RNA–Protein interactions for RNA: ENST00000511365.1

SNX2-210, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-210ENST00000511365 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
SNX2-210ENST00000511365 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
SNX2-210ENST00000511365 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
SNX2-210ENST00000511365 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
SNX2-210ENST00000511365 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
SNX2-210ENST00000511365 PKD2Q13563 968 aa12.22□□□□□ -0.45
SNX2-210ENST00000511365 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
SNX2-210ENST00000511365 POTEMA6NI47 508 aa12.19□□□□□ -0.46
SNX2-210ENST00000511365 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
SNX2-210ENST00000511365 NUBP1P53384 320 aa12.15□□□□□ -0.46
SNX2-210ENST00000511365 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
SNX2-210ENST00000511365 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
SNX2-210ENST00000511365 GSE1Q14687 1217 aa12.12□□□□□ -0.47
SNX2-210ENST00000511365 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
SNX2-210ENST00000511365 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
SNX2-210ENST00000511365 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
SNX2-210ENST00000511365 DCAF8L2P0C7V8 631 aa12.09□□□□□ -0.47
SNX2-210ENST00000511365 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
SNX2-210ENST00000511365 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
SNX2-210ENST00000511365 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
SNX2-210ENST00000511365 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
SNX2-210ENST00000511365 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
SNX2-210ENST00000511365 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
SNX2-210ENST00000511365 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
SNX2-210ENST00000511365 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
SNX2-210ENST00000511365 SLC39A7Q92504 469 aa11.98□□□□□ -0.49
SNX2-210ENST00000511365 RGL2O15211 777 aa11.97□□□□□ -0.49
SNX2-210ENST00000511365 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
SNX2-210ENST00000511365 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
SNX2-210ENST00000511365 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
SNX2-210ENST00000511365 C7P10643 843 aa11.96□□□□□ -0.49
SNX2-210ENST00000511365 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
SNX2-210ENST00000511365 PYGBP11216 843 aa11.91□□□□□ -0.5
SNX2-210ENST00000511365 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
SNX2-210ENST00000511365 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
SNX2-210ENST00000511365 SCUBE2Q9NQ36 999 aa11.88□□□□□ -0.51
SNX2-210ENST00000511365 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
SNX2-210ENST00000511365 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
SNX2-210ENST00000511365 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
SNX2-210ENST00000511365 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
SNX2-210ENST00000511365 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
SNX2-210ENST00000511365 MAP3K13O43283 966 aa11.82□□□□□ -0.52
SNX2-210ENST00000511365 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
SNX2-210ENST00000511365 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
SNX2-210ENST00000511365 LCE2DQ5TA82 110 aaPredicted RBP11.81□□□□□ -0.52
SNX2-210ENST00000511365 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
SNX2-210ENST00000511365 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
SNX2-210ENST00000511365 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
SNX2-210ENST00000511365 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
SNX2-210ENST00000511365 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
SNX2-210ENST00000511365 BBXQ8WY36 941 aaPredicted RBP11.76□□□□□ -0.53
SNX2-210ENST00000511365 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
SNX2-210ENST00000511365 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
SNX2-210ENST00000511365 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.53
SNX2-210ENST00000511365 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.53
SNX2-210ENST00000511365 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
SNX2-210ENST00000511365 PDAP1Q13442 181 aaKnown RBP11.69□□□□□ -0.54
SNX2-210ENST00000511365 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
SNX2-210ENST00000511365 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
SNX2-210ENST00000511365 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
SNX2-210ENST00000511365 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
SNX2-210ENST00000511365 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
SNX2-210ENST00000511365 TIE1P35590 1138 aa11.65□□□□□ -0.54
SNX2-210ENST00000511365 PSEN1P49768 467 aa11.65□□□□□ -0.54
SNX2-210ENST00000511365 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
SNX2-210ENST00000511365 TMEM106CQ9BVX2 250 aa11.62□□□□□ -0.55
SNX2-210ENST00000511365 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
SNX2-210ENST00000511365 SEC24BO95487 1268 aa11.6□□□□□ -0.55
SNX2-210ENST00000511365 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
SNX2-210ENST00000511365 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
SNX2-210ENST00000511365 STK25O00506 426 aa11.59□□□□□ -0.55
SNX2-210ENST00000511365 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
SNX2-210ENST00000511365 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
SNX2-210ENST00000511365 TTLL13PA6NNM8 815 aa11.57□□□□□ -0.56
SNX2-210ENST00000511365 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
SNX2-210ENST00000511365 BCL11BQ9C0K0 894 aaPredicted RBP11.55□□□□□ -0.56
SNX2-210ENST00000511365 STK24Q9Y6E0 443 aa11.55□□□□□ -0.56
SNX2-210ENST00000511365 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
SNX2-210ENST00000511365 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
SNX2-210ENST00000511365 IER5LQ5T953 404 aa11.52□□□□□ -0.57
SNX2-210ENST00000511365 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
SNX2-210ENST00000511365 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
SNX2-210ENST00000511365 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
SNX2-210ENST00000511365 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
SNX2-210ENST00000511365 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
SNX2-210ENST00000511365 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
SNX2-210ENST00000511365 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
SNX2-210ENST00000511365 ST18O60284 1047 aa11.45□□□□□ -0.58
SNX2-210ENST00000511365 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
SNX2-210ENST00000511365 EFCAB3Q8N7B9 438 aa11.42□□□□□ -0.58
SNX2-210ENST00000511365 SOX12O15370 315 aa11.4□□□□□ -0.58
SNX2-210ENST00000511365 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
SNX2-210ENST00000511365 PLCG2P16885 1265 aa11.37□□□□□ -0.59
SNX2-210ENST00000511365 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
SNX2-210ENST00000511365 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNX2-210ENST00000511365 NLRP6P59044 892 aa11.36□□□□□ -0.59
SNX2-210ENST00000511365 TMEM121BQ9BXQ6 578 aaPredicted RBP11.36□□□□□ -0.59
SNX2-210ENST00000511365 SPNS2Q8IVW8 549 aa11.34□□□□□ -0.59
SNX2-210ENST00000511365 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
SNX2-210ENST00000511365 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms