RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-218ENST00000511978 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
MATR3-218ENST00000511978 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
MATR3-218ENST00000511978 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
MATR3-218ENST00000511978 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
MATR3-218ENST00000511978 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
MATR3-218ENST00000511978 PYGBP11216 843 aa13.68□□□□□ -0.22
MATR3-218ENST00000511978 POTEHQ6S545 545 aa13.66□□□□□ -0.22
MATR3-218ENST00000511978 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
MATR3-218ENST00000511978 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
MATR3-218ENST00000511978 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
MATR3-218ENST00000511978 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
MATR3-218ENST00000511978 HAX1O00165 279 aa13.56□□□□□ -0.24
MATR3-218ENST00000511978 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
MATR3-218ENST00000511978 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
MATR3-218ENST00000511978 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
MATR3-218ENST00000511978 MAP3K13O43283 966 aa13.52□□□□□ -0.25
MATR3-218ENST00000511978 EVX2Q03828 476 aa13.52□□□□□ -0.25
MATR3-218ENST00000511978 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
MATR3-218ENST00000511978 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
MATR3-218ENST00000511978 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
MATR3-218ENST00000511978 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
MATR3-218ENST00000511978 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
MATR3-218ENST00000511978 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
MATR3-218ENST00000511978 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
MATR3-218ENST00000511978 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
MATR3-218ENST00000511978 HS6ST3Q8IZP7 471 aa13.44□□□□□ -0.26
MATR3-218ENST00000511978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
MATR3-218ENST00000511978 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
MATR3-218ENST00000511978 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
MATR3-218ENST00000511978 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
MATR3-218ENST00000511978 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
MATR3-218ENST00000511978 STK25O00506 426 aa13.37□□□□□ -0.27
MATR3-218ENST00000511978 PSEN1P49768 467 aa13.37□□□□□ -0.27
MATR3-218ENST00000511978 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
MATR3-218ENST00000511978 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
MATR3-218ENST00000511978 CLCN6P51797 869 aa13.34□□□□□ -0.27
MATR3-218ENST00000511978 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
MATR3-218ENST00000511978 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
MATR3-218ENST00000511978 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
MATR3-218ENST00000511978 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
MATR3-218ENST00000511978 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
MATR3-218ENST00000511978 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
MATR3-218ENST00000511978 GABBR2O75899 941 aa13.24□□□□□ -0.29
MATR3-218ENST00000511978 TIE1P35590 1138 aa13.24□□□□□ -0.29
MATR3-218ENST00000511978 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
MATR3-218ENST00000511978 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
MATR3-218ENST00000511978 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
MATR3-218ENST00000511978 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
MATR3-218ENST00000511978 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
MATR3-218ENST00000511978 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
MATR3-218ENST00000511978 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
MATR3-218ENST00000511978 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
MATR3-218ENST00000511978 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
MATR3-218ENST00000511978 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
MATR3-218ENST00000511978 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
MATR3-218ENST00000511978 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
MATR3-218ENST00000511978 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
MATR3-218ENST00000511978 MFRPQ9BY79 579 aa13.11□□□□□ -0.31
MATR3-218ENST00000511978 SOX12O15370 315 aa13.09□□□□□ -0.31
MATR3-218ENST00000511978 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
MATR3-218ENST00000511978 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
MATR3-218ENST00000511978 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
MATR3-218ENST00000511978 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
MATR3-218ENST00000511978 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
MATR3-218ENST00000511978 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
MATR3-218ENST00000511978 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
MATR3-218ENST00000511978 DCBLD2Q96PD2 775 aa13.04□□□□□ -0.32
MATR3-218ENST00000511978 NLRP6P59044 892 aa13.03□□□□□ -0.32
MATR3-218ENST00000511978 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
MATR3-218ENST00000511978 POTEIP0CG38 1075 aa13□□□□□ -0.33
MATR3-218ENST00000511978 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
MATR3-218ENST00000511978 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
MATR3-218ENST00000511978 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
MATR3-218ENST00000511978 IER5LQ5T953 404 aa12.97□□□□□ -0.33
MATR3-218ENST00000511978 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
MATR3-218ENST00000511978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.337e-8■■■□□ 17
MATR3-218ENST00000511978 PPP1R37O75864 691 aa12.94□□□□□ -0.34
MATR3-218ENST00000511978 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
MATR3-218ENST00000511978 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
MATR3-218ENST00000511978 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
MATR3-218ENST00000511978 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
MATR3-218ENST00000511978 C7P10643 843 aa12.86□□□□□ -0.35
MATR3-218ENST00000511978 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
MATR3-218ENST00000511978 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
MATR3-218ENST00000511978 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
MATR3-218ENST00000511978 PLCG2P16885 1265 aa12.84□□□□□ -0.35
MATR3-218ENST00000511978 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
MATR3-218ENST00000511978 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
MATR3-218ENST00000511978 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
MATR3-218ENST00000511978 SEC24BO95487 1268 aa12.81□□□□□ -0.36
MATR3-218ENST00000511978 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
MATR3-218ENST00000511978 MICALL2Q8IY33 904 aa12.74□□□□□ -0.37
MATR3-218ENST00000511978 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
MATR3-218ENST00000511978 BOLA1Q9Y3E2 137 aa12.73□□□□□ -0.37
MATR3-218ENST00000511978 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
MATR3-218ENST00000511978 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
MATR3-218ENST00000511978 G3V3G9 751 aa12.66□□□□□ -0.38
MATR3-218ENST00000511978 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
MATR3-218ENST00000511978 PDE4AP27815 886 aa12.61□□□□□ -0.39
MATR3-218ENST00000511978 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms