RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 CFAP44Q96MT7 982 aa7.45□□□□□ -1.22
CALCOCO2-216ENST00000509784 RASEFQ8IZ41 740 aa7.43□□□□□ -1.22
CALCOCO2-216ENST00000509784 RNF25Q96BH1 459 aaPredicted RBP7.43□□□□□ -1.22
CALCOCO2-216ENST00000509784 CHADLQ6NUI6 762 aa7.4□□□□□ -1.22
CALCOCO2-216ENST00000509784 SPRYD3Q8NCJ5 442 aa7.4□□□□□ -1.22
CALCOCO2-216ENST00000509784 RIOK3O14730 519 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-216ENST00000509784 HS6ST3Q8IZP7 471 aa7.38□□□□□ -1.23
CALCOCO2-216ENST00000509784 VSIG10Q8N0Z9 540 aa7.38□□□□□ -1.23
CALCOCO2-216ENST00000509784 PYGBP11216 843 aa7.36□□□□□ -1.23
CALCOCO2-216ENST00000509784 TAOK2Q9UL54 1235 aa7.36□□□□□ -1.23
CALCOCO2-216ENST00000509784 CHRM1P11229 460 aaPredicted RBP7.35□□□□□ -1.23
CALCOCO2-216ENST00000509784 FARP1Q9Y4F1 1045 aaPredicted RBP7.34□□□□□ -1.23
CALCOCO2-216ENST00000509784 VGFO15240 615 aaPredicted RBP7.33□□□□□ -1.24
CALCOCO2-216ENST00000509784 PRKAR2AP13861 404 aaKnown RBP7.33□□□□□ -1.24
CALCOCO2-216ENST00000509784 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
CALCOCO2-216ENST00000509784 TSHZ2Q9NRE2 1034 aa7.33□□□□□ -1.24
CALCOCO2-216ENST00000509784 STK25O00506 426 aa7.32□□□□□ -1.24
CALCOCO2-216ENST00000509784 KDM2AQ9Y2K7 1162 aa7.32□□□□□ -1.24
CALCOCO2-216ENST00000509784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.29□□□□□ -1.24
CALCOCO2-216ENST00000509784 NKX1-1Q15270 411 aaPredicted RBP7.29□□□□□ -1.24
CALCOCO2-216ENST00000509784 ZFP91Q96JP5 570 aaPredicted RBP7.29□□□□□ -1.24
CALCOCO2-216ENST00000509784 DNAJC5Q9H3Z4 198 aa7.29□□□□□ -1.24
CALCOCO2-216ENST00000509784 FXR2P51116 673 aaKnown RBP eCLIP7.28□□□□□ -1.24
CALCOCO2-216ENST00000509784 STK24Q9Y6E0 443 aa7.28□□□□□ -1.24
CALCOCO2-216ENST00000509784 POTEHQ6S545 545 aa7.27□□□□□ -1.25
CALCOCO2-216ENST00000509784 BCL11BQ9C0K0 894 aaPredicted RBP7.27□□□□□ -1.25
CALCOCO2-216ENST00000509784 CHRDL2Q6WN34 429 aa7.26□□□□□ -1.25
CALCOCO2-216ENST00000509784 BCANQ96GW7 911 aa7.26□□□□□ -1.25
CALCOCO2-216ENST00000509784 SGIP1Q9BQI5 828 aa7.26□□□□□ -1.25
CALCOCO2-216ENST00000509784 GTPBP6O43824 516 aaPredicted RBP7.24□□□□□ -1.25
CALCOCO2-216ENST00000509784 ZNF467Q7Z7K2 595 aaPredicted RBP7.23□□□□□ -1.25
CALCOCO2-216ENST00000509784 PIP4P2Q8N4L2 257 aa7.23□□□□□ -1.25
CALCOCO2-216ENST00000509784 PCDHB8Q9UN66 801 aa7.23□□□□□ -1.25
CALCOCO2-216ENST00000509784 PCDHB13Q9Y5F0 798 aa7.23□□□□□ -1.25
CALCOCO2-216ENST00000509784 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
CALCOCO2-216ENST00000509784 CCDC61Q9Y6R9 512 aa7.22□□□□□ -1.25
CALCOCO2-216ENST00000509784 PDAP1Q13442 181 aaKnown RBP7.19□□□□□ -1.26
CALCOCO2-216ENST00000509784 ZNF579Q8NAF0 562 aaKnown RBP7.17□□□□□ -1.26
CALCOCO2-216ENST00000509784 RYDENQ9NUL5 291 aaKnown RBP7.17□□□□□ -1.26
CALCOCO2-216ENST00000509784 PSEN1P49768 467 aa7.16□□□□□ -1.26
CALCOCO2-216ENST00000509784 MAP3K13O43283 966 aa7.15□□□□□ -1.26
CALCOCO2-216ENST00000509784 IFNL1Q8IU54 200 aa7.15□□□□□ -1.26
CALCOCO2-216ENST00000509784 ZRANB1Q9UGI0 708 aa7.15□□□□□ -1.26
CALCOCO2-216ENST00000509784 KIF12Q96FN5 646 aa7.14□□□□□ -1.27
CALCOCO2-216ENST00000509784 CD44P16070 742 aaKnown RBP7.13□□□□□ -1.27
CALCOCO2-216ENST00000509784 PRKCSHP14314 528 aaPredicted RBP7.11□□□□□ -1.27
CALCOCO2-216ENST00000509784 PHF12Q96QT6 1004 aa7.1□□□□□ -1.27
CALCOCO2-216ENST00000509784 NBR1Q14596 966 aa7.09□□□□□ -1.27
CALCOCO2-216ENST00000509784 MFRPQ9BY79 579 aa7.09□□□□□ -1.27
CALCOCO2-216ENST00000509784 CABP2Q9NPB3 220 aa7.09□□□□□ -1.27
CALCOCO2-216ENST00000509784 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
CALCOCO2-216ENST00000509784 TPRNQ4KMQ1 711 aa7.05□□□□□ -1.28
CALCOCO2-216ENST00000509784 CADPS2Q86UW7 1296 aa7.05□□□□□ -1.28
CALCOCO2-216ENST00000509784 SOX12O15370 315 aa7.04□□□□□ -1.28
CALCOCO2-216ENST00000509784 NLRP6P59044 892 aa7.04□□□□□ -1.28
CALCOCO2-216ENST00000509784 PHF8Q9UPP1 1060 aa7.04□□□□□ -1.28
CALCOCO2-216ENST00000509784 C19orf67A6NJJ6 358 aa7.03□□□□□ -1.28
CALCOCO2-216ENST00000509784 PPP1R37O75864 691 aa7.03□□□□□ -1.28
CALCOCO2-216ENST00000509784 FBXO22Q8NEZ5 403 aa7.02□□□□□ -1.29
CALCOCO2-216ENST00000509784 TMEM106CQ9BVX2 250 aa7.02□□□□□ -1.29
CALCOCO2-216ENST00000509784 WDR70Q9NW82 654 aa7.02□□□□□ -1.29
CALCOCO2-216ENST00000509784 GOLGA2Q08379 1002 aa7.01□□□□□ -1.29
CALCOCO2-216ENST00000509784 MS4A3Q96HJ5 214 aa7.01□□□□□ -1.29
CALCOCO2-216ENST00000509784 TRPC6Q9Y210 931 aa7□□□□□ -1.29
CALCOCO2-216ENST00000509784 P3H3Q8IVL6 736 aa6.97□□□□□ -1.29
CALCOCO2-216ENST00000509784 MKRN3Q13064 507 aaKnown RBP6.96□□□□□ -1.3
CALCOCO2-216ENST00000509784 HAX1O00165 279 aa6.95□□□□□ -1.3
CALCOCO2-216ENST00000509784 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
CALCOCO2-216ENST00000509784 MS4A4AQ96JQ5 239 aa6.95□□□□□ -1.3
CALCOCO2-216ENST00000509784 TTLL13PA6NNM8 815 aa6.93□□□□□ -1.3
CALCOCO2-216ENST00000509784 TIE1P35590 1138 aa6.93□□□□□ -1.3
CALCOCO2-216ENST00000509784 GALR2O43603 387 aaPredicted RBP6.92□□□□□ -1.3
CALCOCO2-216ENST00000509784 EVX2Q03828 476 aa6.91□□□□□ -1.3
CALCOCO2-216ENST00000509784 BMP2KQ9NSY1 1161 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-216ENST00000509784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.9□□□□□ -1.38e-13■■■■■ 52.9
CALCOCO2-216ENST00000509784 NCKAP5LQ9HCH0 1330 aa6.9□□□□□ -1.3
CALCOCO2-216ENST00000509784 PDE4AP27815 886 aa6.89□□□□□ -1.31
CALCOCO2-216ENST00000509784 E2F4Q16254 413 aa6.89□□□□□ -1.31
CALCOCO2-216ENST00000509784 LARP6Q9BRS8 491 aaKnown RBP6.89□□□□□ -1.31
CALCOCO2-216ENST00000509784 TRIM35Q9UPQ4 493 aa6.89□□□□□ -1.31
CALCOCO2-216ENST00000509784 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
CALCOCO2-216ENST00000509784 CLCN6P51797 869 aa6.85□□□□□ -1.31
CALCOCO2-216ENST00000509784 DPY19L2Q6NUT2 758 aa6.85□□□□□ -1.31
CALCOCO2-216ENST00000509784 DDX27Q96GQ7 796 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-216ENST00000509784 CRISPLD2Q9H0B8 497 aa6.85□□□□□ -1.31
CALCOCO2-216ENST00000509784 ATN1P54259 1190 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-216ENST00000509784 MFSD10Q14728 455 aa6.84□□□□□ -1.31
CALCOCO2-216ENST00000509784 ILDR1Q86SU0 546 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-216ENST00000509784 LMOD2Q6P5Q4 547 aa6.82□□□□□ -1.32
CALCOCO2-216ENST00000509784 TULP1O00294 542 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-216ENST00000509784 SEMA3EO15041 775 aa6.81□□□□□ -1.32
CALCOCO2-216ENST00000509784 ATMINO43313 823 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-216ENST00000509784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.81□□□□□ -1.32
CALCOCO2-216ENST00000509784 PDCD7Q8N8D1 485 aaKnown RBP6.8□□□□□ -1.32
CALCOCO2-216ENST00000509784 ASTLQ6HA08 431 aaPredicted RBP6.79□□□□□ -1.32
CALCOCO2-216ENST00000509784 MICALL2Q8IY33 904 aa6.79□□□□□ -1.32
CALCOCO2-216ENST00000509784 GPHNQ9NQX3 736 aaPredicted RBP6.79□□□□□ -1.32
CALCOCO2-216ENST00000509784 IRX5P78411 483 aaPredicted RBP6.78□□□□□ -1.32
CALCOCO2-216ENST00000509784 PPP1R15BQ5SWA1 713 aa6.78□□□□□ -1.32
CALCOCO2-216ENST00000509784 OCEL1Q9H607 264 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms