RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 DCBLD2Q96PD2 775 aa11.46□□□□□ -0.57
SCARB2-205ENST00000511129 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
SCARB2-205ENST00000511129 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-205ENST00000511129 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
SCARB2-205ENST00000511129 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
SCARB2-205ENST00000511129 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-205ENST00000511129 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
SCARB2-205ENST00000511129 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
SCARB2-205ENST00000511129 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-205ENST00000511129 PKD2Q13563 968 aa11.23□□□□□ -0.61
SCARB2-205ENST00000511129 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
SCARB2-205ENST00000511129 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
SCARB2-205ENST00000511129 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-205ENST00000511129 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
SCARB2-205ENST00000511129 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-205ENST00000511129 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-205ENST00000511129 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
SCARB2-205ENST00000511129 GSE1Q14687 1217 aa11.19□□□□□ -0.62
SCARB2-205ENST00000511129 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
SCARB2-205ENST00000511129 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SCARB2-205ENST00000511129 NUBP1P53384 320 aa11.17□□□□□ -0.62
SCARB2-205ENST00000511129 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
SCARB2-205ENST00000511129 MAP3K13O43283 966 aa11.14□□□□□ -0.63
SCARB2-205ENST00000511129 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
SCARB2-205ENST00000511129 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
SCARB2-205ENST00000511129 OTUD5Q96G74 571 aa11.12□□□□□ -0.63
SCARB2-205ENST00000511129 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
SCARB2-205ENST00000511129 ATN1P54259 1190 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-205ENST00000511129 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
SCARB2-205ENST00000511129 C7P10643 843 aa11.1□□□□□ -0.63
SCARB2-205ENST00000511129 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-205ENST00000511129 TIE1P35590 1138 aa11.06□□□□□ -0.64
SCARB2-205ENST00000511129 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
SCARB2-205ENST00000511129 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
SCARB2-205ENST00000511129 RGL2O15211 777 aa11.02□□□□□ -0.65
SCARB2-205ENST00000511129 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
SCARB2-205ENST00000511129 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
SCARB2-205ENST00000511129 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
SCARB2-205ENST00000511129 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
SCARB2-205ENST00000511129 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
SCARB2-205ENST00000511129 PYGBP11216 843 aa10.96□□□□□ -0.65
SCARB2-205ENST00000511129 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
SCARB2-205ENST00000511129 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
SCARB2-205ENST00000511129 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
SCARB2-205ENST00000511129 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
SCARB2-205ENST00000511129 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-205ENST00000511129 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
SCARB2-205ENST00000511129 SEC24BO95487 1268 aa10.88□□□□□ -0.67
SCARB2-205ENST00000511129 IER5LQ5T953 404 aa10.88□□□□□ -0.67
SCARB2-205ENST00000511129 RNF25Q96BH1 459 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-205ENST00000511129 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
SCARB2-205ENST00000511129 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
SCARB2-205ENST00000511129 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-205ENST00000511129 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-205ENST00000511129 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
SCARB2-205ENST00000511129 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-205ENST00000511129 ZNF467Q7Z7K2 595 aaPredicted RBP10.84□□□□□ -0.67
SCARB2-205ENST00000511129 PCDHB8Q9UN66 801 aa10.82□□□□□ -0.68
SCARB2-205ENST00000511129 POTEMA6NI47 508 aa10.8□□□□□ -0.68
SCARB2-205ENST00000511129 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
SCARB2-205ENST00000511129 HS6ST3Q8IZP7 471 aa10.8□□□□□ -0.68
SCARB2-205ENST00000511129 STK25O00506 426 aa10.79□□□□□ -0.68
SCARB2-205ENST00000511129 IRX5P78411 483 aaPredicted RBP10.77□□□□□ -0.69
SCARB2-205ENST00000511129 POTEGQ6S5H5 508 aa10.77□□□□□ -0.69
SCARB2-205ENST00000511129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-205ENST00000511129 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-205ENST00000511129 PLCG2P16885 1265 aa10.75□□□□□ -0.69
SCARB2-205ENST00000511129 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-205ENST00000511129 STK24Q9Y6E0 443 aa10.75□□□□□ -0.69
SCARB2-205ENST00000511129 PDAP1Q13442 181 aaKnown RBP10.74□□□□□ -0.69
SCARB2-205ENST00000511129 PAXIP1Q6ZW49 1069 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-205ENST00000511129 FAM163AQ96GL9 167 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-205ENST00000511129 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
SCARB2-205ENST00000511129 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-205ENST00000511129 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
SCARB2-205ENST00000511129 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
SCARB2-205ENST00000511129 PSEN1P49768 467 aa10.7□□□□□ -0.7
SCARB2-205ENST00000511129 PLSCR2Q9NRY7 297 aa10.7□□□□□ -0.7
SCARB2-205ENST00000511129 HAP1P54257 671 aaPredicted RBP10.69□□□□□ -0.7
SCARB2-205ENST00000511129 DNAJC5Q9H3Z4 198 aa10.68□□□□□ -0.7
SCARB2-205ENST00000511129 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
SCARB2-205ENST00000511129 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
SCARB2-205ENST00000511129 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
SCARB2-205ENST00000511129 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
SCARB2-205ENST00000511129 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
SCARB2-205ENST00000511129 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
SCARB2-205ENST00000511129 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-205ENST00000511129 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
SCARB2-205ENST00000511129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCARB2-205ENST00000511129 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
SCARB2-205ENST00000511129 GTPBP6O43824 516 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-205ENST00000511129 ST18O60284 1047 aa10.54□□□□□ -0.72
SCARB2-205ENST00000511129 ILDR1Q86SU0 546 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-205ENST00000511129 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-205ENST00000511129 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
SCARB2-205ENST00000511129 SOX12O15370 315 aa10.51□□□□□ -0.73
SCARB2-205ENST00000511129 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
SCARB2-205ENST00000511129 NLRP6P59044 892 aa10.49□□□□□ -0.73
SCARB2-205ENST00000511129 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
SCARB2-205ENST00000511129 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms