RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 PAK3O75914 559 aaPredicted RBP7.36□□□□□ -1.23
GYPA-208ENST00000512064 SLC39A7Q92504 469 aa7.33□□□□□ -1.24
GYPA-208ENST00000512064 FAM163AQ96GL9 167 aaPredicted RBP7.33□□□□□ -1.24
GYPA-208ENST00000512064 C7P10643 843 aa7.32□□□□□ -1.24
GYPA-208ENST00000512064 METRNQ9UJH8 293 aa7.32□□□□□ -1.24
GYPA-208ENST00000512064 LCE2DQ5TA82 110 aaPredicted RBP7.31□□□□□ -1.24
GYPA-208ENST00000512064 SCUBE2Q9NQ36 999 aa7.31□□□□□ -1.24
GYPA-208ENST00000512064 ASTLQ6HA08 431 aaPredicted RBP7.28□□□□□ -1.24
GYPA-208ENST00000512064 STAG3Q9UJ98 1225 aa7.28□□□□□ -1.24
GYPA-208ENST00000512064 FBXO3Q9UK99 471 aa7.27□□□□□ -1.25
GYPA-208ENST00000512064 POTEJP0CG39 1038 aa7.25□□□□□ -1.25
GYPA-208ENST00000512064 CDAN1Q8IWY9 1227 aa7.25□□□□□ -1.25
GYPA-208ENST00000512064 PROM2Q8N271 834 aa7.25□□□□□ -1.25
GYPA-208ENST00000512064 PHF12Q96QT6 1004 aa7.25□□□□□ -1.25
GYPA-208ENST00000512064 CREBZFQ9NS37 354 aa7.25□□□□□ -1.25
GYPA-208ENST00000512064 ATMINO43313 823 aaPredicted RBP7.22□□□□□ -1.25
GYPA-208ENST00000512064 NPM1P06748 294 aaKnown RBP eCLIP7.2□□□□□ -1.26
GYPA-208ENST00000512064 MS4A3Q96HJ5 214 aa7.16□□□□□ -1.26
GYPA-208ENST00000512064 MMRN1Q13201 1228 aa7.12□□□□□ -1.27
GYPA-208ENST00000512064 MIER1Q8N108 512 aa7.12□□□□□ -1.27
GYPA-208ENST00000512064 VASPP50552 380 aaPredicted RBP7.11□□□□□ -1.27
GYPA-208ENST00000512064 PLEKHG5O94827 1062 aa7.1□□□□□ -1.27
GYPA-208ENST00000512064 ATN1P54259 1190 aaPredicted RBP7.1□□□□□ -1.27
GYPA-208ENST00000512064 PLCD3Q8N3E9 789 aa7.09□□□□□ -1.27
GYPA-208ENST00000512064 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
GYPA-208ENST00000512064 POTEFA5A3E0 1075 aa7.06□□□□□ -1.28
GYPA-208ENST00000512064 MNX1P50219 401 aaPredicted RBP7.05□□□□□ -1.28
GYPA-208ENST00000512064 ST18O60284 1047 aa7.03□□□□□ -1.28
GYPA-208ENST00000512064 SEC24BO95487 1268 aa7.03□□□□□ -1.28
GYPA-208ENST00000512064 TIE1P35590 1138 aa7.02□□□□□ -1.29
GYPA-208ENST00000512064 ERICH6Q7L0X2 663 aa7.02□□□□□ -1.29
GYPA-208ENST00000512064 BMP2KQ9NSY1 1161 aaPredicted RBP7.01□□□□□ -1.29
GYPA-208ENST00000512064 IFNLR1Q8IU57 520 aaPredicted RBP7□□□□□ -1.29
GYPA-208ENST00000512064 TMEM121BQ9BXQ6 578 aaPredicted RBP7□□□□□ -1.29
GYPA-208ENST00000512064 PLCB2Q00722 1185 aa6.99□□□□□ -1.29
GYPA-208ENST00000512064 SLAIN1Q8ND83 568 aa6.99□□□□□ -1.29
GYPA-208ENST00000512064 ZBTB47Q9UFB7 747 aaPredicted RBP6.99□□□□□ -1.29
GYPA-208ENST00000512064 IER5LQ5T953 404 aa6.97□□□□□ -1.29
GYPA-208ENST00000512064 KLHL34Q8N239 644 aa6.97□□□□□ -1.29
GYPA-208ENST00000512064 KIF12Q96FN5 646 aa6.97□□□□□ -1.29
GYPA-208ENST00000512064 TSPYL2Q9H2G4 693 aaPredicted RBP6.97□□□□□ -1.29
GYPA-208ENST00000512064 CCDC61Q9Y6R9 512 aa6.97□□□□□ -1.29
GYPA-208ENST00000512064 COLQQ9Y215 455 aaPredicted RBP6.95□□□□□ -1.3
GYPA-208ENST00000512064 SNPHO15079 494 aa6.94□□□□□ -1.3
GYPA-208ENST00000512064 PKD2Q13563 968 aa6.93□□□□□ -1.3
GYPA-208ENST00000512064 RASEFQ8IZ41 740 aa6.93□□□□□ -1.3
GYPA-208ENST00000512064 TTLL13PA6NNM8 815 aa6.91□□□□□ -1.3
GYPA-208ENST00000512064 NUBP1P53384 320 aa6.91□□□□□ -1.3
GYPA-208ENST00000512064 TRPC6Q9Y210 931 aa6.9□□□□□ -1.3
GYPA-208ENST00000512064 SPOCK2Q92563 424 aa6.89□□□□□ -1.31
GYPA-208ENST00000512064 MAP3K13O43283 966 aa6.88□□□□□ -1.31
GYPA-208ENST00000512064 DCAF8Q5TAQ9 597 aa6.88□□□□□ -1.31
GYPA-208ENST00000512064 FAM212AQ96EL1 285 aa6.88□□□□□ -1.31
GYPA-208ENST00000512064 TRIM35Q9UPQ4 493 aa6.88□□□□□ -1.31
GYPA-208ENST00000512064 SGIP1Q9BQI5 828 aa6.85□□□□□ -1.31
GYPA-208ENST00000512064 PLCG2P16885 1265 aa6.84□□□□□ -1.31
GYPA-208ENST00000512064 MARVELD3Q96A59 401 aa6.82□□□□□ -1.32
GYPA-208ENST00000512064 PYGBP11216 843 aa6.81□□□□□ -1.32
GYPA-208ENST00000512064 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
GYPA-208ENST00000512064 BBXQ8WY36 941 aaPredicted RBP6.81□□□□□ -1.32
GYPA-208ENST00000512064 CIZ1Q9ULV3 898 aaPredicted RBP6.81□□□□□ -1.32
GYPA-208ENST00000512064 DCAF8L2P0C7V8 631 aa6.8□□□□□ -1.32
GYPA-208ENST00000512064 GSE1Q14687 1217 aa6.8□□□□□ -1.32
GYPA-208ENST00000512064 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.8□□□□□ -1.32
GYPA-208ENST00000512064 ECM2O94769 699 aaPredicted RBP6.79□□□□□ -1.32
GYPA-208ENST00000512064 EMP3P54852 163 aa6.79□□□□□ -1.32
GYPA-208ENST00000512064 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.79□□□□□ -1.32
GYPA-208ENST00000512064 PCDHB13Q9Y5F0 798 aa6.79□□□□□ -1.32
GYPA-208ENST00000512064 HAP1P54257 671 aaPredicted RBP6.78□□□□□ -1.32
GYPA-208ENST00000512064 TRIM41Q8WV44 630 aa6.78□□□□□ -1.32
GYPA-208ENST00000512064 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
GYPA-208ENST00000512064 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
GYPA-208ENST00000512064 BCANQ96GW7 911 aa6.76□□□□□ -1.33
GYPA-208ENST00000512064 DAXXQ9UER7 740 aaPredicted RBP6.76□□□□□ -1.33
GYPA-208ENST00000512064 IRX5P78411 483 aaPredicted RBP6.75□□□□□ -1.33
GYPA-208ENST00000512064 HS3ST6Q96QI5 342 aa6.75□□□□□ -1.33
GYPA-208ENST00000512064 IFNL1Q8IU54 200 aa6.74□□□□□ -1.33
GYPA-208ENST00000512064 OCEL1Q9H607 264 aa6.74□□□□□ -1.33
GYPA-208ENST00000512064 TMEM106CQ9BVX2 250 aa6.72□□□□□ -1.33
GYPA-208ENST00000512064 PCDHB8Q9UN66 801 aa6.72□□□□□ -1.33
GYPA-208ENST00000512064 FAM205CA6NFA0 338 aa6.71□□□□□ -1.34
GYPA-208ENST00000512064 RGL2O15211 777 aa6.71□□□□□ -1.34
GYPA-208ENST00000512064 DNAJC5Q9H3Z4 198 aa6.7□□□□□ -1.34
GYPA-208ENST00000512064 CHRM1P11229 460 aaPredicted RBP6.69□□□□□ -1.34
GYPA-208ENST00000512064 RNF166Q96A37 237 aaPredicted RBP6.69□□□□□ -1.34
GYPA-208ENST00000512064 ZNF467Q7Z7K2 595 aaPredicted RBP6.68□□□□□ -1.34
GYPA-208ENST00000512064 SPRYD3Q8NCJ5 442 aa6.67□□□□□ -1.34
GYPA-208ENST00000512064 POTEB3A0JP26 581 aa6.66□□□□□ -1.34
GYPA-208ENST00000512064 POTEBQ6S5H4 581 aa6.66□□□□□ -1.34
GYPA-208ENST00000512064 C3orf67Q6ZVT6 689 aa6.66□□□□□ -1.34
GYPA-208ENST00000512064 PAXIP1Q6ZW49 1069 aaPredicted RBP6.66□□□□□ -1.34
GYPA-208ENST00000512064 HS6ST3Q8IZP7 471 aa6.66□□□□□ -1.34
GYPA-208ENST00000512064 TAOK2Q9UL54 1235 aa6.64□□□□□ -1.35
GYPA-208ENST00000512064 L3MBTL3Q96JM7 780 aaPredicted RBP6.63□□□□□ -1.35
GYPA-208ENST00000512064 KDM2AQ9Y2K7 1162 aa6.63□□□□□ -1.35
GYPA-208ENST00000512064 PSEN1P49768 467 aa6.62□□□□□ -1.35
GYPA-208ENST00000512064 CHGAP10645 457 aaKnown RBP6.61□□□□□ -1.35
GYPA-208ENST00000512064 CFAP44Q96MT7 982 aa6.61□□□□□ -1.35
GYPA-208ENST00000512064 MYT1LQ9UL68 1186 aa6.61□□□□□ -1.35
GYPA-208ENST00000512064 GOLGA2Q08379 1002 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms