RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
ARHGEF28-209ENST00000510131 ZBTB47Q9UFB7 747 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF28-209ENST00000510131 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
ARHGEF28-209ENST00000510131 NUBP1P53384 320 aa14.42□□□□□ -0.1
ARHGEF28-209ENST00000510131 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
ARHGEF28-209ENST00000510131 MAP3K13O43283 966 aa14.35□□□□□ -0.11
ARHGEF28-209ENST00000510131 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
ARHGEF28-209ENST00000510131 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF28-209ENST00000510131 ASTLQ6HA08 431 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF28-209ENST00000510131 ATMINO43313 823 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF28-209ENST00000510131 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
ARHGEF28-209ENST00000510131 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
ARHGEF28-209ENST00000510131 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
ARHGEF28-209ENST00000510131 ATN1P54259 1190 aaPredicted RBP14.23□□□□□ -0.13
ARHGEF28-209ENST00000510131 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
ARHGEF28-209ENST00000510131 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
ARHGEF28-209ENST00000510131 SGIP1Q9BQI5 828 aa14.22□□□□□ -0.13
ARHGEF28-209ENST00000510131 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
ARHGEF28-209ENST00000510131 SLC39A7Q92504 469 aa14.21□□□□□ -0.13
ARHGEF28-209ENST00000510131 TIE1P35590 1138 aa14.2□□□□□ -0.14
ARHGEF28-209ENST00000510131 METRNQ9UJH8 293 aa14.2□□□□□ -0.14
ARHGEF28-209ENST00000510131 POTEB2H3BUK9 544 aa14.19□□□□□ -0.14
ARHGEF28-209ENST00000510131 C7P10643 843 aa14.19□□□□□ -0.14
ARHGEF28-209ENST00000510131 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
ARHGEF28-209ENST00000510131 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
ARHGEF28-209ENST00000510131 PYGBP11216 843 aa14.13□□□□□ -0.15
ARHGEF28-209ENST00000510131 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
ARHGEF28-209ENST00000510131 GSE1Q14687 1217 aa14.08□□□□□ -0.16
ARHGEF28-209ENST00000510131 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF28-209ENST00000510131 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
ARHGEF28-209ENST00000510131 SPOCK2Q92563 424 aa14.03□□□□□ -0.16
ARHGEF28-209ENST00000510131 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
ARHGEF28-209ENST00000510131 POTEFA5A3E0 1075 aa14.02□□□□□ -0.17
ARHGEF28-209ENST00000510131 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
ARHGEF28-209ENST00000510131 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
ARHGEF28-209ENST00000510131 SEC24BO95487 1268 aa13.97□□□□□ -0.17
ARHGEF28-209ENST00000510131 IER5LQ5T953 404 aa13.96□□□□□ -0.17
ARHGEF28-209ENST00000510131 COLQQ9Y215 455 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF28-209ENST00000510131 CHRM1P11229 460 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF28-209ENST00000510131 MAMSTRQ6ZN01 415 aa13.95□□□□□ -0.18
ARHGEF28-209ENST00000510131 CIZ1Q9ULV3 898 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF28-209ENST00000510131 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF28-209ENST00000510131 SCUBE2Q9NQ36 999 aa13.89□□□□□ -0.19
ARHGEF28-209ENST00000510131 PLCG2P16885 1265 aa13.83□□□□□ -0.2
ARHGEF28-209ENST00000510131 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF28-209ENST00000510131 PSEN1P49768 467 aa13.8□□□□□ -0.2
ARHGEF28-209ENST00000510131 OCEL1Q9H607 264 aa13.77□□□□□ -0.21
ARHGEF28-209ENST00000510131 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
ARHGEF28-209ENST00000510131 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
ARHGEF28-209ENST00000510131 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
ARHGEF28-209ENST00000510131 MKRN3Q13064 507 aaKnown RBP13.72□□□□□ -0.21
ARHGEF28-209ENST00000510131 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF28-209ENST00000510131 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
ARHGEF28-209ENST00000510131 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
ARHGEF28-209ENST00000510131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.235e-8■■□□□ 13.5
ARHGEF28-209ENST00000510131 POTEMA6NI47 508 aa13.63□□□□□ -0.23
ARHGEF28-209ENST00000510131 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
ARHGEF28-209ENST00000510131 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
ARHGEF28-209ENST00000510131 LCE2DQ5TA82 110 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF28-209ENST00000510131 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
ARHGEF28-209ENST00000510131 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF28-209ENST00000510131 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
ARHGEF28-209ENST00000510131 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF28-209ENST00000510131 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF28-209ENST00000510131 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
ARHGEF28-209ENST00000510131 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
ARHGEF28-209ENST00000510131 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
ARHGEF28-209ENST00000510131 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF28-209ENST00000510131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF28-209ENST00000510131 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF28-209ENST00000510131 G3V3G9 751 aa13.42□□□□□ -0.26
ARHGEF28-209ENST00000510131 ST18O60284 1047 aa13.42□□□□□ -0.26
ARHGEF28-209ENST00000510131 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
ARHGEF28-209ENST00000510131 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF28-209ENST00000510131 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
ARHGEF28-209ENST00000510131 SNPHO15079 494 aa13.4□□□□□ -0.26
ARHGEF28-209ENST00000510131 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
ARHGEF28-209ENST00000510131 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
ARHGEF28-209ENST00000510131 SOX12O15370 315 aa13.37□□□□□ -0.27
ARHGEF28-209ENST00000510131 PKD2Q13563 968 aa13.36□□□□□ -0.27
ARHGEF28-209ENST00000510131 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF28-209ENST00000510131 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
ARHGEF28-209ENST00000510131 TMEM121BQ9BXQ6 578 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF28-209ENST00000510131 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
ARHGEF28-209ENST00000510131 STK24Q9Y6E0 443 aa13.3□□□□□ -0.28
ARHGEF28-209ENST00000510131 RGL2O15211 777 aa13.29□□□□□ -0.28
ARHGEF28-209ENST00000510131 STK25O00506 426 aa13.27□□□□□ -0.29
ARHGEF28-209ENST00000510131 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
ARHGEF28-209ENST00000510131 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
ARHGEF28-209ENST00000510131 NLRP6P59044 892 aa13.24□□□□□ -0.29
ARHGEF28-209ENST00000510131 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
ARHGEF28-209ENST00000510131 FBXO22Q8NEZ5 403 aa13.21□□□□□ -0.29
ARHGEF28-209ENST00000510131 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF28-209ENST00000510131 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
ARHGEF28-209ENST00000510131 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
ARHGEF28-209ENST00000510131 EMP3P54852 163 aa13.15□□□□□ -0.3
ARHGEF28-209ENST00000510131 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
ARHGEF28-209ENST00000510131 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
ARHGEF28-209ENST00000510131 FAM205CA6NFA0 338 aa13.07□□□□□ -0.32
ARHGEF28-209ENST00000510131 HOXB1P14653 301 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms