RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 SPDYE1Q8NFV5 336 aaPredicted RBP17.35■□□□□ 0.37
SPOCK1-207ENST00000509978 RIOK3O14730 519 aaKnown RBP17.34■□□□□ 0.37
SPOCK1-207ENST00000509978 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
SPOCK1-207ENST00000509978 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
SPOCK1-207ENST00000509978 CHRM1P11229 460 aaPredicted RBP17.28■□□□□ 0.36
SPOCK1-207ENST00000509978 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
SPOCK1-207ENST00000509978 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
SPOCK1-207ENST00000509978 FAM212AQ96EL1 285 aa17.25■□□□□ 0.35
SPOCK1-207ENST00000509978 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
SPOCK1-207ENST00000509978 NBR1Q14596 966 aa17.24■□□□□ 0.35
SPOCK1-207ENST00000509978 GTPBP6O43824 516 aaPredicted RBP17.23■□□□□ 0.35
SPOCK1-207ENST00000509978 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
SPOCK1-207ENST00000509978 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
SPOCK1-207ENST00000509978 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
SPOCK1-207ENST00000509978 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
SPOCK1-207ENST00000509978 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
SPOCK1-207ENST00000509978 STK25O00506 426 aa17.15■□□□□ 0.34
SPOCK1-207ENST00000509978 RYDENQ9NUL5 291 aaKnown RBP17.11■□□□□ 0.33
SPOCK1-207ENST00000509978 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
SPOCK1-207ENST00000509978 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
SPOCK1-207ENST00000509978 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
SPOCK1-207ENST00000509978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
SPOCK1-207ENST00000509978 ZFP91Q96JP5 570 aaPredicted RBP17.01■□□□□ 0.31
SPOCK1-207ENST00000509978 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
SPOCK1-207ENST00000509978 STK24Q9Y6E0 443 aa16.99■□□□□ 0.31
SPOCK1-207ENST00000509978 PYGBP11216 843 aa16.92■□□□□ 0.3
SPOCK1-207ENST00000509978 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
SPOCK1-207ENST00000509978 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
SPOCK1-207ENST00000509978 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
SPOCK1-207ENST00000509978 PDAP1Q13442 181 aaKnown RBP16.72■□□□□ 0.27
SPOCK1-207ENST00000509978 WDR70Q9NW82 654 aa16.67■□□□□ 0.26
SPOCK1-207ENST00000509978 TSPYL2Q9H2G4 693 aaPredicted RBP16.65■□□□□ 0.26
SPOCK1-207ENST00000509978 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
SPOCK1-207ENST00000509978 FARP1Q9Y4F1 1045 aaPredicted RBP16.63■□□□□ 0.25
SPOCK1-207ENST00000509978 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
SPOCK1-207ENST00000509978 KCNV2Q8TDN2 545 aa16.6■□□□□ 0.25
SPOCK1-207ENST00000509978 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
SPOCK1-207ENST00000509978 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
SPOCK1-207ENST00000509978 PCDHB8Q9UN66 801 aa16.57■□□□□ 0.24
SPOCK1-207ENST00000509978 PCDHB13Q9Y5F0 798 aa16.57■□□□□ 0.24
SPOCK1-207ENST00000509978 PSEN1P49768 467 aa16.56■□□□□ 0.24
SPOCK1-207ENST00000509978 MFRPQ9BY79 579 aa16.56■□□□□ 0.24
SPOCK1-207ENST00000509978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
SPOCK1-207ENST00000509978 TMEM132AQ24JP5 1023 aa16.53■□□□□ 0.24
SPOCK1-207ENST00000509978 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.24
SPOCK1-207ENST00000509978 LMOD2Q6P5Q4 547 aa16.48■□□□□ 0.23
SPOCK1-207ENST00000509978 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
SPOCK1-207ENST00000509978 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
SPOCK1-207ENST00000509978 SOX12O15370 315 aa16.44■□□□□ 0.22
SPOCK1-207ENST00000509978 NLRP6P59044 892 aa16.43■□□□□ 0.22
SPOCK1-207ENST00000509978 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
SPOCK1-207ENST00000509978 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
SPOCK1-207ENST00000509978 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
SPOCK1-207ENST00000509978 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
SPOCK1-207ENST00000509978 PPP1R37O75864 691 aa16.38■□□□□ 0.21
SPOCK1-207ENST00000509978 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
SPOCK1-207ENST00000509978 IFNL1Q8IU54 200 aa16.38■□□□□ 0.21
SPOCK1-207ENST00000509978 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPOCK1-207ENST00000509978 E2F4Q16254 413 aa16.37■□□□□ 0.21
SPOCK1-207ENST00000509978 EFCAB3Q8N7B9 438 aa16.36■□□□□ 0.21
SPOCK1-207ENST00000509978 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
SPOCK1-207ENST00000509978 MAP3K13O43283 966 aa16.31■□□□□ 0.2
SPOCK1-207ENST00000509978 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
SPOCK1-207ENST00000509978 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
SPOCK1-207ENST00000509978 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
SPOCK1-207ENST00000509978 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
SPOCK1-207ENST00000509978 PDE4AP27815 886 aa16.22■□□□□ 0.19
SPOCK1-207ENST00000509978 ARIH1Q9Y4X5 557 aaPredicted RBP16.22■□□□□ 0.19
SPOCK1-207ENST00000509978 NCKAP5LQ9HCH0 1330 aa16.2■□□□□ 0.18
SPOCK1-207ENST00000509978 SEMA3EO15041 775 aa16.2■□□□□ 0.18
SPOCK1-207ENST00000509978 MFSD10Q14728 455 aa16.2■□□□□ 0.18
SPOCK1-207ENST00000509978 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
SPOCK1-207ENST00000509978 SMYD5Q6GMV2 418 aa16.16■□□□□ 0.18
SPOCK1-207ENST00000509978 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
SPOCK1-207ENST00000509978 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
SPOCK1-207ENST00000509978 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
SPOCK1-207ENST00000509978 CAMK2BQ13554 666 aa16.09■□□□□ 0.17
SPOCK1-207ENST00000509978 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
SPOCK1-207ENST00000509978 ZMYND10O75800 440 aa16.08■□□□□ 0.16
SPOCK1-207ENST00000509978 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.16
SPOCK1-207ENST00000509978 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
SPOCK1-207ENST00000509978 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
SPOCK1-207ENST00000509978 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
SPOCK1-207ENST00000509978 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
SPOCK1-207ENST00000509978 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
SPOCK1-207ENST00000509978 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
SPOCK1-207ENST00000509978 C14orf37Q86TY3 774 aa16■□□□□ 0.15
SPOCK1-207ENST00000509978 TMEM106CQ9BVX2 250 aa15.99■□□□□ 0.15
SPOCK1-207ENST00000509978 ARXQ96QS3 562 aa15.98■□□□□ 0.15
SPOCK1-207ENST00000509978 PHF12Q96QT6 1004 aa15.98■□□□□ 0.15
SPOCK1-207ENST00000509978 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
SPOCK1-207ENST00000509978 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
SPOCK1-207ENST00000509978 ILDR1Q86SU0 546 aaPredicted RBP15.94■□□□□ 0.14
SPOCK1-207ENST00000509978 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
SPOCK1-207ENST00000509978 DAXXQ9UER7 740 aaPredicted RBP15.87■□□□□ 0.13
SPOCK1-207ENST00000509978 PPP1R15BQ5SWA1 713 aa15.86■□□□□ 0.13
SPOCK1-207ENST00000509978 AK7Q96M32 723 aa15.86■□□□□ 0.13
SPOCK1-207ENST00000509978 TIE1P35590 1138 aa15.85■□□□□ 0.13
SPOCK1-207ENST00000509978 MS4A3Q96HJ5 214 aa15.85■□□□□ 0.13
SPOCK1-207ENST00000509978 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms