RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TSPYL2Q9H2G4 693 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC11-206ENST00000509857 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC11-206ENST00000509857 CCDC61Q9Y6R9 512 aa18.6■□□□□ 0.57
TRAPPC11-206ENST00000509857 ECM2O94769 699 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC11-206ENST00000509857 CHRM1P11229 460 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC11-206ENST00000509857 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
TRAPPC11-206ENST00000509857 HAX1O00165 279 aa18.54■□□□□ 0.56
TRAPPC11-206ENST00000509857 ZNF579Q8NAF0 562 aaKnown RBP18.49■□□□□ 0.55
TRAPPC11-206ENST00000509857 PYGBP11216 843 aa18.48■□□□□ 0.55
TRAPPC11-206ENST00000509857 EVX2Q03828 476 aa18.43■□□□□ 0.54
TRAPPC11-206ENST00000509857 RGL2O15211 777 aa18.42■□□□□ 0.54
TRAPPC11-206ENST00000509857 KIF12Q96FN5 646 aa18.41■□□□□ 0.54
TRAPPC11-206ENST00000509857 RNF25Q96BH1 459 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC11-206ENST00000509857 PHF12Q96QT6 1004 aa18.4■□□□□ 0.54
TRAPPC11-206ENST00000509857 SGIP1Q9BQI5 828 aa18.37■□□□□ 0.53
TRAPPC11-206ENST00000509857 MAP3K13O43283 966 aa18.33■□□□□ 0.52
TRAPPC11-206ENST00000509857 RIOK3O14730 519 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-206ENST00000509857 ZNF467Q7Z7K2 595 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-206ENST00000509857 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
TRAPPC11-206ENST00000509857 CLCN6P51797 869 aa18.28■□□□□ 0.52
TRAPPC11-206ENST00000509857 IFNL1Q8IU54 200 aa18.23■□□□□ 0.51
TRAPPC11-206ENST00000509857 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-206ENST00000509857 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
TRAPPC11-206ENST00000509857 MS4A3Q96HJ5 214 aa18.21■□□□□ 0.51
TRAPPC11-206ENST00000509857 PCDHB8Q9UN66 801 aa18.21■□□□□ 0.51
TRAPPC11-206ENST00000509857 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
TRAPPC11-206ENST00000509857 PDAP1Q13442 181 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-206ENST00000509857 GALR2O43603 387 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC11-206ENST00000509857 SP7Q8TDD2 431 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC11-206ENST00000509857 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC11-206ENST00000509857 GABBR2O75899 941 aa18.09■□□□□ 0.49
TRAPPC11-206ENST00000509857 PSEN1P49768 467 aa18.09■□□□□ 0.49
TRAPPC11-206ENST00000509857 ZFP91Q96JP5 570 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC11-206ENST00000509857 HS6ST3Q8IZP7 471 aa18.08■□□□□ 0.48
TRAPPC11-206ENST00000509857 TRPC6Q9Y210 931 aa18.05■□□□□ 0.48
TRAPPC11-206ENST00000509857 CHGAP10645 457 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-206ENST00000509857 STK25O00506 426 aa18.01■□□□□ 0.47
TRAPPC11-206ENST00000509857 TIE1P35590 1138 aa18.01■□□□□ 0.47
TRAPPC11-206ENST00000509857 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-206ENST00000509857 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
TRAPPC11-206ENST00000509857 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
TRAPPC11-206ENST00000509857 BMP2KQ9NSY1 1161 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC11-206ENST00000509857 STK24Q9Y6E0 443 aa17.94■□□□□ 0.46
TRAPPC11-206ENST00000509857 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
TRAPPC11-206ENST00000509857 BBXQ8WY36 941 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC11-206ENST00000509857 ASTLQ6HA08 431 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC11-206ENST00000509857 ATMINO43313 823 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC11-206ENST00000509857 CABP2Q9NPB3 220 aa17.82■□□□□ 0.44
TRAPPC11-206ENST00000509857 DCBLD2Q96PD2 775 aa17.81■□□□□ 0.44
TRAPPC11-206ENST00000509857 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-206ENST00000509857 ATN1P54259 1190 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-206ENST00000509857 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
TRAPPC11-206ENST00000509857 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC11-206ENST00000509857 EFCAB3Q8N7B9 438 aa17.76■□□□□ 0.43
TRAPPC11-206ENST00000509857 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
TRAPPC11-206ENST00000509857 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
TRAPPC11-206ENST00000509857 SOX12O15370 315 aa17.71■□□□□ 0.43
TRAPPC11-206ENST00000509857 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-206ENST00000509857 IER5LQ5T953 404 aa17.68■□□□□ 0.42
TRAPPC11-206ENST00000509857 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-206ENST00000509857 MFRPQ9BY79 579 aa17.68■□□□□ 0.42
TRAPPC11-206ENST00000509857 ILDR1Q86SU0 546 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-206ENST00000509857 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
TRAPPC11-206ENST00000509857 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC11-206ENST00000509857 RYDENQ9NUL5 291 aaKnown RBP17.64■□□□□ 0.41
TRAPPC11-206ENST00000509857 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
TRAPPC11-206ENST00000509857 FBXO22Q8NEZ5 403 aa17.63■□□□□ 0.41
TRAPPC11-206ENST00000509857 NLRP6P59044 892 aa17.61■□□□□ 0.41
TRAPPC11-206ENST00000509857 PAXIP1Q6ZW49 1069 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC11-206ENST00000509857 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
TRAPPC11-206ENST00000509857 SLC39A7Q92504 469 aa17.6■□□□□ 0.41
TRAPPC11-206ENST00000509857 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-206ENST00000509857 C7P10643 843 aa17.56■□□□□ 0.4
TRAPPC11-206ENST00000509857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.47e-6■■■□□ 17.5
TRAPPC11-206ENST00000509857 MS4A4AQ96JQ5 239 aa17.55■□□□□ 0.4
TRAPPC11-206ENST00000509857 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
TRAPPC11-206ENST00000509857 OCEL1Q9H607 264 aa17.52■□□□□ 0.4
TRAPPC11-206ENST00000509857 PDCD7Q8N8D1 485 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-206ENST00000509857 METRNQ9UJH8 293 aa17.51■□□□□ 0.39
TRAPPC11-206ENST00000509857 PLCG2P16885 1265 aa17.46■□□□□ 0.39
TRAPPC11-206ENST00000509857 COLQQ9Y215 455 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-206ENST00000509857 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
TRAPPC11-206ENST00000509857 SEC24BO95487 1268 aa17.43■□□□□ 0.38
TRAPPC11-206ENST00000509857 PPP1R37O75864 691 aa17.42■□□□□ 0.38
TRAPPC11-206ENST00000509857 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
TRAPPC11-206ENST00000509857 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-206ENST00000509857 L3MBTL3Q96JM7 780 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-206ENST00000509857 TSHZ2Q9NRE2 1034 aa17.29■□□□□ 0.36
TRAPPC11-206ENST00000509857 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
TRAPPC11-206ENST00000509857 TMEM121BQ9BXQ6 578 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-206ENST00000509857 BOLA1Q9Y3E2 137 aa17.28■□□□□ 0.36
TRAPPC11-206ENST00000509857 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
TRAPPC11-206ENST00000509857 G3V3G9 751 aa17.19■□□□□ 0.34
TRAPPC11-206ENST00000509857 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
TRAPPC11-206ENST00000509857 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
TRAPPC11-206ENST00000509857 POTEJP0CG39 1038 aa17.14■□□□□ 0.33
TRAPPC11-206ENST00000509857 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
TRAPPC11-206ENST00000509857 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
TRAPPC11-206ENST00000509857 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
TRAPPC11-206ENST00000509857 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms