RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
COL6A4P2-205ENST00000509855 RGL2O15211 777 aa15.86■□□□□ 0.13
COL6A4P2-205ENST00000509855 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
COL6A4P2-205ENST00000509855 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
COL6A4P2-205ENST00000509855 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
COL6A4P2-205ENST00000509855 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
COL6A4P2-205ENST00000509855 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
COL6A4P2-205ENST00000509855 PYGBP11216 843 aa15.78■□□□□ 0.12
COL6A4P2-205ENST00000509855 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
COL6A4P2-205ENST00000509855 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
COL6A4P2-205ENST00000509855 RIOK3O14730 519 aaKnown RBP15.71■□□□□ 0.11
COL6A4P2-205ENST00000509855 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
COL6A4P2-205ENST00000509855 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
COL6A4P2-205ENST00000509855 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
COL6A4P2-205ENST00000509855 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
COL6A4P2-205ENST00000509855 ZNF467Q7Z7K2 595 aaPredicted RBP15.64■□□□□ 0.09
COL6A4P2-205ENST00000509855 HAX1O00165 279 aa15.63■□□□□ 0.09
COL6A4P2-205ENST00000509855 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
COL6A4P2-205ENST00000509855 PHF12Q96QT6 1004 aa15.61■□□□□ 0.09
COL6A4P2-205ENST00000509855 MAP3K13O43283 966 aa15.6■□□□□ 0.09
COL6A4P2-205ENST00000509855 PCDHB13Q9Y5F0 798 aa15.58■□□□□ 0.08
COL6A4P2-205ENST00000509855 HS6ST3Q8IZP7 471 aa15.57■□□□□ 0.08
COL6A4P2-205ENST00000509855 EVX2Q03828 476 aa15.55■□□□□ 0.08
COL6A4P2-205ENST00000509855 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
COL6A4P2-205ENST00000509855 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
COL6A4P2-205ENST00000509855 PCDHB8Q9UN66 801 aa15.54■□□□□ 0.08
COL6A4P2-205ENST00000509855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 PDAP1Q13442 181 aaKnown RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 BBXQ8WY36 941 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 ZFP91Q96JP5 570 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 CLCN6P51797 869 aa15.49■□□□□ 0.07
COL6A4P2-205ENST00000509855 STK25O00506 426 aa15.46■□□□□ 0.07
COL6A4P2-205ENST00000509855 MS4A3Q96HJ5 214 aa15.45■□□□□ 0.06
COL6A4P2-205ENST00000509855 PSEN1P49768 467 aa15.43■□□□□ 0.06
COL6A4P2-205ENST00000509855 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
COL6A4P2-205ENST00000509855 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
COL6A4P2-205ENST00000509855 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
COL6A4P2-205ENST00000509855 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
COL6A4P2-205ENST00000509855 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
COL6A4P2-205ENST00000509855 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
COL6A4P2-205ENST00000509855 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
COL6A4P2-205ENST00000509855 TIE1P35590 1138 aa15.31■□□□□ 0.04
COL6A4P2-205ENST00000509855 GABBR2O75899 941 aa15.27■□□□□ 0.04
COL6A4P2-205ENST00000509855 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
COL6A4P2-205ENST00000509855 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
COL6A4P2-205ENST00000509855 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
COL6A4P2-205ENST00000509855 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
COL6A4P2-205ENST00000509855 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
COL6A4P2-205ENST00000509855 RYDENQ9NUL5 291 aaKnown RBP15.19■□□□□ 0.02
COL6A4P2-205ENST00000509855 EFCAB3Q8N7B9 438 aa15.18■□□□□ 0.02
COL6A4P2-205ENST00000509855 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
COL6A4P2-205ENST00000509855 SOX12O15370 315 aa15.16■□□□□ 0.02
COL6A4P2-205ENST00000509855 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
COL6A4P2-205ENST00000509855 MFRPQ9BY79 579 aa15.14■□□□□ 0.01
COL6A4P2-205ENST00000509855 ATMINO43313 823 aaPredicted RBP15.13■□□□□ 0.01
COL6A4P2-205ENST00000509855 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
COL6A4P2-205ENST00000509855 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
COL6A4P2-205ENST00000509855 ATN1P54259 1190 aaPredicted RBP15.1■□□□□ 0.01
COL6A4P2-205ENST00000509855 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
COL6A4P2-205ENST00000509855 NLRP6P59044 892 aa15.08■□□□□ 0
COL6A4P2-205ENST00000509855 MKRN3Q13064 507 aaKnown RBP15.08■□□□□ 0
COL6A4P2-205ENST00000509855 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
COL6A4P2-205ENST00000509855 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
COL6A4P2-205ENST00000509855 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
COL6A4P2-205ENST00000509855 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
COL6A4P2-205ENST00000509855 IER5LQ5T953 404 aa15.01□□□□□ -0.01
COL6A4P2-205ENST00000509855 MS4A4AQ96JQ5 239 aa14.99□□□□□ -0.01
COL6A4P2-205ENST00000509855 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
COL6A4P2-205ENST00000509855 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
COL6A4P2-205ENST00000509855 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
COL6A4P2-205ENST00000509855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL6A4P2-205ENST00000509855 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
COL6A4P2-205ENST00000509855 PPP1R37O75864 691 aa14.92□□□□□ -0.02
COL6A4P2-205ENST00000509855 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
COL6A4P2-205ENST00000509855 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
COL6A4P2-205ENST00000509855 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
COL6A4P2-205ENST00000509855 OCEL1Q9H607 264 aa14.89□□□□□ -0.03
COL6A4P2-205ENST00000509855 C7P10643 843 aa14.86□□□□□ -0.03
COL6A4P2-205ENST00000509855 PLCG2P16885 1265 aa14.83□□□□□ -0.04
COL6A4P2-205ENST00000509855 KDM2AQ9Y2K7 1162 aa14.83□□□□□ -0.04
COL6A4P2-205ENST00000509855 METRNQ9UJH8 293 aa14.81□□□□□ -0.04
COL6A4P2-205ENST00000509855 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
COL6A4P2-205ENST00000509855 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
COL6A4P2-205ENST00000509855 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
COL6A4P2-205ENST00000509855 SEC24BO95487 1268 aa14.78□□□□□ -0.04
COL6A4P2-205ENST00000509855 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
COL6A4P2-205ENST00000509855 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
COL6A4P2-205ENST00000509855 MICALL2Q8IY33 904 aa14.72□□□□□ -0.05
COL6A4P2-205ENST00000509855 BOLA1Q9Y3E2 137 aa14.72□□□□□ -0.05
COL6A4P2-205ENST00000509855 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.05
COL6A4P2-205ENST00000509855 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
COL6A4P2-205ENST00000509855 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
COL6A4P2-205ENST00000509855 G3V3G9 751 aa14.63□□□□□ -0.07
COL6A4P2-205ENST00000509855 PDE4AP27815 886 aa14.6□□□□□ -0.07
COL6A4P2-205ENST00000509855 MFSD10Q14728 455 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms