RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-208ENST00000511754 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
TNPO1-208ENST00000511754 SLC39A7Q92504 469 aa12.31□□□□□ -0.44
TNPO1-208ENST00000511754 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
TNPO1-208ENST00000511754 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
TNPO1-208ENST00000511754 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
TNPO1-208ENST00000511754 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
TNPO1-208ENST00000511754 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
TNPO1-208ENST00000511754 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
TNPO1-208ENST00000511754 MNX1P50219 401 aaPredicted RBP12.2□□□□□ -0.46
TNPO1-208ENST00000511754 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
TNPO1-208ENST00000511754 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
TNPO1-208ENST00000511754 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
TNPO1-208ENST00000511754 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
TNPO1-208ENST00000511754 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
TNPO1-208ENST00000511754 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
TNPO1-208ENST00000511754 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
TNPO1-208ENST00000511754 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
TNPO1-208ENST00000511754 TIE1P35590 1138 aa11.94□□□□□ -0.5
TNPO1-208ENST00000511754 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
TNPO1-208ENST00000511754 SEC24BO95487 1268 aa11.92□□□□□ -0.5
TNPO1-208ENST00000511754 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
TNPO1-208ENST00000511754 MAP3K13O43283 966 aa11.89□□□□□ -0.51
TNPO1-208ENST00000511754 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
TNPO1-208ENST00000511754 ST18O60284 1047 aa11.83□□□□□ -0.52
TNPO1-208ENST00000511754 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
TNPO1-208ENST00000511754 IER5LQ5T953 404 aa11.8□□□□□ -0.52
TNPO1-208ENST00000511754 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
TNPO1-208ENST00000511754 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
TNPO1-208ENST00000511754 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
TNPO1-208ENST00000511754 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
TNPO1-208ENST00000511754 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
TNPO1-208ENST00000511754 PROM2Q8N271 834 aa11.71□□□□□ -0.53
TNPO1-208ENST00000511754 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
TNPO1-208ENST00000511754 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
TNPO1-208ENST00000511754 MIER1Q8N108 512 aa11.67□□□□□ -0.54
TNPO1-208ENST00000511754 PLCG2P16885 1265 aa11.66□□□□□ -0.54
TNPO1-208ENST00000511754 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
TNPO1-208ENST00000511754 SNPHO15079 494 aa11.6□□□□□ -0.55
TNPO1-208ENST00000511754 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
TNPO1-208ENST00000511754 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
TNPO1-208ENST00000511754 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
TNPO1-208ENST00000511754 FKBP8Q14318 412 aa11.57□□□□□ -0.56
TNPO1-208ENST00000511754 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
TNPO1-208ENST00000511754 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
TNPO1-208ENST00000511754 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
TNPO1-208ENST00000511754 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
TNPO1-208ENST00000511754 NUBP1P53384 320 aa11.48□□□□□ -0.57
TNPO1-208ENST00000511754 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
TNPO1-208ENST00000511754 EMP3P54852 163 aa11.44□□□□□ -0.58
TNPO1-208ENST00000511754 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
TNPO1-208ENST00000511754 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
TNPO1-208ENST00000511754 KRTAP3-3Q9BYR6 98 aa11.39□□□□□ -0.59
TNPO1-208ENST00000511754 KRTAP3-2Q9BYR7 98 aa11.39□□□□□ -0.59
TNPO1-208ENST00000511754 FAM205CA6NFA0 338 aa11.36□□□□□ -0.59
TNPO1-208ENST00000511754 POTEB3A0JP26 581 aa11.35□□□□□ -0.59
TNPO1-208ENST00000511754 POTEBQ6S5H4 581 aa11.35□□□□□ -0.59
TNPO1-208ENST00000511754 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
TNPO1-208ENST00000511754 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
TNPO1-208ENST00000511754 PYGBP11216 843 aa11.3□□□□□ -0.6
TNPO1-208ENST00000511754 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
TNPO1-208ENST00000511754 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
TNPO1-208ENST00000511754 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
TNPO1-208ENST00000511754 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
TNPO1-208ENST00000511754 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
TNPO1-208ENST00000511754 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
TNPO1-208ENST00000511754 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
TNPO1-208ENST00000511754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.629e-9■■□□□ 13
TNPO1-208ENST00000511754 ZNF467Q7Z7K2 595 aaPredicted RBP11.13□□□□□ -0.63
TNPO1-208ENST00000511754 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
TNPO1-208ENST00000511754 ERBB3P21860 1342 aa11.1□□□□□ -0.63
TNPO1-208ENST00000511754 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
TNPO1-208ENST00000511754 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
TNPO1-208ENST00000511754 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
TNPO1-208ENST00000511754 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
TNPO1-208ENST00000511754 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
TNPO1-208ENST00000511754 G3V3G9 751 aa11.06□□□□□ -0.64
TNPO1-208ENST00000511754 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
TNPO1-208ENST00000511754 PSEN1P49768 467 aa11.04□□□□□ -0.64
TNPO1-208ENST00000511754 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
TNPO1-208ENST00000511754 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
TNPO1-208ENST00000511754 GSE1Q14687 1217 aa11.03□□□□□ -0.64
TNPO1-208ENST00000511754 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
TNPO1-208ENST00000511754 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
TNPO1-208ENST00000511754 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
TNPO1-208ENST00000511754 RIMBP2O15034 1052 aa10.97□□□□□ -0.65
TNPO1-208ENST00000511754 PTGER2P43116 358 aa10.95□□□□□ -0.66
TNPO1-208ENST00000511754 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
TNPO1-208ENST00000511754 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
TNPO1-208ENST00000511754 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
TNPO1-208ENST00000511754 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.66
TNPO1-208ENST00000511754 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
TNPO1-208ENST00000511754 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
TNPO1-208ENST00000511754 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
TNPO1-208ENST00000511754 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
TNPO1-208ENST00000511754 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
TNPO1-208ENST00000511754 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
TNPO1-208ENST00000511754 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
TNPO1-208ENST00000511754 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
TNPO1-208ENST00000511754 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
TNPO1-208ENST00000511754 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms