RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 POTEIP0CG38 1075 aa11.18□□□□□ -0.62
MBD4-209ENST00000511009 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
MBD4-209ENST00000511009 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
MBD4-209ENST00000511009 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
MBD4-209ENST00000511009 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
MBD4-209ENST00000511009 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
MBD4-209ENST00000511009 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
MBD4-209ENST00000511009 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
MBD4-209ENST00000511009 MAP3K13O43283 966 aa11.03□□□□□ -0.64
MBD4-209ENST00000511009 FAM212AQ96EL1 285 aa11.02□□□□□ -0.65
MBD4-209ENST00000511009 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
MBD4-209ENST00000511009 TRPC6Q9Y210 931 aa11□□□□□ -0.65
MBD4-209ENST00000511009 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
MBD4-209ENST00000511009 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
MBD4-209ENST00000511009 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
MBD4-209ENST00000511009 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
MBD4-209ENST00000511009 SGIP1Q9BQI5 828 aa10.97□□□□□ -0.65
MBD4-209ENST00000511009 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
MBD4-209ENST00000511009 DCAF8Q5TAQ9 597 aa10.95□□□□□ -0.66
MBD4-209ENST00000511009 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
MBD4-209ENST00000511009 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
MBD4-209ENST00000511009 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
MBD4-209ENST00000511009 PYGBP11216 843 aa10.91□□□□□ -0.66
MBD4-209ENST00000511009 CHRM1P11229 460 aaPredicted RBP10.91□□□□□ -0.66
MBD4-209ENST00000511009 GSE1Q14687 1217 aa10.91□□□□□ -0.66
MBD4-209ENST00000511009 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
MBD4-209ENST00000511009 TIE1P35590 1138 aa10.88□□□□□ -0.67
MBD4-209ENST00000511009 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
MBD4-209ENST00000511009 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
MBD4-209ENST00000511009 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
MBD4-209ENST00000511009 POTEB2H3BUK9 544 aa10.82□□□□□ -0.68
MBD4-209ENST00000511009 PCDHB8Q9UN66 801 aa10.82□□□□□ -0.68
MBD4-209ENST00000511009 PKD2Q13563 968 aa10.81□□□□□ -0.68
MBD4-209ENST00000511009 LHX8Q68G74 356 aa10.81□□□□□ -0.68
MBD4-209ENST00000511009 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
MBD4-209ENST00000511009 CIZ1Q9ULV3 898 aaPredicted RBP10.79□□□□□ -0.68
MBD4-209ENST00000511009 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
MBD4-209ENST00000511009 C7P10643 843 aa10.77□□□□□ -0.69
MBD4-209ENST00000511009 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
MBD4-209ENST00000511009 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
MBD4-209ENST00000511009 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
MBD4-209ENST00000511009 POTEJP0CG39 1038 aa10.74□□□□□ -0.69
MBD4-209ENST00000511009 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
MBD4-209ENST00000511009 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
MBD4-209ENST00000511009 ECM2O94769 699 aaPredicted RBP10.72□□□□□ -0.69
MBD4-209ENST00000511009 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
MBD4-209ENST00000511009 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
MBD4-209ENST00000511009 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
MBD4-209ENST00000511009 IER5LQ5T953 404 aa10.69□□□□□ -0.7
MBD4-209ENST00000511009 PSEN1P49768 467 aa10.67□□□□□ -0.7
MBD4-209ENST00000511009 OTUD5Q96G74 571 aa10.67□□□□□ -0.7
MBD4-209ENST00000511009 IRX5P78411 483 aaPredicted RBP10.66□□□□□ -0.7
MBD4-209ENST00000511009 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.66□□□□□ -0.7
MBD4-209ENST00000511009 PDAP1Q13442 181 aaKnown RBP10.65□□□□□ -0.7
MBD4-209ENST00000511009 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
MBD4-209ENST00000511009 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
MBD4-209ENST00000511009 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
MBD4-209ENST00000511009 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
MBD4-209ENST00000511009 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
MBD4-209ENST00000511009 RGL2O15211 777 aa10.55□□□□□ -0.72
MBD4-209ENST00000511009 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
MBD4-209ENST00000511009 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
MBD4-209ENST00000511009 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
MBD4-209ENST00000511009 SEC24BO95487 1268 aa10.53□□□□□ -0.72
MBD4-209ENST00000511009 BCANQ96GW7 911 aa10.53□□□□□ -0.72
MBD4-209ENST00000511009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
MBD4-209ENST00000511009 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
MBD4-209ENST00000511009 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.73
MBD4-209ENST00000511009 PLCG2P16885 1265 aa10.51□□□□□ -0.73
MBD4-209ENST00000511009 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
MBD4-209ENST00000511009 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
MBD4-209ENST00000511009 MAMSTRQ6ZN01 415 aa10.47□□□□□ -0.73
MBD4-209ENST00000511009 EFCAB3Q8N7B9 438 aa10.47□□□□□ -0.73
MBD4-209ENST00000511009 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
MBD4-209ENST00000511009 SPRYD3Q8NCJ5 442 aa10.45□□□□□ -0.74
MBD4-209ENST00000511009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
MBD4-209ENST00000511009 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
MBD4-209ENST00000511009 GOLGA2Q08379 1002 aa10.43□□□□□ -0.74
MBD4-209ENST00000511009 SCUBE2Q9NQ36 999 aa10.42□□□□□ -0.74
MBD4-209ENST00000511009 MS4A4AQ96JQ5 239 aa10.41□□□□□ -0.74
MBD4-209ENST00000511009 BCL11BQ9C0K0 894 aaPredicted RBP10.41□□□□□ -0.74
MBD4-209ENST00000511009 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
MBD4-209ENST00000511009 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
MBD4-209ENST00000511009 SOX12O15370 315 aa10.37□□□□□ -0.75
MBD4-209ENST00000511009 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
MBD4-209ENST00000511009 TMEM121BQ9BXQ6 578 aaPredicted RBP10.36□□□□□ -0.75
MBD4-209ENST00000511009 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
MBD4-209ENST00000511009 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
MBD4-209ENST00000511009 STK25O00506 426 aa10.34□□□□□ -0.75
MBD4-209ENST00000511009 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
MBD4-209ENST00000511009 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
MBD4-209ENST00000511009 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
MBD4-209ENST00000511009 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
MBD4-209ENST00000511009 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
MBD4-209ENST00000511009 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
MBD4-209ENST00000511009 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
MBD4-209ENST00000511009 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
MBD4-209ENST00000511009 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
MBD4-209ENST00000511009 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
MBD4-209ENST00000511009 NLRP6P59044 892 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms