RNA–Protein interactions for RNA: ENST00000509219.1

PGM3-209, Transcript of phosphoglucomutase 3, human

TSL 5

Gene PGM3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGM3-209	ENST00000509219	CCDC61	Q9Y6R9	512 aa		13.8	□□□□□ -0.2
PGM3-209	ENST00000509219	SLC39A7	Q92504	469 aa		13.76	□□□□□ -0.21
PGM3-209	ENST00000509219	METRN	Q9UJH8	293 aa		13.76	□□□□□ -0.21
PGM3-209	ENST00000509219	C7	P10643	843 aa		13.75	□□□□□ -0.21
PGM3-209	ENST00000509219	PLEKHG5	O94827	1062 aa		13.73	□□□□□ -0.21
PGM3-209	ENST00000509219	KIF12	Q96FN5	646 aa		13.73	□□□□□ -0.21
PGM3-209	ENST00000509219	MIER1	Q8N108	512 aa		13.71	□□□□□ -0.21
PGM3-209	ENST00000509219	ATN1	P54259	1190 aa	Predicted RBP	13.66	□□□□□ -0.22
PGM3-209	ENST00000509219	RASEF	Q8IZ41	740 aa		13.65	□□□□□ -0.22
PGM3-209	ENST00000509219	POTEJ	P0CG39	1038 aa		13.64	□□□□□ -0.23
PGM3-209	ENST00000509219	MAP3K13	O43283	966 aa		13.62	□□□□□ -0.23
PGM3-209	ENST00000509219	MAMSTR	Q6ZN01	415 aa		13.62	□□□□□ -0.23
PGM3-209	ENST00000509219	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.61	□□□□□ -0.23
PGM3-209	ENST00000509219	TIE1	P35590	1138 aa		13.59	□□□□□ -0.23
PGM3-209	ENST00000509219	PLSCR2	Q9NRY7	297 aa		13.59	□□□□□ -0.23
PGM3-209	ENST00000509219	TRPC6	Q9Y210	931 aa		13.59	□□□□□ -0.23
PGM3-209	ENST00000509219	POTEM	A6NI47	508 aa		13.57	□□□□□ -0.24
PGM3-209	ENST00000509219	PLCD3	Q8N3E9	789 aa		13.57	□□□□□ -0.24
PGM3-209	ENST00000509219	POTEF	A5A3E0	1075 aa		13.53	□□□□□ -0.24
PGM3-209	ENST00000509219	POTEG	Q6S5H5	508 aa		13.53	□□□□□ -0.24
PGM3-209	ENST00000509219	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.53	□□□□□ -0.24
PGM3-209	ENST00000509219	SGIP1	Q9BQI5	828 aa		13.52	□□□□□ -0.25
PGM3-209	ENST00000509219	SCUBE2	Q9NQ36	999 aa		13.5	□□□□□ -0.25
PGM3-209	ENST00000509219	TTLL13P	A6NNM8	815 aa		13.49	□□□□□ -0.25
PGM3-209	ENST00000509219	NUBP1	P53384	320 aa		13.49	□□□□□ -0.25
PGM3-209	ENST00000509219	PCDHB13	Q9Y5F0	798 aa		13.45	□□□□□ -0.26
PGM3-209	ENST00000509219	PCDH10	Q9P2E7	1040 aa		13.42	□□□□□ -0.26
PGM3-209	ENST00000509219	FKBP8	Q14318	412 aa		13.41	□□□□□ -0.26
PGM3-209	ENST00000509219	IER5L	Q5T953	404 aa		13.41	□□□□□ -0.26
PGM3-209	ENST00000509219	COLQ	Q9Y215	455 aa	Predicted RBP	13.41	□□□□□ -0.26
PGM3-209	ENST00000509219	SEC24B	O95487	1268 aa		13.4	□□□□□ -0.26
PGM3-209	ENST00000509219	LCE2D	Q5TA82	110 aa	Predicted RBP	13.4	□□□□□ -0.26
PGM3-209	ENST00000509219	TRIM35	Q9UPQ4	493 aa		13.4	□□□□□ -0.26
PGM3-209	ENST00000509219	FAM212A	Q96EL1	285 aa		13.39	□□□□□ -0.27
PGM3-209	ENST00000509219	IFNL1	Q8IU54	200 aa		13.37	□□□□□ -0.27
PGM3-209	ENST00000509219	FAM163A	Q96GL9	167 aa	Predicted RBP	13.36	□□□□□ -0.27
PGM3-209	ENST00000509219	TMEM106C	Q9BVX2	250 aa		13.3	□□□□□ -0.28
PGM3-209	ENST00000509219	FBXO3	Q9UK99	471 aa		13.25	□□□□□ -0.29
PGM3-209	ENST00000509219	DCAF8	Q5TAQ9	597 aa		13.24	□□□□□ -0.29
PGM3-209	ENST00000509219	PLCG2	P16885	1265 aa		13.22	□□□□□ -0.29
PGM3-209	ENST00000509219	IRX5	P78411	483 aa	Predicted RBP	13.21	□□□□□ -0.29
PGM3-209	ENST00000509219	PYGB	P11216	843 aa		13.19	□□□□□ -0.3
PGM3-209	ENST00000509219	SLAIN1	Q8ND83	568 aa		13.17	□□□□□ -0.3
PGM3-209	ENST00000509219	OCEL1	Q9H607	264 aa		13.13	□□□□□ -0.31
PGM3-209	ENST00000509219	PCDHB8	Q9UN66	801 aa		13.13	□□□□□ -0.31
PGM3-209	ENST00000509219	ST18	O60284	1047 aa		13.08	□□□□□ -0.32
PGM3-209	ENST00000509219	VASP	P50552	380 aa	Predicted RBP	13.08	□□□□□ -0.32
PGM3-209	ENST00000509219	GSE1	Q14687	1217 aa		13.08	□□□□□ -0.32
PGM3-209	ENST00000509219	CDAN1	Q8IWY9	1227 aa		13.07	□□□□□ -0.32
PGM3-209	ENST00000509219	KLHL34	Q8N239	644 aa		13.05	□□□□□ -0.32
PGM3-209	ENST00000509219	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.04	□□□□□ -0.32
PGM3-209	ENST00000509219	CHRM1	P11229	460 aa	Predicted RBP	13.02	□□□□□ -0.33
PGM3-209	ENST00000509219	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.01	□□□□□ -0.33
PGM3-209	ENST00000509219	PDCD7	Q8N8D1	485 aa	Known RBP	12.98	□□□□□ -0.33
PGM3-209	ENST00000509219	SNPH	O15079	494 aa		12.97	□□□□□ -0.33
PGM3-209	ENST00000509219	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.97	□□□□□ -0.33
PGM3-209	ENST00000509219	MKRN3	Q13064	507 aa	Known RBP	12.95	□□□□□ -0.34
PGM3-209	ENST00000509219	GOLGA2	Q08379	1002 aa		12.93	□□□□□ -0.34
PGM3-209	ENST00000509219	PSEN1	P49768	467 aa		12.91	□□□□□ -0.34
PGM3-209	ENST00000509219	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.91	□□□□□ -0.34
PGM3-209	ENST00000509219	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.88	□□□□□ -0.35	1e-6	■■■□□ 16.5
PGM3-209	ENST00000509219	C3orf67	Q6ZVT6	689 aa		12.87	□□□□□ -0.35
PGM3-209	ENST00000509219	ILDR1	Q86SU0	546 aa	Predicted RBP	12.86	□□□□□ -0.35
PGM3-209	ENST00000509219	PDAP1	Q13442	181 aa	Known RBP	12.85	□□□□□ -0.35
PGM3-209	ENST00000509219	SPOCK2	Q92563	424 aa		12.84	□□□□□ -0.35
PGM3-209	ENST00000509219	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.82	□□□□□ -0.36
PGM3-209	ENST00000509219	MARVELD3	Q96A59	401 aa		12.81	□□□□□ -0.36
PGM3-209	ENST00000509219	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.78	□□□□□ -0.36
PGM3-209	ENST00000509219	SPNS2	Q8IVW8	549 aa		12.76	□□□□□ -0.37
PGM3-209	ENST00000509219	CABP2	Q9NPB3	220 aa		12.75	□□□□□ -0.37
PGM3-209	ENST00000509219	MMRN1	Q13201	1228 aa		12.74	□□□□□ -0.37
PGM3-209	ENST00000509219	DPY19L2	Q6NUT2	758 aa		12.73	□□□□□ -0.37
PGM3-209	ENST00000509219	EMP3	P54852	163 aa		12.72	□□□□□ -0.37
PGM3-209	ENST00000509219	BOLA1	Q9Y3E2	137 aa		12.7	□□□□□ -0.38
PGM3-209	ENST00000509219		G3V3G9	751 aa		12.67	□□□□□ -0.38
PGM3-209	ENST00000509219	TRIM41	Q8WV44	630 aa		12.65	□□□□□ -0.38
PGM3-209	ENST00000509219	HS3ST6	Q96QI5	342 aa		12.65	□□□□□ -0.38
PGM3-209	ENST00000509219	POTEB3	A0JP26	581 aa		12.63	□□□□□ -0.39
PGM3-209	ENST00000509219	FAM205C	A6NFA0	338 aa		12.63	□□□□□ -0.39
PGM3-209	ENST00000509219	POTEB	Q6S5H4	581 aa		12.63	□□□□□ -0.39
PGM3-209	ENST00000509219	HOXB3	P14651	431 aa	Predicted RBP	12.61	□□□□□ -0.39
PGM3-209	ENST00000509219	KRTAP3-3	Q9BYR6	98 aa		12.61	□□□□□ -0.39
PGM3-209	ENST00000509219	KRTAP3-2	Q9BYR7	98 aa		12.61	□□□□□ -0.39
PGM3-209	ENST00000509219	EFCAB3	Q8N7B9	438 aa		12.58	□□□□□ -0.4
PGM3-209	ENST00000509219	HOXB1	P14653	301 aa	Predicted RBP	12.55	□□□□□ -0.4
PGM3-209	ENST00000509219	DOK7	Q18PE1	504 aa		12.53	□□□□□ -0.4
PGM3-209	ENST00000509219	ZNF710	Q8N1W2	664 aa		12.53	□□□□□ -0.4
PGM3-209	ENST00000509219	SOX12	O15370	315 aa		12.48	□□□□□ -0.41
PGM3-209	ENST00000509219	RIOK3	O14730	519 aa	Known RBP	12.47	□□□□□ -0.41
PGM3-209	ENST00000509219	MICALL2	Q8IY33	904 aa		12.47	□□□□□ -0.41
PGM3-209	ENST00000509219	RIMBP2	O15034	1052 aa		12.46	□□□□□ -0.41
PGM3-209	ENST00000509219	RNF25	Q96BH1	459 aa	Predicted RBP	12.45	□□□□□ -0.42
PGM3-209	ENST00000509219	ERBB3	P21860	1342 aa		12.44	□□□□□ -0.42
PGM3-209	ENST00000509219	TMEM92	Q6UXU6	159 aa		12.44	□□□□□ -0.42
PGM3-209	ENST00000509219	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.42	□□□□□ -0.42
PGM3-209	ENST00000509219	VGF	O15240	615 aa	Predicted RBP	12.42	□□□□□ -0.42
PGM3-209	ENST00000509219	ZFP91	Q96JP5	570 aa	Predicted RBP	12.42	□□□□□ -0.42
PGM3-209	ENST00000509219	MS4A4A	Q96JQ5	239 aa		12.42	□□□□□ -0.42
PGM3-209	ENST00000509219	ZSWIM6	Q9HCJ5	1215 aa		12.42	□□□□□ -0.42
PGM3-209	ENST00000509219	PHF8	Q9UPP1	1060 aa		12.38	□□□□□ -0.43

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