RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
PDE4D-220ENST00000512069 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
PDE4D-220ENST00000512069 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
PDE4D-220ENST00000512069 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
PDE4D-220ENST00000512069 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
PDE4D-220ENST00000512069 CLCN6P51797 869 aa13.51□□□□□ -0.25
PDE4D-220ENST00000512069 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
PDE4D-220ENST00000512069 MAP3K13O43283 966 aa13.48□□□□□ -0.25
PDE4D-220ENST00000512069 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
PDE4D-220ENST00000512069 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
PDE4D-220ENST00000512069 PYGBP11216 843 aa13.46□□□□□ -0.25
PDE4D-220ENST00000512069 GSE1Q14687 1217 aa13.46□□□□□ -0.25
PDE4D-220ENST00000512069 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
PDE4D-220ENST00000512069 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
PDE4D-220ENST00000512069 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
PDE4D-220ENST00000512069 TRPC6Q9Y210 931 aa13.36□□□□□ -0.27
PDE4D-220ENST00000512069 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
PDE4D-220ENST00000512069 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
PDE4D-220ENST00000512069 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
PDE4D-220ENST00000512069 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
PDE4D-220ENST00000512069 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
PDE4D-220ENST00000512069 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
PDE4D-220ENST00000512069 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
PDE4D-220ENST00000512069 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
PDE4D-220ENST00000512069 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
PDE4D-220ENST00000512069 PKD2Q13563 968 aa13.23□□□□□ -0.29
PDE4D-220ENST00000512069 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
PDE4D-220ENST00000512069 TIE1P35590 1138 aa13.21□□□□□ -0.29
PDE4D-220ENST00000512069 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
PDE4D-220ENST00000512069 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
PDE4D-220ENST00000512069 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
PDE4D-220ENST00000512069 TMEM106CQ9BVX2 250 aa13.18□□□□□ -0.3
PDE4D-220ENST00000512069 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
PDE4D-220ENST00000512069 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
PDE4D-220ENST00000512069 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
PDE4D-220ENST00000512069 PSEN1P49768 467 aa13.11□□□□□ -0.31
PDE4D-220ENST00000512069 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
PDE4D-220ENST00000512069 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
PDE4D-220ENST00000512069 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
PDE4D-220ENST00000512069 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
PDE4D-220ENST00000512069 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
PDE4D-220ENST00000512069 C7P10643 843 aa13.06□□□□□ -0.32
PDE4D-220ENST00000512069 RGL2O15211 777 aa13.04□□□□□ -0.32
PDE4D-220ENST00000512069 LHX8Q68G74 356 aa13.03□□□□□ -0.32
PDE4D-220ENST00000512069 POTEFA5A3E0 1075 aa13□□□□□ -0.33
PDE4D-220ENST00000512069 POTEB2H3BUK9 544 aa13□□□□□ -0.33
PDE4D-220ENST00000512069 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
PDE4D-220ENST00000512069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-220ENST00000512069 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-220ENST00000512069 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
PDE4D-220ENST00000512069 SEC24BO95487 1268 aa12.96□□□□□ -0.33
PDE4D-220ENST00000512069 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
PDE4D-220ENST00000512069 IER5LQ5T953 404 aa12.96□□□□□ -0.33
PDE4D-220ENST00000512069 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
PDE4D-220ENST00000512069 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
PDE4D-220ENST00000512069 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
PDE4D-220ENST00000512069 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
PDE4D-220ENST00000512069 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
PDE4D-220ENST00000512069 PLCG2P16885 1265 aa12.88□□□□□ -0.35
PDE4D-220ENST00000512069 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
PDE4D-220ENST00000512069 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
PDE4D-220ENST00000512069 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
PDE4D-220ENST00000512069 STK25O00506 426 aa12.86□□□□□ -0.35
PDE4D-220ENST00000512069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDE4D-220ENST00000512069 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
PDE4D-220ENST00000512069 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
PDE4D-220ENST00000512069 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
PDE4D-220ENST00000512069 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
PDE4D-220ENST00000512069 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
PDE4D-220ENST00000512069 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
PDE4D-220ENST00000512069 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
PDE4D-220ENST00000512069 HS6ST3Q8IZP7 471 aa12.75□□□□□ -0.37
PDE4D-220ENST00000512069 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
PDE4D-220ENST00000512069 SOX12O15370 315 aa12.73□□□□□ -0.37
PDE4D-220ENST00000512069 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
PDE4D-220ENST00000512069 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
PDE4D-220ENST00000512069 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
PDE4D-220ENST00000512069 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
PDE4D-220ENST00000512069 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
PDE4D-220ENST00000512069 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
PDE4D-220ENST00000512069 NLRP6P59044 892 aa12.65□□□□□ -0.38
PDE4D-220ENST00000512069 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
PDE4D-220ENST00000512069 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
PDE4D-220ENST00000512069 G3V3G9 751 aa12.59□□□□□ -0.39
PDE4D-220ENST00000512069 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
PDE4D-220ENST00000512069 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
PDE4D-220ENST00000512069 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-220ENST00000512069 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
PDE4D-220ENST00000512069 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-220ENST00000512069 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
PDE4D-220ENST00000512069 TMEM121BQ9BXQ6 578 aaPredicted RBP12.54□□□□□ -0.4
PDE4D-220ENST00000512069 PPP1R37O75864 691 aa12.53□□□□□ -0.4
PDE4D-220ENST00000512069 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
PDE4D-220ENST00000512069 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
PDE4D-220ENST00000512069 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
PDE4D-220ENST00000512069 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
PDE4D-220ENST00000512069 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
PDE4D-220ENST00000512069 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
PDE4D-220ENST00000512069 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
PDE4D-220ENST00000512069 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms