A5-204ENST00000512482 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
COL6A5-204ENST00000512482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-204ENST00000512482 ZFP91Q96JP5 570 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-204ENST00000512482 RTN4Q9NQC3 1192 aaKnown RBP8.27□□□□□ -1.08
COL6A5-204ENST00000512482 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
COL6A5-204ENST00000512482 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.09
COL6A5-204ENST00000512482 SPNS2Q8IVW8 549 aa8.26□□□□□ -1.09
COL6A5-204ENST00000512482 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
COL6A5-204ENST00000512482 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
COL6A5-204ENST00000512482 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
COL6A5-204ENST00000512482 MICALL2Q8IY33 904 aa8.25□□□□□ -1.09
COL6A5-204ENST00000512482 RGL2O15211 777 aa8.24□□□□□ -1.09
COL6A5-204ENST00000512482 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
COL6A5-204ENST00000512482 MMRN1Q13201 1228 aa8.23□□□□□ -1.09
COL6A5-204ENST00000512482 ZNF710Q8N1W2 664 aa8.23□□□□□ -1.09
COL6A5-204ENST00000512482 POTEB3A0JP26 581 aa8.22□□□□□ -1.09
COL6A5-204ENST00000512482 POTEBQ6S5H4 581 aa8.22□□□□□ -1.09
COL6A5-204ENST00000512482 MS4A4AQ96JQ5 239 aa8.22□□□□□ -1.09
COL6A5-204ENST00000512482 PHF8Q9UPP1 1060 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms