RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
LINC01088-205ENST00000509088 NUBP1P53384 320 aa15.84■□□□□ 0.13
LINC01088-205ENST00000509088 KIF12Q96FN5 646 aa15.83■□□□□ 0.12
LINC01088-205ENST00000509088 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
LINC01088-205ENST00000509088 ASTLQ6HA08 431 aaPredicted RBP15.76■□□□□ 0.11
LINC01088-205ENST00000509088 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
LINC01088-205ENST00000509088 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
LINC01088-205ENST00000509088 MAP3K13O43283 966 aa15.73■□□□□ 0.11
LINC01088-205ENST00000509088 ATMINO43313 823 aaPredicted RBP15.73■□□□□ 0.11
LINC01088-205ENST00000509088 TRPC6Q9Y210 931 aa15.73■□□□□ 0.11
LINC01088-205ENST00000509088 POTEB2H3BUK9 544 aa15.69■□□□□ 0.1
LINC01088-205ENST00000509088 VASPP50552 380 aaPredicted RBP15.66■□□□□ 0.1
LINC01088-205ENST00000509088 ATN1P54259 1190 aaPredicted RBP15.63■□□□□ 0.09
LINC01088-205ENST00000509088 BMP2KQ9NSY1 1161 aaPredicted RBP15.63■□□□□ 0.09
LINC01088-205ENST00000509088 FAM212AQ96EL1 285 aa15.6■□□□□ 0.09
LINC01088-205ENST00000509088 METRNQ9UJH8 293 aa15.58■□□□□ 0.08
LINC01088-205ENST00000509088 TIE1P35590 1138 aa15.55■□□□□ 0.08
LINC01088-205ENST00000509088 SLC39A7Q92504 469 aa15.55■□□□□ 0.08
LINC01088-205ENST00000509088 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
LINC01088-205ENST00000509088 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
LINC01088-205ENST00000509088 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
LINC01088-205ENST00000509088 C7P10643 843 aa15.53■□□□□ 0.08
LINC01088-205ENST00000509088 IFNL1Q8IU54 200 aa15.53■□□□□ 0.08
LINC01088-205ENST00000509088 TTLL13PA6NNM8 815 aa15.51■□□□□ 0.07
LINC01088-205ENST00000509088 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
LINC01088-205ENST00000509088 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
LINC01088-205ENST00000509088 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
LINC01088-205ENST00000509088 PYGBP11216 843 aa15.45■□□□□ 0.06
LINC01088-205ENST00000509088 IFNLR1Q8IU57 520 aaPredicted RBP15.44■□□□□ 0.06
LINC01088-205ENST00000509088 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
LINC01088-205ENST00000509088 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
LINC01088-205ENST00000509088 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
LINC01088-205ENST00000509088 TMEM106CQ9BVX2 250 aa15.34■□□□□ 0.05
LINC01088-205ENST00000509088 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
LINC01088-205ENST00000509088 GSE1Q14687 1217 aa15.33■□□□□ 0.04
LINC01088-205ENST00000509088 IER5LQ5T953 404 aa15.3■□□□□ 0.04
LINC01088-205ENST00000509088 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
LINC01088-205ENST00000509088 CHRM1P11229 460 aaPredicted RBP15.26■□□□□ 0.03
LINC01088-205ENST00000509088 SEC24BO95487 1268 aa15.21■□□□□ 0.03
LINC01088-205ENST00000509088 MAMSTRQ6ZN01 415 aa15.21■□□□□ 0.03
LINC01088-205ENST00000509088 IRX5P78411 483 aaPredicted RBP15.2■□□□□ 0.02
LINC01088-205ENST00000509088 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
LINC01088-205ENST00000509088 SCUBE2Q9NQ36 999 aa15.16■□□□□ 0.02
LINC01088-205ENST00000509088 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
LINC01088-205ENST00000509088 PLCG2P16885 1265 aa15.09■□□□□ 0.01
LINC01088-205ENST00000509088 LCE2DQ5TA82 110 aaPredicted RBP15.09■□□□□ 0.01
LINC01088-205ENST00000509088 PSEN1P49768 467 aa15.08■□□□□ 0
LINC01088-205ENST00000509088 OCEL1Q9H607 264 aa15.06■□□□□ 0
LINC01088-205ENST00000509088 PDCD7Q8N8D1 485 aaKnown RBP15.03■□□□□ -0
LINC01088-205ENST00000509088 PDAP1Q13442 181 aaKnown RBP15.01□□□□□ -0.01
LINC01088-205ENST00000509088 POTEMA6NI47 508 aa14.99□□□□□ -0.01
LINC01088-205ENST00000509088 POTEGQ6S5H5 508 aa14.97□□□□□ -0.01
LINC01088-205ENST00000509088 ILDR1Q86SU0 546 aaPredicted RBP14.95□□□□□ -0.02
LINC01088-205ENST00000509088 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
LINC01088-205ENST00000509088 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
LINC01088-205ENST00000509088 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
LINC01088-205ENST00000509088 RNF25Q96BH1 459 aaPredicted RBP14.91□□□□□ -0.02
LINC01088-205ENST00000509088 FAM163AQ96GL9 167 aaPredicted RBP14.91□□□□□ -0.02
LINC01088-205ENST00000509088 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
LINC01088-205ENST00000509088 CABP2Q9NPB3 220 aa14.89□□□□□ -0.03
LINC01088-205ENST00000509088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.89□□□□□ -0.03
LINC01088-205ENST00000509088 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
LINC01088-205ENST00000509088 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
LINC01088-205ENST00000509088 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.79□□□□□ -0.04
LINC01088-205ENST00000509088 EFCAB3Q8N7B9 438 aa14.77□□□□□ -0.05
LINC01088-205ENST00000509088 L3MBTL3Q96JM7 780 aaPredicted RBP14.77□□□□□ -0.05
LINC01088-205ENST00000509088 ST18O60284 1047 aa14.75□□□□□ -0.05
LINC01088-205ENST00000509088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.74□□□□□ -0.05
LINC01088-205ENST00000509088 ZFP91Q96JP5 570 aaPredicted RBP14.74□□□□□ -0.05
LINC01088-205ENST00000509088 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
LINC01088-205ENST00000509088 VGFO15240 615 aaPredicted RBP14.7□□□□□ -0.06
LINC01088-205ENST00000509088 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
LINC01088-205ENST00000509088 BOLA1Q9Y3E2 137 aa14.67□□□□□ -0.06
LINC01088-205ENST00000509088 PCDH10Q9P2E7 1040 aa14.66□□□□□ -0.06
LINC01088-205ENST00000509088 PKD2Q13563 968 aa14.65□□□□□ -0.06
LINC01088-205ENST00000509088 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
LINC01088-205ENST00000509088 MS4A4AQ96JQ5 239 aa14.63□□□□□ -0.07
LINC01088-205ENST00000509088 SNPHO15079 494 aa14.59□□□□□ -0.07
LINC01088-205ENST00000509088 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
LINC01088-205ENST00000509088 SOX12O15370 315 aa14.58□□□□□ -0.08
LINC01088-205ENST00000509088 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
LINC01088-205ENST00000509088 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
LINC01088-205ENST00000509088 RGL2O15211 777 aa14.55□□□□□ -0.08
LINC01088-205ENST00000509088 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
LINC01088-205ENST00000509088 MICALL2Q8IY33 904 aa14.53□□□□□ -0.08
LINC01088-205ENST00000509088 TMEM92Q6UXU6 159 aa14.52□□□□□ -0.09
LINC01088-205ENST00000509088 MARVELD3Q96A59 401 aa14.52□□□□□ -0.09
LINC01088-205ENST00000509088 G3V3G9 751 aa14.51□□□□□ -0.09
LINC01088-205ENST00000509088 HOXB3P14651 431 aaPredicted RBP14.51□□□□□ -0.09
LINC01088-205ENST00000509088 FBXO22Q8NEZ5 403 aa14.51□□□□□ -0.09
LINC01088-205ENST00000509088 STK24Q9Y6E0 443 aa14.49□□□□□ -0.09
LINC01088-205ENST00000509088 MFRPQ9BY79 579 aa14.46□□□□□ -0.09
LINC01088-205ENST00000509088 STK25O00506 426 aa14.45□□□□□ -0.1
LINC01088-205ENST00000509088 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
LINC01088-205ENST00000509088 POTEB3A0JP26 581 aa14.42□□□□□ -0.1
LINC01088-205ENST00000509088 POTEBQ6S5H4 581 aa14.42□□□□□ -0.1
LINC01088-205ENST00000509088 NLRP6P59044 892 aa14.41□□□□□ -0.1
LINC01088-205ENST00000509088 EMP3P54852 163 aa14.38□□□□□ -0.11
LINC01088-205ENST00000509088 HOXB1P14653 301 aaPredicted RBP14.31□□□□□ -0.12
LINC01088-205ENST00000509088 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms