RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
CCDC30-213ENST00000509712 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
CCDC30-213ENST00000509712 RGL2O15211 777 aa9.67□□□□□ -0.86
CCDC30-213ENST00000509712 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
CCDC30-213ENST00000509712 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
CCDC30-213ENST00000509712 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC30-213ENST00000509712 RASEFQ8IZ41 740 aa9.64□□□□□ -0.87
CCDC30-213ENST00000509712 GSE1Q14687 1217 aa9.63□□□□□ -0.87
CCDC30-213ENST00000509712 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
CCDC30-213ENST00000509712 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
CCDC30-213ENST00000509712 FAM212AQ96EL1 285 aa9.59□□□□□ -0.87
CCDC30-213ENST00000509712 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
CCDC30-213ENST00000509712 CD44P16070 742 aaKnown RBP9.58□□□□□ -0.88
CCDC30-213ENST00000509712 DCAF8Q5TAQ9 597 aa9.56□□□□□ -0.88
CCDC30-213ENST00000509712 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
CCDC30-213ENST00000509712 CHRM1P11229 460 aaPredicted RBP9.53□□□□□ -0.88
CCDC30-213ENST00000509712 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
CCDC30-213ENST00000509712 CLCN6P51797 869 aa9.51□□□□□ -0.89
CCDC30-213ENST00000509712 TSPYL2Q9H2G4 693 aaPredicted RBP9.51□□□□□ -0.89
CCDC30-213ENST00000509712 BBXQ8WY36 941 aaPredicted RBP9.48□□□□□ -0.89
CCDC30-213ENST00000509712 RIOK3O14730 519 aaKnown RBP9.47□□□□□ -0.89
CCDC30-213ENST00000509712 DCBLD2Q96PD2 775 aa9.47□□□□□ -0.89
CCDC30-213ENST00000509712 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.89
CCDC30-213ENST00000509712 PYGBP11216 843 aa9.46□□□□□ -0.9
CCDC30-213ENST00000509712 HS6ST3Q8IZP7 471 aa9.46□□□□□ -0.9
CCDC30-213ENST00000509712 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
CCDC30-213ENST00000509712 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
CCDC30-213ENST00000509712 CHGAP10645 457 aaKnown RBP9.44□□□□□ -0.9
CCDC30-213ENST00000509712 DNAJC5Q9H3Z4 198 aa9.44□□□□□ -0.9
CCDC30-213ENST00000509712 OTUD5Q96G74 571 aa9.42□□□□□ -0.9
CCDC30-213ENST00000509712 SGIP1Q9BQI5 828 aa9.41□□□□□ -0.9
CCDC30-213ENST00000509712 VGFO15240 615 aaPredicted RBP9.41□□□□□ -0.9
CCDC30-213ENST00000509712 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
CCDC30-213ENST00000509712 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
CCDC30-213ENST00000509712 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
CCDC30-213ENST00000509712 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
CCDC30-213ENST00000509712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.36□□□□□ -0.91
CCDC30-213ENST00000509712 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
CCDC30-213ENST00000509712 KIF12Q96FN5 646 aa9.36□□□□□ -0.91
CCDC30-213ENST00000509712 ZFP91Q96JP5 570 aaPredicted RBP9.36□□□□□ -0.91
CCDC30-213ENST00000509712 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-213ENST00000509712 STK25O00506 426 aa9.33□□□□□ -0.92
CCDC30-213ENST00000509712 ZNF467Q7Z7K2 595 aaPredicted RBP9.33□□□□□ -0.92
CCDC30-213ENST00000509712 MAP3K13O43283 966 aa9.33□□□□□ -0.92
CCDC30-213ENST00000509712 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
CCDC30-213ENST00000509712 PCDHB8Q9UN66 801 aa9.32□□□□□ -0.92
CCDC30-213ENST00000509712 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
CCDC30-213ENST00000509712 GALR2O43603 387 aaPredicted RBP9.31□□□□□ -0.92
CCDC30-213ENST00000509712 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
CCDC30-213ENST00000509712 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
CCDC30-213ENST00000509712 CFAP44Q96MT7 982 aa9.3□□□□□ -0.92
CCDC30-213ENST00000509712 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
CCDC30-213ENST00000509712 PDAP1Q13442 181 aaKnown RBP9.28□□□□□ -0.92
CCDC30-213ENST00000509712 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
CCDC30-213ENST00000509712 MS4A3Q96HJ5 214 aa9.27□□□□□ -0.93
CCDC30-213ENST00000509712 GTPBP6O43824 516 aaPredicted RBP9.26□□□□□ -0.93
CCDC30-213ENST00000509712 PSEN1P49768 467 aa9.24□□□□□ -0.93
CCDC30-213ENST00000509712 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
CCDC30-213ENST00000509712 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
CCDC30-213ENST00000509712 POTEB2H3BUK9 544 aa9.21□□□□□ -0.93
CCDC30-213ENST00000509712 TRPC6Q9Y210 931 aa9.21□□□□□ -0.93
CCDC30-213ENST00000509712 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.93
CCDC30-213ENST00000509712 MYT1Q01538 1121 aa9.2□□□□□ -0.94
CCDC30-213ENST00000509712 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
CCDC30-213ENST00000509712 TIE1P35590 1138 aa9.14□□□□□ -0.95
CCDC30-213ENST00000509712 PELP1Q8IZL8 1130 aaKnown RBP9.14□□□□□ -0.95
CCDC30-213ENST00000509712 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
CCDC30-213ENST00000509712 TMEM106CQ9BVX2 250 aa9.13□□□□□ -0.95
CCDC30-213ENST00000509712 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
CCDC30-213ENST00000509712 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
CCDC30-213ENST00000509712 TTLL13PA6NNM8 815 aa9.12□□□□□ -0.95
CCDC30-213ENST00000509712 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
CCDC30-213ENST00000509712 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
CCDC30-213ENST00000509712 METRNQ9UJH8 293 aa9.1□□□□□ -0.95
CCDC30-213ENST00000509712 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
CCDC30-213ENST00000509712 SLC39A7Q92504 469 aa9.09□□□□□ -0.95
CCDC30-213ENST00000509712 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
CCDC30-213ENST00000509712 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
CCDC30-213ENST00000509712 C7P10643 843 aa9.07□□□□□ -0.96
CCDC30-213ENST00000509712 SOX12O15370 315 aa9.07□□□□□ -0.96
CCDC30-213ENST00000509712 ATN1P54259 1190 aaPredicted RBP9.06□□□□□ -0.96
CCDC30-213ENST00000509712 MAMSTRQ6ZN01 415 aa9.06□□□□□ -0.96
CCDC30-213ENST00000509712 PHF8Q9UPP1 1060 aa9.06□□□□□ -0.96
CCDC30-213ENST00000509712 FAM163AQ96GL9 167 aaPredicted RBP9.05□□□□□ -0.96
CCDC30-213ENST00000509712 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
CCDC30-213ENST00000509712 CDAN1Q8IWY9 1227 aa9.04□□□□□ -0.96
CCDC30-213ENST00000509712 MS4A4AQ96JQ5 239 aa9.04□□□□□ -0.96
CCDC30-213ENST00000509712 PPP1R37O75864 691 aa9.03□□□□□ -0.96
CCDC30-213ENST00000509712 NLRP6P59044 892 aa9.03□□□□□ -0.96
CCDC30-213ENST00000509712 ILDR1Q86SU0 546 aaPredicted RBP9.03□□□□□ -0.96
CCDC30-213ENST00000509712 POTEJP0CG39 1038 aa9.02□□□□□ -0.97
CCDC30-213ENST00000509712 GOLGA2Q08379 1002 aa9.02□□□□□ -0.97
CCDC30-213ENST00000509712 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
CCDC30-213ENST00000509712 MKRN3Q13064 507 aaKnown RBP8.99□□□□□ -0.97
CCDC30-213ENST00000509712 TTBK1Q5TCY1 1321 aaPredicted RBP8.99□□□□□ -0.97
CCDC30-213ENST00000509712 SCUBE2Q9NQ36 999 aa8.99□□□□□ -0.97
CCDC30-213ENST00000509712 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
CCDC30-213ENST00000509712 BCANQ96GW7 911 aa8.96□□□□□ -0.97
CCDC30-213ENST00000509712 IER5LQ5T953 404 aa8.95□□□□□ -0.98
CCDC30-213ENST00000509712 IRX5P78411 483 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms