RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-220ENST00000511816 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-220ENST00000511816 NUBP1P53384 320 aa9.92□□□□□ -0.82
CALCOCO2-220ENST00000511816 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
CALCOCO2-220ENST00000511816 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
CALCOCO2-220ENST00000511816 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
CALCOCO2-220ENST00000511816 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
CALCOCO2-220ENST00000511816 CLCN6P51797 869 aa9.85□□□□□ -0.83
CALCOCO2-220ENST00000511816 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
CALCOCO2-220ENST00000511816 DCAF8L2P0C7V8 631 aa9.84□□□□□ -0.83
CALCOCO2-220ENST00000511816 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
CALCOCO2-220ENST00000511816 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
CALCOCO2-220ENST00000511816 PKD2Q13563 968 aa9.8□□□□□ -0.84
CALCOCO2-220ENST00000511816 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
CALCOCO2-220ENST00000511816 PYGBP11216 843 aa9.77□□□□□ -0.85
CALCOCO2-220ENST00000511816 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
CALCOCO2-220ENST00000511816 LHX8Q68G74 356 aa9.74□□□□□ -0.85
CALCOCO2-220ENST00000511816 CHRM1P11229 460 aaPredicted RBP9.73□□□□□ -0.85
CALCOCO2-220ENST00000511816 SGIP1Q9BQI5 828 aa9.73□□□□□ -0.85
CALCOCO2-220ENST00000511816 PCDHB13Q9Y5F0 798 aa9.73□□□□□ -0.85
CALCOCO2-220ENST00000511816 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
CALCOCO2-220ENST00000511816 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
CALCOCO2-220ENST00000511816 KIF12Q96FN5 646 aa9.71□□□□□ -0.86
CALCOCO2-220ENST00000511816 MAP3K13O43283 966 aa9.69□□□□□ -0.86
CALCOCO2-220ENST00000511816 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
CALCOCO2-220ENST00000511816 MS4A3Q96HJ5 214 aa9.64□□□□□ -0.87
CALCOCO2-220ENST00000511816 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
CALCOCO2-220ENST00000511816 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
CALCOCO2-220ENST00000511816 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-220ENST00000511816 RGL2O15211 777 aa9.61□□□□□ -0.87
CALCOCO2-220ENST00000511816 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
CALCOCO2-220ENST00000511816 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
CALCOCO2-220ENST00000511816 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-220ENST00000511816 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
CALCOCO2-220ENST00000511816 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
CALCOCO2-220ENST00000511816 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
CALCOCO2-220ENST00000511816 TIE1P35590 1138 aa9.57□□□□□ -0.88
CALCOCO2-220ENST00000511816 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
CALCOCO2-220ENST00000511816 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
CALCOCO2-220ENST00000511816 PSEN1P49768 467 aa9.55□□□□□ -0.88
CALCOCO2-220ENST00000511816 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
CALCOCO2-220ENST00000511816 CHGAP10645 457 aaKnown RBP9.52□□□□□ -0.89
CALCOCO2-220ENST00000511816 RNF25Q96BH1 459 aaPredicted RBP9.52□□□□□ -0.89
CALCOCO2-220ENST00000511816 STK25O00506 426 aa9.5□□□□□ -0.89
CALCOCO2-220ENST00000511816 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
CALCOCO2-220ENST00000511816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-220ENST00000511816 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
CALCOCO2-220ENST00000511816 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-220ENST00000511816 ZFP91Q96JP5 570 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-220ENST00000511816 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-220ENST00000511816 MKRN3Q13064 507 aaKnown RBP9.48□□□□□ -0.89
CALCOCO2-220ENST00000511816 ASTLQ6HA08 431 aaPredicted RBP9.48□□□□□ -0.89
CALCOCO2-220ENST00000511816 OTUD5Q96G74 571 aa9.48□□□□□ -0.89
CALCOCO2-220ENST00000511816 TRPC6Q9Y210 931 aa9.47□□□□□ -0.89
CALCOCO2-220ENST00000511816 STK24Q9Y6E0 443 aa9.47□□□□□ -0.89
CALCOCO2-220ENST00000511816 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
CALCOCO2-220ENST00000511816 HS6ST3Q8IZP7 471 aa9.46□□□□□ -0.9
CALCOCO2-220ENST00000511816 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.9
CALCOCO2-220ENST00000511816 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
CALCOCO2-220ENST00000511816 TRIM35Q9UPQ4 493 aa9.46□□□□□ -0.9
CALCOCO2-220ENST00000511816 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO2-220ENST00000511816 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
CALCOCO2-220ENST00000511816 SLC39A7Q92504 469 aa9.44□□□□□ -0.9
CALCOCO2-220ENST00000511816 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
CALCOCO2-220ENST00000511816 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
CALCOCO2-220ENST00000511816 ATN1P54259 1190 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-220ENST00000511816 SEC24BO95487 1268 aa9.41□□□□□ -0.9
CALCOCO2-220ENST00000511816 IER5LQ5T953 404 aa9.41□□□□□ -0.9
CALCOCO2-220ENST00000511816 C7P10643 843 aa9.4□□□□□ -0.9
CALCOCO2-220ENST00000511816 DNAJC5Q9H3Z4 198 aa9.39□□□□□ -0.91
CALCOCO2-220ENST00000511816 VSIG10Q8N0Z9 540 aa9.38□□□□□ -0.91
CALCOCO2-220ENST00000511816 RYDENQ9NUL5 291 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-220ENST00000511816 PLCG2P16885 1265 aa9.37□□□□□ -0.91
CALCOCO2-220ENST00000511816 SOX12O15370 315 aa9.36□□□□□ -0.91
CALCOCO2-220ENST00000511816 METRNQ9UJH8 293 aa9.36□□□□□ -0.91
CALCOCO2-220ENST00000511816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.916e-7■■■■□ 22.4
CALCOCO2-220ENST00000511816 EFCAB3Q8N7B9 438 aa9.34□□□□□ -0.91
CALCOCO2-220ENST00000511816 G3V3G9 751 aa9.32□□□□□ -0.92
CALCOCO2-220ENST00000511816 NLRP6P59044 892 aa9.32□□□□□ -0.92
CALCOCO2-220ENST00000511816 OCEL1Q9H607 264 aa9.32□□□□□ -0.92
CALCOCO2-220ENST00000511816 POTEFA5A3E0 1075 aa9.31□□□□□ -0.92
CALCOCO2-220ENST00000511816 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
CALCOCO2-220ENST00000511816 IRX5P78411 483 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-220ENST00000511816 L3MBTL3Q96JM7 780 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO2-220ENST00000511816 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
CALCOCO2-220ENST00000511816 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
CALCOCO2-220ENST00000511816 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
CALCOCO2-220ENST00000511816 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-220ENST00000511816 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
CALCOCO2-220ENST00000511816 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
CALCOCO2-220ENST00000511816 COLQQ9Y215 455 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-220ENST00000511816 PDCD7Q8N8D1 485 aaKnown RBP9.2□□□□□ -0.94
CALCOCO2-220ENST00000511816 SCUBE2Q9NQ36 999 aa9.2□□□□□ -0.94
CALCOCO2-220ENST00000511816 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
CALCOCO2-220ENST00000511816 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO2-220ENST00000511816 BCANQ96GW7 911 aa9.19□□□□□ -0.94
CALCOCO2-220ENST00000511816 FBXO22Q8NEZ5 403 aa9.18□□□□□ -0.94
CALCOCO2-220ENST00000511816 BOLA1Q9Y3E2 137 aa9.18□□□□□ -0.94
CALCOCO2-220ENST00000511816 POTEMA6NI47 508 aa9.17□□□□□ -0.94
CALCOCO2-220ENST00000511816 POTEGQ6S5H5 508 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms