RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
RFC1-212ENST00000510783 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
RFC1-212ENST00000510783 IFNLR1Q8IU57 520 aaPredicted RBP15.46■□□□□ 0.07
RFC1-212ENST00000510783 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
RFC1-212ENST00000510783 FAM212AQ96EL1 285 aa15.44■□□□□ 0.06
RFC1-212ENST00000510783 DCBLD2Q96PD2 775 aa15.43■□□□□ 0.06
RFC1-212ENST00000510783 KIF12Q96FN5 646 aa15.42■□□□□ 0.06
RFC1-212ENST00000510783 MS4A3Q96HJ5 214 aa15.42■□□□□ 0.06
RFC1-212ENST00000510783 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
RFC1-212ENST00000510783 MAP3K13O43283 966 aa15.37■□□□□ 0.05
RFC1-212ENST00000510783 SPOCK2Q92563 424 aa15.32■□□□□ 0.04
RFC1-212ENST00000510783 PYGBP11216 843 aa15.26■□□□□ 0.03
RFC1-212ENST00000510783 GSE1Q14687 1217 aa15.26■□□□□ 0.03
RFC1-212ENST00000510783 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
RFC1-212ENST00000510783 TRPC6Q9Y210 931 aa15.25■□□□□ 0.03
RFC1-212ENST00000510783 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
RFC1-212ENST00000510783 ATMINO43313 823 aaPredicted RBP15.2■□□□□ 0.02
RFC1-212ENST00000510783 ASTLQ6HA08 431 aaPredicted RBP15.2■□□□□ 0.02
RFC1-212ENST00000510783 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
RFC1-212ENST00000510783 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
RFC1-212ENST00000510783 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
RFC1-212ENST00000510783 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
RFC1-212ENST00000510783 TIE1P35590 1138 aa15.14■□□□□ 0.01
RFC1-212ENST00000510783 ATN1P54259 1190 aaPredicted RBP15.13■□□□□ 0.01
RFC1-212ENST00000510783 LHX8Q68G74 356 aa15.11■□□□□ 0.01
RFC1-212ENST00000510783 PCDHB8Q9UN66 801 aa15.1■□□□□ 0.01
RFC1-212ENST00000510783 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
RFC1-212ENST00000510783 CHRM1P11229 460 aaPredicted RBP15.09■□□□□ 0.01
RFC1-212ENST00000510783 SLC39A7Q92504 469 aa15.04■□□□□ -0
RFC1-212ENST00000510783 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
RFC1-212ENST00000510783 METRNQ9UJH8 293 aa15.03■□□□□ -0
RFC1-212ENST00000510783 C7P10643 843 aa15.01□□□□□ -0.01
RFC1-212ENST00000510783 ZNF467Q7Z7K2 595 aaPredicted RBP15.01□□□□□ -0.01
RFC1-212ENST00000510783 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
RFC1-212ENST00000510783 POTEB2H3BUK9 544 aa14.96□□□□□ -0.01
RFC1-212ENST00000510783 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
RFC1-212ENST00000510783 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
RFC1-212ENST00000510783 PSEN1P49768 467 aa14.89□□□□□ -0.03
RFC1-212ENST00000510783 PDAP1Q13442 181 aaKnown RBP14.86□□□□□ -0.03
RFC1-212ENST00000510783 IER5LQ5T953 404 aa14.86□□□□□ -0.03
RFC1-212ENST00000510783 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
RFC1-212ENST00000510783 SEC24BO95487 1268 aa14.85□□□□□ -0.03
RFC1-212ENST00000510783 POTEJP0CG39 1038 aa14.81□□□□□ -0.04
RFC1-212ENST00000510783 RNF25Q96BH1 459 aaPredicted RBP14.8□□□□□ -0.04
RFC1-212ENST00000510783 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
RFC1-212ENST00000510783 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.05
RFC1-212ENST00000510783 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
RFC1-212ENST00000510783 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
RFC1-212ENST00000510783 PKD2Q13563 968 aa14.76□□□□□ -0.05
RFC1-212ENST00000510783 ECM2O94769 699 aaPredicted RBP14.75□□□□□ -0.05
RFC1-212ENST00000510783 PLCG2P16885 1265 aa14.74□□□□□ -0.05
RFC1-212ENST00000510783 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
RFC1-212ENST00000510783 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
RFC1-212ENST00000510783 OCEL1Q9H607 264 aa14.71□□□□□ -0.05
RFC1-212ENST00000510783 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
RFC1-212ENST00000510783 MAMSTRQ6ZN01 415 aa14.68□□□□□ -0.06
RFC1-212ENST00000510783 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
RFC1-212ENST00000510783 ZFP91Q96JP5 570 aaPredicted RBP14.66□□□□□ -0.06
RFC1-212ENST00000510783 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
RFC1-212ENST00000510783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.64□□□□□ -0.075e-7■■□□□ 11.9
RFC1-212ENST00000510783 RGL2O15211 777 aa14.63□□□□□ -0.07
RFC1-212ENST00000510783 PDCD7Q8N8D1 485 aaKnown RBP14.61□□□□□ -0.07
RFC1-212ENST00000510783 EFCAB3Q8N7B9 438 aa14.6□□□□□ -0.07
RFC1-212ENST00000510783 TAOK2Q9UL54 1235 aa14.58□□□□□ -0.08
RFC1-212ENST00000510783 ILDR1Q86SU0 546 aaPredicted RBP14.56□□□□□ -0.08
RFC1-212ENST00000510783 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
RFC1-212ENST00000510783 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.09
RFC1-212ENST00000510783 STK24Q9Y6E0 443 aa14.51□□□□□ -0.09
RFC1-212ENST00000510783 STK25O00506 426 aa14.5□□□□□ -0.09
RFC1-212ENST00000510783 L3MBTL3Q96JM7 780 aaPredicted RBP14.48□□□□□ -0.09
RFC1-212ENST00000510783 SOX12O15370 315 aa14.46□□□□□ -0.09
RFC1-212ENST00000510783 SLAIN1Q8ND83 568 aa14.46□□□□□ -0.09
RFC1-212ENST00000510783 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.43□□□□□ -0.1
RFC1-212ENST00000510783 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
RFC1-212ENST00000510783 C3orf67Q6ZVT6 689 aa14.4□□□□□ -0.1
RFC1-212ENST00000510783 BOLA1Q9Y3E2 137 aa14.39□□□□□ -0.11
RFC1-212ENST00000510783 G3V3G9 751 aa14.38□□□□□ -0.11
RFC1-212ENST00000510783 MS4A4AQ96JQ5 239 aa14.38□□□□□ -0.11
RFC1-212ENST00000510783 NLRP6P59044 892 aa14.34□□□□□ -0.11
RFC1-212ENST00000510783 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
RFC1-212ENST00000510783 MFRPQ9BY79 579 aa14.34□□□□□ -0.11
RFC1-212ENST00000510783 FBXO22Q8NEZ5 403 aa14.32□□□□□ -0.12
RFC1-212ENST00000510783 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
RFC1-212ENST00000510783 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
RFC1-212ENST00000510783 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
RFC1-212ENST00000510783 MICALL2Q8IY33 904 aa14.27□□□□□ -0.13
RFC1-212ENST00000510783 LCE2DQ5TA82 110 aaPredicted RBP14.26□□□□□ -0.13
RFC1-212ENST00000510783 POTEMA6NI47 508 aa14.19□□□□□ -0.14
RFC1-212ENST00000510783 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
RFC1-212ENST00000510783 SNPHO15079 494 aa14.18□□□□□ -0.14
RFC1-212ENST00000510783 POTEGQ6S5H5 508 aa14.18□□□□□ -0.14
RFC1-212ENST00000510783 ST18O60284 1047 aa14.16□□□□□ -0.14
RFC1-212ENST00000510783 TMEM92Q6UXU6 159 aa14.16□□□□□ -0.14
RFC1-212ENST00000510783 PPP1R37O75864 691 aa14.13□□□□□ -0.15
RFC1-212ENST00000510783 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
RFC1-212ENST00000510783 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
RFC1-212ENST00000510783 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
RFC1-212ENST00000510783 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
RFC1-212ENST00000510783 HOXB3P14651 431 aaPredicted RBP14.04□□□□□ -0.16
RFC1-212ENST00000510783 MARVELD3Q96A59 401 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms