RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-208ENST00000511895 HAX1O00165 279 aa15.47■□□□□ 0.07
LINC01088-208ENST00000511895 ZRANB1Q9UGI0 708 aa15.44■□□□□ 0.06
LINC01088-208ENST00000511895 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
LINC01088-208ENST00000511895 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
LINC01088-208ENST00000511895 PYGBP11216 843 aa15.39■□□□□ 0.05
LINC01088-208ENST00000511895 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
LINC01088-208ENST00000511895 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
LINC01088-208ENST00000511895 RGL2O15211 777 aa15.29■□□□□ 0.04
LINC01088-208ENST00000511895 CHRM1P11229 460 aaPredicted RBP15.29■□□□□ 0.04
LINC01088-208ENST00000511895 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
LINC01088-208ENST00000511895 EVX2Q03828 476 aa15.26■□□□□ 0.03
LINC01088-208ENST00000511895 ZNF579Q8NAF0 562 aaKnown RBP15.25■□□□□ 0.03
LINC01088-208ENST00000511895 KIF12Q96FN5 646 aa15.22■□□□□ 0.03
LINC01088-208ENST00000511895 MAP3K13O43283 966 aa15.21■□□□□ 0.03
LINC01088-208ENST00000511895 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
LINC01088-208ENST00000511895 RIOK3O14730 519 aaKnown RBP15.19■□□□□ 0.02
LINC01088-208ENST00000511895 RNF25Q96BH1 459 aaPredicted RBP15.19■□□□□ 0.02
LINC01088-208ENST00000511895 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
LINC01088-208ENST00000511895 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
LINC01088-208ENST00000511895 SGIP1Q9BQI5 828 aa15.14■□□□□ 0.01
LINC01088-208ENST00000511895 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
LINC01088-208ENST00000511895 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
LINC01088-208ENST00000511895 VGFO15240 615 aaPredicted RBP15.1■□□□□ 0.01
LINC01088-208ENST00000511895 MS4A3Q96HJ5 214 aa15.1■□□□□ 0.01
LINC01088-208ENST00000511895 CLCN6P51797 869 aa15.06■□□□□ 0
LINC01088-208ENST00000511895 CHGAP10645 457 aaKnown RBP15.05■□□□□ -0
LINC01088-208ENST00000511895 PDAP1Q13442 181 aaKnown RBP15.04■□□□□ -0
LINC01088-208ENST00000511895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.02■□□□□ -0
LINC01088-208ENST00000511895 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
LINC01088-208ENST00000511895 ZFP91Q96JP5 570 aaPredicted RBP15.02■□□□□ -0
LINC01088-208ENST00000511895 PSEN1P49768 467 aa15.01□□□□□ -0.01
LINC01088-208ENST00000511895 STK25O00506 426 aa15□□□□□ -0.01
LINC01088-208ENST00000511895 GABBR2O75899 941 aa15□□□□□ -0.01
LINC01088-208ENST00000511895 SP7Q8TDD2 431 aaPredicted RBP14.99□□□□□ -0.01
LINC01088-208ENST00000511895 TRPC6Q9Y210 931 aa14.96□□□□□ -0.01
LINC01088-208ENST00000511895 STK24Q9Y6E0 443 aa14.96□□□□□ -0.01
LINC01088-208ENST00000511895 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
LINC01088-208ENST00000511895 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
LINC01088-208ENST00000511895 TMEM106CQ9BVX2 250 aa14.92□□□□□ -0.02
LINC01088-208ENST00000511895 TIE1P35590 1138 aa14.89□□□□□ -0.03
LINC01088-208ENST00000511895 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
LINC01088-208ENST00000511895 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
LINC01088-208ENST00000511895 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
LINC01088-208ENST00000511895 TTLL13PA6NNM8 815 aa14.84□□□□□ -0.03
LINC01088-208ENST00000511895 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
LINC01088-208ENST00000511895 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
LINC01088-208ENST00000511895 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
LINC01088-208ENST00000511895 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
LINC01088-208ENST00000511895 TRIM35Q9UPQ4 493 aa14.77□□□□□ -0.05
LINC01088-208ENST00000511895 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
LINC01088-208ENST00000511895 EFCAB3Q8N7B9 438 aa14.76□□□□□ -0.05
LINC01088-208ENST00000511895 ASTLQ6HA08 431 aaPredicted RBP14.75□□□□□ -0.05
LINC01088-208ENST00000511895 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
LINC01088-208ENST00000511895 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
LINC01088-208ENST00000511895 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
LINC01088-208ENST00000511895 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
LINC01088-208ENST00000511895 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
LINC01088-208ENST00000511895 SPRYD3Q8NCJ5 442 aa14.67□□□□□ -0.06
LINC01088-208ENST00000511895 SOX12O15370 315 aa14.66□□□□□ -0.06
LINC01088-208ENST00000511895 POTEIP0CG38 1075 aa14.65□□□□□ -0.06
LINC01088-208ENST00000511895 PHF8Q9UPP1 1060 aa14.64□□□□□ -0.07
LINC01088-208ENST00000511895 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
LINC01088-208ENST00000511895 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
LINC01088-208ENST00000511895 RYDENQ9NUL5 291 aaKnown RBP14.63□□□□□ -0.07
LINC01088-208ENST00000511895 NLRP6P59044 892 aa14.62□□□□□ -0.07
LINC01088-208ENST00000511895 MFRPQ9BY79 579 aa14.62□□□□□ -0.07
LINC01088-208ENST00000511895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC01088-208ENST00000511895 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
LINC01088-208ENST00000511895 IER5LQ5T953 404 aa14.59□□□□□ -0.07
LINC01088-208ENST00000511895 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
LINC01088-208ENST00000511895 SEC24BO95487 1268 aa14.56□□□□□ -0.08
LINC01088-208ENST00000511895 C7P10643 843 aa14.54□□□□□ -0.08
LINC01088-208ENST00000511895 PLCG2P16885 1265 aa14.54□□□□□ -0.08
LINC01088-208ENST00000511895 FBXO22Q8NEZ5 403 aa14.54□□□□□ -0.08
LINC01088-208ENST00000511895 METRNQ9UJH8 293 aa14.54□□□□□ -0.08
LINC01088-208ENST00000511895 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
LINC01088-208ENST00000511895 OCEL1Q9H607 264 aa14.51□□□□□ -0.09
LINC01088-208ENST00000511895 MS4A4AQ96JQ5 239 aa14.5□□□□□ -0.09
LINC01088-208ENST00000511895 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
LINC01088-208ENST00000511895 COLQQ9Y215 455 aaPredicted RBP14.47□□□□□ -0.09
LINC01088-208ENST00000511895 DPY19L2Q6NUT2 758 aa14.45□□□□□ -0.1
LINC01088-208ENST00000511895 ILDR1Q86SU0 546 aaPredicted RBP14.45□□□□□ -0.1
LINC01088-208ENST00000511895 PDCD7Q8N8D1 485 aaKnown RBP14.45□□□□□ -0.1
LINC01088-208ENST00000511895 PPP1R37O75864 691 aa14.44□□□□□ -0.1
LINC01088-208ENST00000511895 G3V3G9 751 aa14.41□□□□□ -0.1
LINC01088-208ENST00000511895 POTEFA5A3E0 1075 aa14.4□□□□□ -0.1
LINC01088-208ENST00000511895 TSHZ2Q9NRE2 1034 aa14.38□□□□□ -0.11
LINC01088-208ENST00000511895 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
LINC01088-208ENST00000511895 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-208ENST00000511895 BOLA1Q9Y3E2 137 aa14.34□□□□□ -0.11
LINC01088-208ENST00000511895 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
LINC01088-208ENST00000511895 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
LINC01088-208ENST00000511895 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
LINC01088-208ENST00000511895 TMEM121BQ9BXQ6 578 aaPredicted RBP14.22□□□□□ -0.13
LINC01088-208ENST00000511895 POTEB2H3BUK9 544 aa14.19□□□□□ -0.14
LINC01088-208ENST00000511895 VSIG10Q8N0Z9 540 aa14.18□□□□□ -0.14
LINC01088-208ENST00000511895 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.16□□□□□ -0.14
LINC01088-208ENST00000511895 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
LINC01088-208ENST00000511895 PDE4AP27815 886 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms