RNA–Protein interactions for RNA: ENST00000509355.5

PDE4D-217, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 847 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-217ENST00000509355 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
PDE4D-217ENST00000509355 POTEIP0CG38 1075 aa15.2■□□□□ 0.02
PDE4D-217ENST00000509355 IFNLR1Q8IU57 520 aaPredicted RBP15.17■□□□□ 0.02
PDE4D-217ENST00000509355 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
PDE4D-217ENST00000509355 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
PDE4D-217ENST00000509355 MS4A3Q96HJ5 214 aa15.1■□□□□ 0.01
PDE4D-217ENST00000509355 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
PDE4D-217ENST00000509355 FAM212AQ96EL1 285 aa15.08■□□□□ 0
PDE4D-217ENST00000509355 MAP3K13O43283 966 aa15.05■□□□□ -0
PDE4D-217ENST00000509355 DCAF8Q5TAQ9 597 aa15□□□□□ -0.01
PDE4D-217ENST00000509355 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
PDE4D-217ENST00000509355 SPOCK2Q92563 424 aa14.99□□□□□ -0.01
PDE4D-217ENST00000509355 ASTLQ6HA08 431 aaPredicted RBP14.95□□□□□ -0.02
PDE4D-217ENST00000509355 TRPC6Q9Y210 931 aa14.95□□□□□ -0.02
PDE4D-217ENST00000509355 GSE1Q14687 1217 aa14.93□□□□□ -0.02
PDE4D-217ENST00000509355 ATMINO43313 823 aaPredicted RBP14.92□□□□□ -0.02
PDE4D-217ENST00000509355 LHX8Q68G74 356 aa14.92□□□□□ -0.02
PDE4D-217ENST00000509355 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
PDE4D-217ENST00000509355 PCDHB13Q9Y5F0 798 aa14.91□□□□□ -0.02
PDE4D-217ENST00000509355 PYGBP11216 843 aa14.88□□□□□ -0.03
PDE4D-217ENST00000509355 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
PDE4D-217ENST00000509355 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
PDE4D-217ENST00000509355 TIE1P35590 1138 aa14.87□□□□□ -0.03
PDE4D-217ENST00000509355 BMP2KQ9NSY1 1161 aaPredicted RBP14.87□□□□□ -0.03
PDE4D-217ENST00000509355 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
PDE4D-217ENST00000509355 TTLL13PA6NNM8 815 aa14.79□□□□□ -0.04
PDE4D-217ENST00000509355 CIZ1Q9ULV3 898 aaPredicted RBP14.77□□□□□ -0.05
PDE4D-217ENST00000509355 PCDHB8Q9UN66 801 aa14.75□□□□□ -0.05
PDE4D-217ENST00000509355 SLC39A7Q92504 469 aa14.74□□□□□ -0.05
PDE4D-217ENST00000509355 C7P10643 843 aa14.73□□□□□ -0.05
PDE4D-217ENST00000509355 POTEB2H3BUK9 544 aa14.71□□□□□ -0.05
PDE4D-217ENST00000509355 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
PDE4D-217ENST00000509355 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
PDE4D-217ENST00000509355 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
PDE4D-217ENST00000509355 POTEFA5A3E0 1075 aa14.67□□□□□ -0.06
PDE4D-217ENST00000509355 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
PDE4D-217ENST00000509355 TRIM35Q9UPQ4 493 aa14.66□□□□□ -0.06
PDE4D-217ENST00000509355 IER5LQ5T953 404 aa14.61□□□□□ -0.07
PDE4D-217ENST00000509355 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
PDE4D-217ENST00000509355 PSEN1P49768 467 aa14.57□□□□□ -0.08
PDE4D-217ENST00000509355 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
PDE4D-217ENST00000509355 RNF25Q96BH1 459 aaPredicted RBP14.55□□□□□ -0.08
PDE4D-217ENST00000509355 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
PDE4D-217ENST00000509355 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
PDE4D-217ENST00000509355 SEC24BO95487 1268 aa14.52□□□□□ -0.09
PDE4D-217ENST00000509355 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
PDE4D-217ENST00000509355 PKD2Q13563 968 aa14.51□□□□□ -0.09
PDE4D-217ENST00000509355 RIOK3O14730 519 aaKnown RBP14.45□□□□□ -0.1
PDE4D-217ENST00000509355 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
PDE4D-217ENST00000509355 OCEL1Q9H607 264 aa14.42□□□□□ -0.1
PDE4D-217ENST00000509355 MAMSTRQ6ZN01 415 aa14.4□□□□□ -0.1
PDE4D-217ENST00000509355 PLCG2P16885 1265 aa14.38□□□□□ -0.11
PDE4D-217ENST00000509355 PDCD7Q8N8D1 485 aaKnown RBP14.38□□□□□ -0.11
PDE4D-217ENST00000509355 VGFO15240 615 aaPredicted RBP14.37□□□□□ -0.11
PDE4D-217ENST00000509355 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
PDE4D-217ENST00000509355 MKRN3Q13064 507 aaKnown RBP14.36□□□□□ -0.11
PDE4D-217ENST00000509355 SCUBE2Q9NQ36 999 aa14.36□□□□□ -0.11
PDE4D-217ENST00000509355 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
PDE4D-217ENST00000509355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.34□□□□□ -0.11
PDE4D-217ENST00000509355 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
PDE4D-217ENST00000509355 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
PDE4D-217ENST00000509355 RGL2O15211 777 aa14.32□□□□□ -0.12
PDE4D-217ENST00000509355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■■■□□ 16.6
PDE4D-217ENST00000509355 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
PDE4D-217ENST00000509355 TAOK2Q9UL54 1235 aa14.23□□□□□ -0.13
PDE4D-217ENST00000509355 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
PDE4D-217ENST00000509355 BCL11BQ9C0K0 894 aaPredicted RBP14.2□□□□□ -0.14
PDE4D-217ENST00000509355 SOX12O15370 315 aa14.18□□□□□ -0.14
PDE4D-217ENST00000509355 L3MBTL3Q96JM7 780 aaPredicted RBP14.18□□□□□ -0.14
PDE4D-217ENST00000509355 FAM163AQ96GL9 167 aaPredicted RBP14.15□□□□□ -0.14
PDE4D-217ENST00000509355 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
PDE4D-217ENST00000509355 STK25O00506 426 aa14.13□□□□□ -0.15
PDE4D-217ENST00000509355 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
PDE4D-217ENST00000509355 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
PDE4D-217ENST00000509355 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
PDE4D-217ENST00000509355 FBXO22Q8NEZ5 403 aa14.1□□□□□ -0.15
PDE4D-217ENST00000509355 TMEM121BQ9BXQ6 578 aaPredicted RBP14.1□□□□□ -0.15
PDE4D-217ENST00000509355 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.08□□□□□ -0.16
PDE4D-217ENST00000509355 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
PDE4D-217ENST00000509355 LCE2DQ5TA82 110 aaPredicted RBP14.07□□□□□ -0.16
PDE4D-217ENST00000509355 MFRPQ9BY79 579 aa14.07□□□□□ -0.16
PDE4D-217ENST00000509355 POTEMA6NI47 508 aa14.03□□□□□ -0.16
PDE4D-217ENST00000509355 NLRP6P59044 892 aa14.03□□□□□ -0.16
PDE4D-217ENST00000509355 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
PDE4D-217ENST00000509355 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
PDE4D-217ENST00000509355 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
PDE4D-217ENST00000509355 G3V3G9 751 aa14□□□□□ -0.17
PDE4D-217ENST00000509355 MICALL2Q8IY33 904 aa13.98□□□□□ -0.17
PDE4D-217ENST00000509355 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
PDE4D-217ENST00000509355 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
PDE4D-217ENST00000509355 TMEM92Q6UXU6 159 aa13.91□□□□□ -0.18
PDE4D-217ENST00000509355 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
PDE4D-217ENST00000509355 SNPHO15079 494 aa13.87□□□□□ -0.19
PDE4D-217ENST00000509355 ST18O60284 1047 aa13.87□□□□□ -0.19
PDE4D-217ENST00000509355 PPP1R37O75864 691 aa13.85□□□□□ -0.19
PDE4D-217ENST00000509355 PLSCR2Q9NRY7 297 aa13.84□□□□□ -0.19
PDE4D-217ENST00000509355 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
PDE4D-217ENST00000509355 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
PDE4D-217ENST00000509355 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
PDE4D-217ENST00000509355 KIF3CO14782 793 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms