RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SLC39A7Q92504 469 aa9.21□□□□□ -0.94
TRAPPC11-207ENST00000511409 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC11-207ENST00000511409 C7P10643 843 aa9.19□□□□□ -0.94
TRAPPC11-207ENST00000511409 METRNQ9UJH8 293 aa9.19□□□□□ -0.94
TRAPPC11-207ENST00000511409 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
TRAPPC11-207ENST00000511409 PLEKHG5O94827 1062 aa9.16□□□□□ -0.94
TRAPPC11-207ENST00000511409 MIER1Q8N108 512 aa9.16□□□□□ -0.94
TRAPPC11-207ENST00000511409 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
TRAPPC11-207ENST00000511409 POTEMA6NI47 508 aa9.15□□□□□ -0.94
TRAPPC11-207ENST00000511409 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
TRAPPC11-207ENST00000511409 VASPP50552 380 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC11-207ENST00000511409 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
TRAPPC11-207ENST00000511409 ZBTB47Q9UFB7 747 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC11-207ENST00000511409 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
TRAPPC11-207ENST00000511409 AMER1Q5JTC6 1135 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC11-207ENST00000511409 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
TRAPPC11-207ENST00000511409 KIF12Q96FN5 646 aa9.11□□□□□ -0.95
TRAPPC11-207ENST00000511409 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
TRAPPC11-207ENST00000511409 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC11-207ENST00000511409 RTN4Q9NQC3 1192 aaKnown RBP9.09□□□□□ -0.95
TRAPPC11-207ENST00000511409 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC11-207ENST00000511409 TIE1P35590 1138 aa9.06□□□□□ -0.96
TRAPPC11-207ENST00000511409 SCUBE2Q9NQ36 999 aa9.06□□□□□ -0.96
TRAPPC11-207ENST00000511409 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC11-207ENST00000511409 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC11-207ENST00000511409 POTEFA5A3E0 1075 aa9.02□□□□□ -0.97
TRAPPC11-207ENST00000511409 RASEFQ8IZ41 740 aa9.01□□□□□ -0.97
TRAPPC11-207ENST00000511409 MAP3K13O43283 966 aa9□□□□□ -0.97
TRAPPC11-207ENST00000511409 NUBP1P53384 320 aa9□□□□□ -0.97
TRAPPC11-207ENST00000511409 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
TRAPPC11-207ENST00000511409 TRPC6Q9Y210 931 aa9□□□□□ -0.97
TRAPPC11-207ENST00000511409 IFNLR1Q8IU57 520 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC11-207ENST00000511409 IER5LQ5T953 404 aa8.97□□□□□ -0.97
TRAPPC11-207ENST00000511409 TTLL13PA6NNM8 815 aa8.96□□□□□ -0.98
TRAPPC11-207ENST00000511409 KLHL34Q8N239 644 aa8.94□□□□□ -0.98
TRAPPC11-207ENST00000511409 SPOCK2Q92563 424 aa8.92□□□□□ -0.98
TRAPPC11-207ENST00000511409 FAM212AQ96EL1 285 aa8.91□□□□□ -0.98
TRAPPC11-207ENST00000511409 COLQQ9Y215 455 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC11-207ENST00000511409 SEC24BO95487 1268 aa8.89□□□□□ -0.99
TRAPPC11-207ENST00000511409 FAM163AQ96GL9 167 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC11-207ENST00000511409 TRIM35Q9UPQ4 493 aa8.89□□□□□ -0.99
TRAPPC11-207ENST00000511409 PCDHB13Q9Y5F0 798 aa8.89□□□□□ -0.99
TRAPPC11-207ENST00000511409 GSE1Q14687 1217 aa8.86□□□□□ -0.99
TRAPPC11-207ENST00000511409 IFNL1Q8IU54 200 aa8.84□□□□□ -0.99
TRAPPC11-207ENST00000511409 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
TRAPPC11-207ENST00000511409 CHRM1P11229 460 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-207ENST00000511409 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
TRAPPC11-207ENST00000511409 TMEM106CQ9BVX2 250 aa8.79□□□□□ -1
TRAPPC11-207ENST00000511409 TRIM41Q8WV44 630 aa8.78□□□□□ -1
TRAPPC11-207ENST00000511409 PLCG2P16885 1265 aa8.77□□□□□ -1.01
TRAPPC11-207ENST00000511409 SLAIN1Q8ND83 568 aa8.77□□□□□ -1.01
TRAPPC11-207ENST00000511409 CDAN1Q8IWY9 1227 aa8.76□□□□□ -1.01
TRAPPC11-207ENST00000511409 ST18O60284 1047 aa8.74□□□□□ -1.01
TRAPPC11-207ENST00000511409 PYGBP11216 843 aa8.73□□□□□ -1.01
TRAPPC11-207ENST00000511409 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC11-207ENST00000511409 TMEM121BQ9BXQ6 578 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC11-207ENST00000511409 OCEL1Q9H607 264 aa8.72□□□□□ -1.01
TRAPPC11-207ENST00000511409 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
TRAPPC11-207ENST00000511409 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC11-207ENST00000511409 SNPHO15079 494 aa8.67□□□□□ -1.02
TRAPPC11-207ENST00000511409 PKD2Q13563 968 aa8.67□□□□□ -1.02
TRAPPC11-207ENST00000511409 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-207ENST00000511409 ECM2O94769 699 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC11-207ENST00000511409 PDCD7Q8N8D1 485 aaKnown RBP8.63□□□□□ -1.03
TRAPPC11-207ENST00000511409 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
TRAPPC11-207ENST00000511409 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
TRAPPC11-207ENST00000511409 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
TRAPPC11-207ENST00000511409 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
TRAPPC11-207ENST00000511409 RNF25Q96BH1 459 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC11-207ENST00000511409 MMRN1Q13201 1228 aa8.57□□□□□ -1.04
TRAPPC11-207ENST00000511409 ILDR1Q86SU0 546 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC11-207ENST00000511409 SPNS2Q8IVW8 549 aa8.57□□□□□ -1.04
TRAPPC11-207ENST00000511409 L3MBTL3Q96JM7 780 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC11-207ENST00000511409 PSEN1P49768 467 aa8.56□□□□□ -1.04
TRAPPC11-207ENST00000511409 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
TRAPPC11-207ENST00000511409 VGFO15240 615 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC11-207ENST00000511409 TAOK2Q9UL54 1235 aa8.55□□□□□ -1.04
TRAPPC11-207ENST00000511409 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-207ENST00000511409 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
TRAPPC11-207ENST00000511409 MARVELD3Q96A59 401 aa8.52□□□□□ -1.05
TRAPPC11-207ENST00000511409 RGL2O15211 777 aa8.5□□□□□ -1.05
TRAPPC11-207ENST00000511409 EMP3P54852 163 aa8.49□□□□□ -1.05
TRAPPC11-207ENST00000511409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.056e-6■■■□□ 18.8
TRAPPC11-207ENST00000511409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-207ENST00000511409 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-207ENST00000511409 HS3ST6Q96QI5 342 aa8.45□□□□□ -1.06
TRAPPC11-207ENST00000511409 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
TRAPPC11-207ENST00000511409 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
TRAPPC11-207ENST00000511409 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
TRAPPC11-207ENST00000511409 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
TRAPPC11-207ENST00000511409 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
TRAPPC11-207ENST00000511409 CABP2Q9NPB3 220 aa8.42□□□□□ -1.06
TRAPPC11-207ENST00000511409 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC11-207ENST00000511409 SOX12O15370 315 aa8.4□□□□□ -1.06
TRAPPC11-207ENST00000511409 CHGAP10645 457 aaKnown RBP8.4□□□□□ -1.06
TRAPPC11-207ENST00000511409 HOXB3P14651 431 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC11-207ENST00000511409 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC11-207ENST00000511409 DNAJC5Q9H3Z4 198 aa8.4□□□□□ -1.06
TRAPPC11-207ENST00000511409 BOLA1Q9Y3E2 137 aa8.4□□□□□ -1.06
TRAPPC11-207ENST00000511409 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms