RNA–Protein interactions for RNA: ENST00000510997.1

CALCOCO2-218, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 674 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-218ENST00000510997 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
CALCOCO2-218ENST00000510997 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-218ENST00000510997 ZNF579Q8NAF0 562 aaKnown RBP13.57□□□□□ -0.24
CALCOCO2-218ENST00000510997 PKD2Q13563 968 aa13.54□□□□□ -0.24
CALCOCO2-218ENST00000510997 CHRM1P11229 460 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO2-218ENST00000510997 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO2-218ENST00000510997 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
CALCOCO2-218ENST00000510997 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
CALCOCO2-218ENST00000510997 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
CALCOCO2-218ENST00000510997 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
CALCOCO2-218ENST00000510997 PYGBP11216 843 aa13.47□□□□□ -0.25
CALCOCO2-218ENST00000510997 CLCN6P51797 869 aa13.45□□□□□ -0.26
CALCOCO2-218ENST00000510997 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO2-218ENST00000510997 MAP3K13O43283 966 aa13.43□□□□□ -0.26
CALCOCO2-218ENST00000510997 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
CALCOCO2-218ENST00000510997 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO2-218ENST00000510997 GABBR2O75899 941 aa13.39□□□□□ -0.27
CALCOCO2-218ENST00000510997 PCDHB13Q9Y5F0 798 aa13.36□□□□□ -0.27
CALCOCO2-218ENST00000510997 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
CALCOCO2-218ENST00000510997 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO2-218ENST00000510997 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
CALCOCO2-218ENST00000510997 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO2-218ENST00000510997 RGL2O15211 777 aa13.31□□□□□ -0.28
CALCOCO2-218ENST00000510997 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
CALCOCO2-218ENST00000510997 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
CALCOCO2-218ENST00000510997 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
CALCOCO2-218ENST00000510997 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
CALCOCO2-218ENST00000510997 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
CALCOCO2-218ENST00000510997 VGFO15240 615 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-218ENST00000510997 TIE1P35590 1138 aa13.19□□□□□ -0.3
CALCOCO2-218ENST00000510997 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
CALCOCO2-218ENST00000510997 PSEN1P49768 467 aa13.17□□□□□ -0.3
CALCOCO2-218ENST00000510997 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
CALCOCO2-218ENST00000510997 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-218ENST00000510997 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
CALCOCO2-218ENST00000510997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-218ENST00000510997 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
CALCOCO2-218ENST00000510997 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
CALCOCO2-218ENST00000510997 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-218ENST00000510997 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-218ENST00000510997 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
CALCOCO2-218ENST00000510997 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-218ENST00000510997 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO2-218ENST00000510997 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
CALCOCO2-218ENST00000510997 STK25O00506 426 aa13.04□□□□□ -0.32
CALCOCO2-218ENST00000510997 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-218ENST00000510997 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
CALCOCO2-218ENST00000510997 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
CALCOCO2-218ENST00000510997 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
CALCOCO2-218ENST00000510997 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-218ENST00000510997 STK24Q9Y6E0 443 aa13□□□□□ -0.33
CALCOCO2-218ENST00000510997 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
CALCOCO2-218ENST00000510997 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
CALCOCO2-218ENST00000510997 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
CALCOCO2-218ENST00000510997 IER5LQ5T953 404 aa12.94□□□□□ -0.34
CALCOCO2-218ENST00000510997 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
CALCOCO2-218ENST00000510997 SLC39A7Q92504 469 aa12.93□□□□□ -0.34
CALCOCO2-218ENST00000510997 C7P10643 843 aa12.92□□□□□ -0.34
CALCOCO2-218ENST00000510997 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
CALCOCO2-218ENST00000510997 SOX12O15370 315 aa12.89□□□□□ -0.35
CALCOCO2-218ENST00000510997 ILDR1Q86SU0 546 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-218ENST00000510997 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-218ENST00000510997 METRNQ9UJH8 293 aa12.88□□□□□ -0.35
CALCOCO2-218ENST00000510997 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO2-218ENST00000510997 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-218ENST00000510997 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
CALCOCO2-218ENST00000510997 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
CALCOCO2-218ENST00000510997 COLQQ9Y215 455 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-218ENST00000510997 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
CALCOCO2-218ENST00000510997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
CALCOCO2-218ENST00000510997 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
CALCOCO2-218ENST00000510997 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
CALCOCO2-218ENST00000510997 FBXO22Q8NEZ5 403 aa12.81□□□□□ -0.36
CALCOCO2-218ENST00000510997 SEC24BO95487 1268 aa12.8□□□□□ -0.36
CALCOCO2-218ENST00000510997 NLRP6P59044 892 aa12.8□□□□□ -0.36
CALCOCO2-218ENST00000510997 PLCG2P16885 1265 aa12.78□□□□□ -0.36
CALCOCO2-218ENST00000510997 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
CALCOCO2-218ENST00000510997 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO2-218ENST00000510997 RYDENQ9NUL5 291 aaKnown RBP12.73□□□□□ -0.37
CALCOCO2-218ENST00000510997 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO2-218ENST00000510997 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
CALCOCO2-218ENST00000510997 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
CALCOCO2-218ENST00000510997 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
CALCOCO2-218ENST00000510997 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
CALCOCO2-218ENST00000510997 PPP1R37O75864 691 aa12.65□□□□□ -0.38
CALCOCO2-218ENST00000510997 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO2-218ENST00000510997 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-218ENST00000510997 TMEM121BQ9BXQ6 578 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-218ENST00000510997 LHX8Q68G74 356 aa12.62□□□□□ -0.39
CALCOCO2-218ENST00000510997 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
CALCOCO2-218ENST00000510997 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
CALCOCO2-218ENST00000510997 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
CALCOCO2-218ENST00000510997 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
CALCOCO2-218ENST00000510997 G3V3G9 751 aa12.54□□□□□ -0.4
CALCOCO2-218ENST00000510997 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
CALCOCO2-218ENST00000510997 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
CALCOCO2-218ENST00000510997 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
CALCOCO2-218ENST00000510997 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
CALCOCO2-218ENST00000510997 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CALCOCO2-218ENST00000510997 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms